Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000459-TA|BGIBMGA000459-PA|IPR013129|Transcription
factor jumonji, IPR003347|Transcription factor jumonji/aspartyl
beta-hydroxylase
(402 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16678| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 1e-21
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 3e-19
SB_39434| Best HMM Match : JmjC (HMM E-Value=0.12) 85 7e-17
SB_42143| Best HMM Match : JmjC (HMM E-Value=0.015) 81 2e-15
SB_40922| Best HMM Match : JmjC (HMM E-Value=0.092) 66 6e-11
SB_5128| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 62 8e-10
SB_53419| Best HMM Match : TPR_2 (HMM E-Value=4.2e-06) 62 8e-10
SB_33886| Best HMM Match : JmjC (HMM E-Value=0.016) 60 4e-09
SB_15289| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 3e-07
SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 4e-07
SB_25366| Best HMM Match : Tctex-1 (HMM E-Value=2.6e-08) 52 8e-07
SB_22153| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 1e-06
SB_20865| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_49389| Best HMM Match : JmjC (HMM E-Value=0.095) 46 4e-05
SB_41461| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_49244| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_52703| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_21330| Best HMM Match : JmjC (HMM E-Value=0.0054) 38 0.011
SB_30810| Best HMM Match : JmjC (HMM E-Value=0.0021) 35 0.10
SB_32225| Best HMM Match : JmjC (HMM E-Value=1.3e-09) 32 0.95
SB_13968| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_45838| Best HMM Match : Sigma70_r1_1 (HMM E-Value=2.6) 30 3.8
SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.8
SB_53596| Best HMM Match : F5_F8_type_C (HMM E-Value=1.3e-21) 29 5.1
SB_28851| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
>SB_16678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 101 bits (241), Expect = 1e-21
Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Query: 296 WYGPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYLYPHD-HELLSNTAKVDPREP 354
W G G ++PLH+D LL Q+ G+K+I LF D+ +LYP + S+ +KV+ R+
Sbjct: 178 WVGTAGNITPLHYDRNHGLLMQIRGQKKIILFSTEDTNFLYPFPGYSEKSHISKVNLRDV 237
Query: 355 NYEIYPEYRHAKAYYCKLNPGQMLFIPPKWWHFVESLSISFSVSFWWD 402
N ++P++ + Y C +N G ML+IPP WWH V SL SV+ WD
Sbjct: 238 NVNVFPKFVETQPYCCLINKGDMLYIPPFWWHDVTSLDNCVSVTLSWD 285
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 93.5 bits (222), Expect = 3e-19
Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 9/228 (3%)
Query: 176 PSMESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVELGSKYTDSDW 235
PS FY + +PVV+ N+WPA KW ++ Y + +G V+ K+
Sbjct: 34 PSGSDFYHRYVHGRQPVVIRGAANHWPAKEKWKNETYLRQKSGTEAFTVDTRKKFDGKVS 93
