Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000462-TA|BGIBMGA000462-PA|IPR009832|Protein of unknown
function DUF1397
(227 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23647-8|AAK29993.1| 54|Caenorhabditis elegans Hypothetical pr... 30 1.2
L07144-2|AAK21439.1| 54|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 29 2.7
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 29 2.7
Z99280-1|CAB16499.1| 225|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL032626-10|CAA21531.1| 458|Caenorhabditis elegans Hypothetical... 29 3.6
AF039716-2|AAB96737.1| 462|Caenorhabditis elegans Hypothetical ... 29 3.6
U64837-2|AAB04836.3| 213|Caenorhabditis elegans Hypothetical pr... 28 6.3
AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical ... 28 6.3
AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode poly... 27 8.4
AF106582-2|AAC78213.1| 457|Caenorhabditis elegans Hypothetical ... 27 8.4
AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode poly... 27 8.4
AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode poly... 27 8.4
AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protei... 27 8.4
AF016427-2|AAB65352.1| 54|Caenorhabditis elegans Hypothetical ... 27 8.4
>L23647-8|AAK29993.1| 54|Caenorhabditis elegans Hypothetical
protein ZC262.5 protein.
Length = 54
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 12 AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 49
AAG+ +SQI A V QCTK A K P +A L+T
Sbjct: 6 AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41
>L07144-2|AAK21439.1| 54|Caenorhabditis elegans Hypothetical
protein R05D3.6 protein.
Length = 54
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 12 AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 49
AAG+ +SQI A V QCTK A K P +A L+T
Sbjct: 6 AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 112 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 143
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 112 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 143
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 112 HINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 143
++ DA N T +LID K+GD +A+ +A G
Sbjct: 66 NVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97
>Z99280-1|CAB16499.1| 225|Caenorhabditis elegans Hypothetical
protein Y57G11B.5 protein.
Length = 225
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Query: 2 MWKTVLITIFAAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLVDLN 61
M+K+++ + A +A S +T + AED P A R F C K + + +
Sbjct: 1 MFKSLVFSALLAYAVAAPMSSMTTAIDRIDQIFQAEDSTPACNAETRRFNACFKDINEKS 60
Query: 62 VLKTEIEEAKPNGALDEVFKKYCDKSAQLK 91
L+ ++ + EV + D LK
Sbjct: 61 RLEM-FQDVTKFPSKSEVLESVADIRKALK 89
>AL032626-10|CAA21531.1| 458|Caenorhabditis elegans Hypothetical
protein Y37D8A.12a protein.
Length = 458
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Query: 145 ECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEECSTPTPAN 204
E ++K L T NL P ++ A L + EK K T K TP +
Sbjct: 374 ESSKRKAPKLSTDLTNL---VPLLQQAQMLPVTEKATKEKLQTP---KQSPMPGTPENTS 427
Query: 205 MAESLIKFMRKDSPCHTALPK 225
+ SLIK +K+S A P+
Sbjct: 428 LPPSLIKKKKKESTSEQAAPE 448
>AF039716-2|AAB96737.1| 462|Caenorhabditis elegans Hypothetical
protein W03G9.3 protein.
Length = 462
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Query: 145 ECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEECSTPTPAN 204
E ++K L T NL P ++ A L + EK K T K TP +
Sbjct: 378 ESSKRKAPKLSTDLTNL---VPLLQQAQMLPVTEKATKEKLQTP---KQSPMPGTPENTS 431
Query: 205 MAESLIKFMRKDSPCHTALPK 225
+ SLIK +K+S A P+
Sbjct: 432 LPPSLIKKKKKESTSEQAAPE 452
>U64837-2|AAB04836.3| 213|Caenorhabditis elegans Hypothetical
protein T27E4.5 protein.
Length = 213
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 140 AEGGPECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEEC 197
A PE ++KTE KTC L+ ++ +++ V+ C K D+ C+ ++++C
Sbjct: 132 ANHSPE-IERKTEEFKTCPSQLQMAYFCQKTSTARKTVKPC-KTDQ--DCMFSNVQKC 185
>AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical
protein Y22D7AL.4 protein.
