GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000460-TA|BGIBMGA000460-PA|undefined
         (160 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069262-1|AAH69262.1|  900|Homo sapiens INT1 protein protein.         30   3.2  
BC018777-1|AAH18777.1|  698|Homo sapiens INT1 protein protein.         30   3.2  
BC013367-1|AAH13367.2|  809|Homo sapiens INT1 protein protein.         30   3.2  
AY358482-1|AAQ88846.1| 1029|Homo sapiens HILV1821 protein.             30   3.2  
AB037861-1|BAA92678.1| 1377|Homo sapiens KIAA1440 protein protein.     30   3.2  
Z85987-1|CAI42222.1|  961|Homo sapiens FYVE, RhoGEF and PH domai...    30   4.2  
U11690-1|AAA57004.1|  961|Homo sapiens FGD1 protein.                   30   4.2  
BC034530-1|AAH34530.1|  961|Homo sapiens FYVE, RhoGEF and PH dom...    30   4.2  

>BC069262-1|AAH69262.1|  900|Homo sapiens INT1 protein protein.
          Length = 900

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 19/59 (32%), Positives = 29/59 (49%)

Query: 58  LLESAEAEPRDELTDWELPESSDESTDLPSLGLLSTASAEPLSDSDLAFLRGRGVSGQS 116
           LL       RD+ TD  L E  +E +   SL L+S +   PL+ +++A    R   GQ+
Sbjct: 711 LLAGLSLPSRDDRTDRGLDEEGEEESSAGSLPLVSVSLFTPLTAAEMAPYMKRLSRGQT 769


>BC018777-1|AAH18777.1|  698|Homo sapiens INT1 protein protein.
          Length = 698

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 19/59 (32%), Positives = 29/59 (49%)

Query: 58  LLESAEAEPRDELTDWELPESSDESTDLPSLGLLSTASAEPLSDSDLAFLRGRGVSGQS 116
           LL       RD+ TD  L E  +E +   SL L+S +   PL+ +++A    R   GQ+
Sbjct: 509 LLAGLSLPSRDDRTDRGLDEEGEEESSAGSLPLVSVSLFTPLTAAEMAPYMKRLSRGQT 567


>BC013367-1|AAH13367.2|  809|Homo sapiens INT1 protein protein.
          Length = 809

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 19/59 (32%), Positives = 29/59 (49%)

Query: 58  LLESAEAEPRDELTDWELPESSDESTDLPSLGLLSTASAEPLSDSDLAFLRGRGVSGQS 116
           LL       RD+ TD  L E  +E +   SL L+S +   PL+ +++A    R   GQ+
Sbjct: 620 LLAGLSLPSRDDRTDRGLDEEGEEESSAGSLPLVSVSLFTPLTAAEMAPYMKRLSRGQT 678


>AY358482-1|AAQ88846.1| 1029|Homo sapiens HILV1821 protein.
          Length = 1029

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 19/59 (32%), Positives = 29/59 (49%)

Query: 58  LLESAEAEPRDELTDWELPESSDESTDLPSLGLLSTASAEPLSDSDLAFLRGRGVSGQS 116
           LL       RD+ TD  L E  +E +   SL L+S +   PL+ +++A    R   GQ+
Sbjct: 840 LLAGLSLPSRDDRTDRGLDEEGEEESSAGSLPLVSVSLFTPLTAAEMAPYMKRLSRGQT 898


>AB037861-1|BAA92678.1| 1377|Homo sapiens KIAA1440 protein protein.
          Length = 1377

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 19/59 (32%), Positives = 29/59 (49%)

Query: 58   LLESAEAEPRDELTDWELPESSDESTDLPSLGLLSTASAEPLSDSDLAFLRGRGVSGQS 116
            LL       RD+ TD  L E  +E +   SL L+S +   PL+ +++A    R   GQ+
Sbjct: 1188 LLAGLSLPSRDDRTDRGLDEEGEEESSAGSLPLVSVSLFTPLTAAEMAPYMKRLSRGQT 1246


>Z85987-1|CAI42222.1|  961|Homo sapiens FYVE, RhoGEF and PH domain
           containing 1 (faciogenital dysplasia) protein.
          Length = 961

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 117 AGRGNIVCPGPTLGESWPPQGVP 139
           AGRG+  CPGPTL E    +  P
Sbjct: 919 AGRGDTFCPGPTLSEDREMEEAP 941


>U11690-1|AAA57004.1|  961|Homo sapiens FGD1 protein.
          Length = 961

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 117 AGRGNIVCPGPTLGESWPPQGVP 139
           AGRG+  CPGPTL E    +  P
Sbjct: 919 AGRGDTFCPGPTLSEDREMEEAP 941


>BC034530-1|AAH34530.1|  961|Homo sapiens FYVE, RhoGEF and PH domain
           containing 1 (faciogenital dysplasia) protein.
          Length = 961

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 117 AGRGNIVCPGPTLGESWPPQGVP 139
           AGRG+  CPGPTL E    +  P
Sbjct: 919 AGRGDTFCPGPTLSEDREMEEAP 941


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.139    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,952,184
Number of Sequences: 224733
Number of extensions: 893088
Number of successful extensions: 5123
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5115
Number of HSP's gapped (non-prelim): 8
length of query: 160
length of database: 73,234,838
effective HSP length: 84
effective length of query: 76
effective length of database: 54,357,266
effective search space: 4131152216
effective search space used: 4131152216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)