Query: 236 TQKLMTVEEFIKDHIYQSNGPKGYLAQYQLFDQIPELKADIIEPEYCCFAETENPIDVMA 295
+K +T+ EF+ IY++ YL F +L D+ P E + I M
Sbjct: 94 VRKPLTISEFLD--IYKTEPV--YLDSP--FPP-SKLLHDLYLPPILNCEELSSTISQMT 146
Query: 296 WYGPKG-TVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYLYPHDHELLSNTAKVDPREP 354
G T S HHD N++ + G K L S +Y D +L DP +
Sbjct: 147 LLFSNGNTTSAFHHDGYDNVIVLLSGTKHFILIDSKYSDDVYADDAKLFPGVLPFDPEKI 206
Query: 355 NYEIYPEYRHAKAYYCKLNPGQMLFIPPKWWHFVESL-SISFSVSFWW 401
+++ +P+ Y L G M++IP WWH V S S + +V+ W+
Sbjct: 207 DFKAFPKLAKVPFYEITLYEGDMIYIPQYWWHIVRSYGSPNIAVNSWF 254
>SB_39434| Best HMM Match : JmjC (HMM E-Value=0.12)
Length = 672
Score = 85.4 bits (202), Expect = 7e-17
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 28/191 (14%)
Query: 238 KLMTVEEFIKDHIYQSNGPKGYLAQYQLFDQIPELKADIIEPEYCCFAETENPIDVMAWY 297
K M + E ++ + + YL + PELK DI E C A N + W
Sbjct: 404 KFMDLLEGRNSNLTKMSNISAYLEYTSIPSYFPELKQDI--QEMPCAAGLLNRKHLNIWL 461
Query: 298 GPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYLYP-----------HDHE----- 341
T+ LH DP +N L Q+ G+KQ+ L+ P D+ LY H H+
Sbjct: 462 SDGNTLGKLHFDPFENFLCQISGKKQVILYEPHDNTRLYEAHIQESMLEYNHAHKEFRRK 521
Query: 342 -LLSNTAKV----DPREPNYEIYPEYRHAKAYYCKLNPGQMLFIPPKWWHFVESLSI--- 393
LL +T+ V D +P+YE +P+++ +A C +N G++LF+P WWH V+S
Sbjct: 522 KLLDSTSMVMSPVDILKPDYERFPKFQGVRAMNCTINEGEVLFMPSFWWHEVQSYPSHIN 581
Query: 394 --SFSVSFWWD 402
+ +V+FW++
Sbjct: 582 PRNLAVNFWYE 592
Score = 40.3 bits (90), Expect = 0.003
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 176 PSMESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRT-VAVELGSKYTDSD 234
PS E F + + KPV++ + + +WPA+ KW ++ K + T VA +Y +
Sbjct: 305 PSQEEFLNKYLFRSKPVIITDAIKHWPAIQKWTNEFLRAKYSNTDTRVAFAPSGEY---E 361
Query: 235 WTQKLMTVEEF 245
+K EEF
Sbjct: 362 GCEKAENYEEF 372
>SB_42143| Best HMM Match : JmjC (HMM E-Value=0.015)
Length = 352
Score = 80.6 bits (190), Expect = 2e-15
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 16/248 (6%)
Query: 163 NKCNTVPVDVMDCP--SMESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLR 220
NK VP+++ S+E F N + +P+++ N +WP + W ++ + G
Sbjct: 8 NKMAVVPLEISRVQDISVEDFRKNHLQAGEPLIIENFAKSWPCMN-WTFES-LKETVGAN 65
Query: 221 TVAVELGSKYTDSDWTQKLMTVEEFIKDHIYQ-SNGPK----GYLAQYQLFDQIPELKAD 275
V V + D +K + ++ ++G K YLA + PEL+ +
Sbjct: 66 MVHVRRNTNCEDYKVGKKYNIDQIPFSGYVQDLTSGNKRSMNSYLAVQNIKQAFPELQNE 125
Query: 276 IIEPEYCCFAETENPIDVMAWYGPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYL 335
+ P + P W + H DP N L V G K++ LF S L
Sbjct: 126 VPIPPFVGKLHA-GPF---LWMARENHYEFCHFDPDDNFLIMVHGRKRVRLFGGRLSP-L 180
Query: 336 YPHDHELLSNT--AKVDPREPNYEIYPEYRHAKAYYCKLNPGQMLFIPPKWWHFVESLSI 393
YP++ T ++V+ +P+ + +PE+ +A Y C L G+MLF P WWH V SL +