Length = 451
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 41 PEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPN 73
PE E +RT G+ G++D+N + + A+PN
Sbjct: 64 PEFEVEIRTNGHIYAGILDINGAEPGDKGAEPN 96
>AY519856-1|AAR89637.1| 1440|Caenorhabditis elegans nematode
polyprotein allergen related,post-translationnally
cleaved, the diverse 14.5 kDa cleavageproducts bind
lipids and retinol (164.6 kD) protein.
Length = 1440
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 16 LADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGA 75
L ++F V + + DKV ++A G +K +VD + + K G
Sbjct: 696 LKEEFKGKCRVFFTPLMTSEELDKVKTLKANKEAAGALMKTVVDRQSGEVKATAEKMLGV 755
Query: 76 LDEVFKKYCDKSAQLKGCISSVLQGVRP 103
EV+K+ K +++ +Q + P
Sbjct: 756 CGEVYKESSRKRREIEAAFKDFVQWMTP 783
>AF106582-2|AAC78213.1| 457|Caenorhabditis elegans Hypothetical
protein W05F2.2 protein.
Length = 457
Score = 27.5 bits (58), Expect = 8.4
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 145 ECFQQKTENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEECSTPTPAN 204
E ++K L T NL P + A L + EK K T K TP
Sbjct: 373 ESSKRKAPKLSTDLTNL---VPLLHQAQMLPVTEKATKEKLQTP---KQSPMPGTPENTT 426
Query: 205 MAESLIKFMRKDSPCHTALPK 225
+ SLIK +K+S A P+
Sbjct: 427 LPPSLIKKKKKESTSEQAAPE 447
>AF106581-2|AAR25643.1| 1198|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform c
protein.
Length = 1198
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 16 LADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGA 75
L ++F V + + DKV ++A G +K +VD + + K G
Sbjct: 454 LKEEFKGKCRVFFTPLMTSEELDKVKTLKANKEAAGALMKTVVDRQSGEVKATAEKMLGV 513
Query: 76 LDEVFKKYCDKSAQLKGCISSVLQGVRP 103
EV+K+ K +++ +Q + P
Sbjct: 514 CGEVYKESSRKRREIEAAFKDFVQWMTP 541
>AF106581-1|AAC78208.1| 1440|Caenorhabditis elegans Nematode
polyprotein allergen relatedprotein 1, isoform a
protein.
Length = 1440
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 16 LADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGA 75
L ++F V + + DKV ++A G +K +VD + + K G
Sbjct: 696 LKEEFKGKCRVFFTPLMTSEELDKVKTLKANKEAAGALMKTVVDRQSGEVKATAEKMLGV 755
Query: 76 LDEVFKKYCDKSAQLKGCISSVLQGVRP 103
EV+K+ K +++ +Q + P
Sbjct: 756 CGEVYKESSRKRREIEAAFKDFVQWMTP 783
>AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protein
protein.
Length = 1198
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 16 LADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGA 75
L ++F V + + DKV ++A G +K +VD + + K G
Sbjct: 453 LKEEFKGKCRVFFTPLMTSEELDKVKTLKANKEAAGALMKTVVDRQSGEVKATAEKMLGV 512
Query: 76 LDEVFKKYCDKSAQLKGCISSVLQGVRP 103
EV+K+ K +++ +Q + P
Sbjct: 513 CGEVYKESSRKRREIEAAFKDFVQWMTP 540
>AF016427-2|AAB65352.1| 54|Caenorhabditis elegans Hypothetical
protein F32D1.2 protein.
Length = 54
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 12 AAGVLADDFSQITAVVTSQCTK---NNAEDKVPEVEAALRTFGN 52
AAG+ +SQI A +T +CTK A K PE + T+ N
Sbjct: 6 AAGLNYVRYSQIAAEITRKCTKQVGGKAAVKKPEATLKITTWEN 49
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.131 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,751,504
Number of Sequences: 27539
Number of extensions: 233595
Number of successful extensions: 710
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 695
Number of HSP's gapped (non-prelim): 20
length of query: 227
length of database: 12,573,161
effective HSP length: 79
effective length of query: 148
effective length of database: 10,397,580
effective search space: 1538841840
effective search space used: 1538841840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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