GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000463-TA|BGIBMGA000463-PA|undefined
         (114 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   2.7  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   2.7  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   2.7  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    20   8.3  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    20   8.3  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    20   8.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    20   8.3  

>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
          protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 19 YNDQSVQVFGLDTGSIVVTLAEGLLDEGRC 48
          Y+D  +    L  G I+    + +LDEG C
Sbjct: 25 YDDMDIDRI-LQNGRILTNYIKCMLDEGPC 53


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 13  TWGYQIYNDQSVQVFGLDTGSI 34
           T  Y+I+ D   +++ LDTG+I
Sbjct: 128 TTAYRIHADSCDRLWVLDTGTI 149


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
          protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 19 YNDQSVQVFGLDTGSIVVTLAEGLLDEGRC 48
          Y+D  +    L  G I+    + +LDEG C
Sbjct: 25 YDDMDIDRI-LQNGRILTNYIKCMLDEGPC 53


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
          protein.
          Length = 130

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query: 42 LLDEGRCMITDN 53
          L+DEGRC    N
Sbjct: 51 LMDEGRCTAEGN 62


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
          protein.
          Length = 130

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query: 42 LLDEGRCMITDN 53
          L+DEGRC    N
Sbjct: 51 LMDEGRCTAEGN 62


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
          protein 3c precursor protein.
          Length = 130

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query: 42 LLDEGRCMITDN 53
          L+DEGRC    N
Sbjct: 51 LMDEGRCTAEGN 62


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 30  DTGSIVVTLAEGLLDEGR 47
           D GSIV  + EG ++  R
Sbjct: 134 DVGSIVYVMEEGKVEVSR 151


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,461
Number of Sequences: 429
Number of extensions: 1300
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 114
length of database: 140,377
effective HSP length: 50
effective length of query: 64
effective length of database: 118,927
effective search space:  7611328
effective search space used:  7611328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.9 bits)
S2: 39 (19.8 bits)