Sbjct: 181 YPNELGSKGRTIQSQVNCDKPDLDKFPEFVNAVMYECILTHGEMLFFPAFWWHQVTSLEM 240
Query: 394 SFSVSFWW 401
S S++ ++
Sbjct: 241 SISINMFF 248
>SB_40922| Best HMM Match : JmjC (HMM E-Value=0.092)
Length = 403
Score = 65.7 bits (153), Expect = 6e-11
Identities = 56/228 (24%), Positives = 91/228 (39%), Gaps = 14/228 (6%)
Query: 176 PSMESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVELGSKYTDSDW 235
PS F+ N ++ KP++ PA W D+ K LR + VE G K S W
Sbjct: 47 PSPHEFFNNYVIPGKPLLFKGAAKALPAYKLWTDEYLSSKFGDLR-MEVEEGKKENRS-W 104
Query: 236 TQKLMTVEEFIKDHIYQSNGPKGYLAQYQLFDQIPELKADIIEPEYCCFAETENPIDVMA 295
++EFI + + Y+ + Q P + ++ C T D +
Sbjct: 105 GTFNFKLKEFINKYKKEDI----YMVESL---QKPMREDYMLLHSLACGGFTNVLQDAVM 157
Query: 296 WYGPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYL-YPHDHELLSNTAKVDPREP 354
W+ GT S LH+D +N+ G K + D KY+ H + + VD
Sbjct: 158 WFSSGGTKSVLHYDSLENINCLFSGNKNFVMI---DKKYMNMTHIDRKDGSFSNVDVERV 214
Query: 355 NYEIYPEYRHAKAYYCKLNPGQMLFIPPKWWHFVESLS-ISFSVSFWW 401
+ + YP + G ++IP +W H V+S + +V+ WW
Sbjct: 215 DMQKYPGLGKVPWMNASMEEGDCMYIPWRWVHQVQSFGPRNLAVNIWW 262
>SB_5128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2102
Score = 64.5 bits (150), Expect = 1e-10
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 176 PSMESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVELGSKYTDSDW 235
P+ + FY + + + KPVVL + NWPA+ W++++Y + G V+ KY
Sbjct: 923 PNGKDFYEHFVRQRKPVVLRGAIKNWPAVKHWSNESYLAEKYGDIIFDVQFTKKYETILP 982
Query: 236 TQKLMTVEEFIKDHIYQSNGPKGYLAQYQLFDQIPELKADIIEPEYCCFAETENPI-DVM 294
+K M ++E++K IY+ YL F P + DI+ P E + I
Sbjct: 983 IKKTMNLKEYLK--IYKKENV--YLD--CPFPHSP-MTQDILVPYNLQCPELLSGIASTH 1035
Query: 295 AWYGPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYLYPHDHELLSNTAKVDPREP 354
+ T S +H+D +NLLS V G K++ + S + Y ++ ++ A +DP
Sbjct: 1036 LLFSSGNTSSSIHYDGYENLLSLVSGTKEVLVANYSYTDRFYHRNYTTVNIEAPIDPEAV 1095
Query: 355 NYEIYPE 361
+ +P+
Sbjct: 1096 DLLRFPK 1102
Score = 57.2 bits (132), Expect = 2e-08
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 179 ESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVELGSKYTDSD-WTQ 237
+ FY++ I + +PV++ N N+WPA W D+ Y G VE ++ +D +
Sbjct: 1134 KDFYSHFIRQRRPVIMRNAANDWPAFKLWKDEEYLASKYGHEVFDVEYRKVHSPTDPPAK 1193
Query: 238 KLMTVEEFIKDHIYQSNGPKGYLAQYQLFDQIPELKADIIEPEYC--CFAETENPIDVMA 295
+ M + EF++ IY++ + F Q ++ D+ P +C C + I
Sbjct: 1194 RTMNMSEFLR--IYETQD----VYMDSPFPQ-SQMTEDLKLP-FCLQCEEQASQIISTHL 1245
Query: 296 WYGPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYLYPHDHELLSNTAKVDPREP 354
+ T S H+D +NLL+ + G+K + L S S+ H + T K+ P P
Sbjct: 1246 LFSSGNTSSSCHYDGYENLLTVLSGQKVVLLANYSQSELF--HLDLKKTVTEKIIPHAP 1302
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 62.1 bits (144), Expect = 8e-10
Identities = 61/275 (22%), Positives = 114/275 (41%), Gaps = 13/275 (4%)
