GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000460-TA|BGIBMGA000460-PA|undefined
         (160 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    27   0.21 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   1.5  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    22   8.1  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 27.5 bits (58), Expect = 0.21
 Identities = 19/73 (26%), Positives = 30/73 (41%)

Query: 60  ESAEAEPRDELTDWELPESSDESTDLPSLGLLSTASAEPLSDSDLAFLRGRGVSGQSAGR 119
           E  + E R E T+ E+ E S  + +L S  L  T     L  +   F     +    A +
Sbjct: 95  EIIDLEARLEKTENEILELSQNAVNLKSNYLELTELKHVLERTQSFFFEQEVIVSTDAAK 154

Query: 120 GNIVCPGPTLGES 132
            N++   PT  +S
Sbjct: 155 SNLIAEDPTAAQS 167


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 108 RGRGVSGQSAGRGNIVCPG 126
           RG    G SAGR  ++C G
Sbjct: 234 RGLSTGGPSAGRQRVICAG 252


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 128 TLGESWPPQGVPGLSIR 144
           T  +S PP  +P LS+R
Sbjct: 290 TTKKSTPPNAIPALSVR 306


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.139    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,931
Number of Sequences: 2123
Number of extensions: 5632
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 3
length of query: 160
length of database: 516,269
effective HSP length: 59
effective length of query: 101
effective length of database: 391,012
effective search space: 39492212
effective search space used: 39492212
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 45 (22.2 bits)