GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000461-TA|BGIBMGA000461-PA|undefined
         (377 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         27   0.64 
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    26   1.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.4  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   6.0  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 27.5 bits (58), Expect = 0.64
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 163 QQMVRPM-QSGVKRPRSPSPTYALYAHRL-HQPPMKHQPVYSDHK 205
           QQM++PM Q  + R +   P     + +  H+ P ++ P Y  HK
Sbjct: 290 QQMMKPMLQRHLTRNKRSQPARKRKSSKTDHRHPFQYHPTYDQHK 334


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 157 LNKQHGQQMVRPMQSGVKRPRSP--SPTYALYA-HRLHQPPMKHQPVYSDHKVEDGRMG 212
           +N  H +++  P+   V  PR    +P ++L   H++++P M H   YS+    +  MG
Sbjct: 136 INPYHYKRVESPVLPPVLVPRHSEFAPGHSLLPFHQMNEPNMPHNVNYSNTGFNNSHMG 194


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 5/55 (9%)

Query: 317 SDAHPSVSSGVAYQPPV---SRHLSIHPQQHNNMQGPKPGSITQGYPVQQSNQNP 368
           S A P   S ++   PV   S HL  H   H+  Q P PGS        Q +Q+P
Sbjct: 796 SKAPPHPHSALSSHSPVGAGSHHL--HHLHHHAAQQPPPGSHPGAQTQPQLSQHP 848


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)

Query: 188 HRLHQPPMKHQPVYSDH 204
           H  HQP  +HQ  Y  H
Sbjct: 313 HHQHQPQQQHQQQYHSH 329


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.131    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 268,048
Number of Sequences: 2123
Number of extensions: 8606
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 4
length of query: 377
length of database: 516,269
effective HSP length: 65
effective length of query: 312
effective length of database: 378,274
effective search space: 118021488
effective search space used: 118021488
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)