Query: 121 IENELQLLQKCAGLLNPYSSDYVSEISTNTIKLKHNEVNVEPNKCNTVPVDVMDC-PSME 179
I + L + A + + + +V+ ++ +++ + + + ++ + V+V+ PS +
Sbjct: 374 ITTQRPLTMRTALVFSSVTLLFVACVADKIFEIRGHGLELGKHRDSDGHVEVLQSLPSPK 433
Query: 180 SFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVELGSKYTDSDWTQKL 239
F+ N KPVVL N+PA W D Y ++ G V +E + +K
Sbjct: 434 EFWDNYASIRKPVVLRGAGKNFPAFDLWTDP-YLVENYGDLEVKLEARKEKEKVPVGEKG 492
Query: 240 M---TVEEFIKDHIYQSNGPKGYLAQYQLFDQIPELKADIIEPEYCCFAETENPIDVMAW 296
+ T+ F++ + + Y+ QL D P + + P C +E ++ W
Sbjct: 493 LGRDTIRSFLESYAKKDT----YMVS-QLPD--PLAREVRVLPCLMCGTFSERILEANLW 545
Query: 297 YGPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYL-YPHDHELLSNTAKVDPREPN 355
GT S LH D + + G K L P + K + + A +D + N
Sbjct: 546 LSSGGTKSMLHKDADNAINCLLNGTKDWILIHPDNEKNIPVAKGDKGYGGFATLDVDKVN 605
Query: 356 YEIYPEYRHAKAYYCKLNPGQMLFIPPKWWHFVES 390
YP+++ Y L G L++P +WH V S
Sbjct: 606 LIKYPKFKEVHWQYANLTAGDCLYLPYSYWHQVRS 640
>SB_53419| Best HMM Match : TPR_2 (HMM E-Value=4.2e-06)
Length = 378
Score = 62.1 bits (144), Expect = 8e-10
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 240 MTVEEFIKDHIYQSNGPKGYLAQYQLFDQIPELKADIIEPEYCCFAETENPIDVM----A 295
M + +FI ++ N P YL + L P L ++ P Y + +D
Sbjct: 128 MKLADFIDSNMRSGNEPL-YLFDWSLPTHAPHLAKELTIPRYFSGDFLQRTVDGSLYKDT 186
Query: 296 W----YGPKGTVSPLHHDP--KKNLLSQVVGEKQIYLFPPSDSKYLYPH-DHELLSNTAK 348
W P G VS LH D ++ G K+ F SD LYPH D + L+ +
Sbjct: 187 WPSLFIAPAGLVSDLHVDGFGSNFWMALFQGRKKWTFFNKSDLPLLYPHCDDQSLNISFD 246
Query: 349 VDPREPNYEIYPEYRHAKAYYCKLNPGQMLFIPPKWWHFVESLSISFSVS 398
V+ P+ + +P C L PG++LF+P HFVE+L S +VS
Sbjct: 247 VNLANPDMKYFPLLAQTTPRQCILEPGELLFVPHGSPHFVENLEDSLAVS 296
>SB_33886| Best HMM Match : JmjC (HMM E-Value=0.016)
Length = 224
Score = 59.7 bits (138), Expect = 4e-09
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 313 NLLSQVVGEKQIYLFPPSDSKYLYPHDHELLSNTAKVDPREPNYEIYPEYRHAKAYYCKL 372
NLL QV G K+ LF P D+K LY + + S+ +D +P YP++ A + L
Sbjct: 75 NLLIQVKGCKRAVLFSPKDAKNLYLNGDK--SDVLDIDCPDPAK--YPKFYSAVQHEALL 130
Query: 373 NPGQMLFIPPKWWHFVESLSISFSVSFWW 401
PG +LFIP W+H V SL +V+ +W
Sbjct: 131 EPGDVLFIPALWFHNVVSLDFGVAVNVFW 159
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 164 KCNTVPVDVMDCPSMESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVA 223
K VPV + S E F ++ K +P VL ++ A+TKW + Y ++ G + V
Sbjct: 12 KIQRVPVKIFHGLSREEFLSDVYSKREPAVL-RGLDIGAAVTKWTPK-YLAEVGGEKLVK 69
Query: 224 VEL 226
V +
Sbjct: 70 VHI 72
>SB_15289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 53.6 bits (123), Expect = 3e-07
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 13/177 (7%)
Query: 174 DCPSMESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVELGSKYTDS 233
D PS FY N +L KPV+ + W D Y K G V V+ G K +
