Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000462-TA|BGIBMGA000462-PA|IPR009832|Protein of unknown
function DUF1397
         (227 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   4.1  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   5.4  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    21   9.4  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    21   9.4  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 156 TCFLNLKQSFPTVESANNLSLVEKCAK 182
           T  LN+ +SF  + +AN  S+VEK  K
Sbjct: 144 TFHLNVLKSFIDLFNANARSVVEKMRK 170


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 104 CVGNEYANHINDAQNSTNQLIDFVCYKD 131
           C+G    N I+DA    NQ    +C ++
Sbjct: 70  CIGYYKLNKIHDAYKDLNQRYGALCKEE 97


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 148 QQKTENLKTCFLNLKQSFPTVESANNLSLVE 178
           +Q+T++L   F  L++  PT+ S + LS ++
Sbjct: 263 RQRTQSLNEAFAALRKIIPTLPS-DKLSKIQ 292


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 5/23 (21%), Positives = 15/23 (65%)

Query: 144 PECFQQKTENLKTCFLNLKQSFP 166
           P+C  ++T  +K    ++++++P
Sbjct: 81  PQCSPEETRQIKKVLSHIQRTYP 103


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 5/23 (21%), Positives = 15/23 (65%)

Query: 144 PECFQQKTENLKTCFLNLKQSFP 166
           P+C  ++T  +K    ++++++P
Sbjct: 81  PQCSPEETRQIKKVLSHIQRTYP 103


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.131    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,731
Number of Sequences: 429
Number of extensions: 2441
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 5
length of query: 227
length of database: 140,377
effective HSP length: 56
effective length of query: 171
effective length of database: 116,353
effective search space: 19896363
effective search space used: 19896363
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)