Sbjct: 47 DMPSPSEFYHNYVLASKPVIFRGAAKSSKGFNLWTDA-YLRKKYGHEIVRVDYGKKENRA 105
Query: 234 DWTQKLMTVEEFIKDHIYQSNGPKGYLAQYQLFDQIPE-LKADIIEPE-YCCFAETENPI 291
M +EEF+ IY S ++ L D +PE + + PE C T
Sbjct: 106 RSADD-MPLEEFL--DIYNS-------SERYLVDTLPERMWEEFSLPECLLCGGFTHALQ 155
Query: 292 DVMAWYGPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYLYPHDHELLSNTAK 348
D + W+ GT S LH+D +N+ GEK + + + + LSN K
Sbjct: 156 DSVLWFSSGGTKSHLHNDKVENINCLFSGEKVWFFVDQIQRLFGFKGNTVPLSNMCK 212
>SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 53.2 bits (122), Expect = 4e-07
Identities = 58/223 (26%), Positives = 88/223 (39%), Gaps = 14/223 (6%)
Query: 179 ESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVELGSKYTDSDWTQK 238
E F+ + K +P V + A+ KW DQ Y + G V +EL K + K
Sbjct: 72 EEFWNQHVSKNRPAVFRKAIAKSAAIEKWTDQ-YLKEKYGDLDVLIEL--KRENRSQGAK 128
Query: 239 LMTVEEFIKDHIYQSNGPKGYLAQYQLFD-QIPELKADIIEPEYCCFAETENPIDVMAWY 297
MT+E FI ++ + L + Q+P ++ + F N W
Sbjct: 129 RMTLEAFIDNYTERDVYVVTVLPDPMRKEVQVPSC---LLGGSFVDFIHETN-----FWM 180
Query: 298 GPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYLYPHDHELLSNTA--KVDPREPN 355
GT S +H+D L V G K L L + + S + +VDP + +
Sbjct: 181 SSGGTRSLVHYDADHILHCLVAGRKDWMLINQQFVGDLNMVEKDQFSGSGYTQVDPDKVD 240
Query: 356 YEIYPEYRHAKAYYCKLNPGQMLFIPPKWWHFVESLSISFSVS 398
YP + Y L PG LF+P ++ H V S S SV+
Sbjct: 241 LLAYPNITNVHWNYTTLLPGDCLFLPAEYIHQVRSHIRSISVT 283
>SB_25366| Best HMM Match : Tctex-1 (HMM E-Value=2.6e-08)
Length = 556
Score = 52.0 bits (119), Expect = 8e-07
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Query: 176 PSMESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVEL-GSKYTDSD 234
P+ FY + +PV++ N +N+WPAL WN Q Y K G +T V + + Y D+
Sbjct: 34 PTPLKFYREWVAPNRPVIIRNAINHWPALKLWNSQ-YLKKCIGEKTTTVAVTPNGYADAI 92
Query: 235 WTQK-LMTVEEFIKDHIYQSNGPKGYLAQYQLFDQIPELKADIIEPEYCCFAETENPIDV 293
+ +M E +K + K A P ++ + +T+ + V
Sbjct: 93 VGDRFVMPEERLMKFGHFLDILEKRVEANAVRPPPPPSPSPSVVPKNNSAYLQTQ--LTV 150
Query: 294 MAWYGPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYL 335
A + +H DP +NL + G K+ L PP+D ++
Sbjct: 151 RA-------IPSMHKDPYENLYCVISGYKKFTLIPPTDLPFI 185
>SB_22153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 51.6 bits (118), Expect = 1e-06
Identities = 45/151 (29%), Positives = 63/151 (41%), Gaps = 13/151 (8%)
Query: 174 DCPSMESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVELGSKYTDS 233
D PS FY N +L KPV+ + W D Y K G V V+ G K +
Sbjct: 47 DMPSPSEFYHNYVLASKPVIFRGAAKSSKGFNLWTDA-YLRKKYGHEIVRVDYGKKENRA 105
Query: 234 DWTQKLMTVEEFIKDHIYQSNGPKGYLAQYQLFDQIPE-LKADIIEPE-YCCFAETENPI 291
M +EEF+ IY S ++ L D +PE + + PE C +
Sbjct: 106 RSADD-MPLEEFL--DIYNS-------SERYLVDTLPERMWEEFSLPECLLCGGFSHALQ 155
Query: 292 DVMAWYGPKGTVSPLHHDPKKNLLSQVVGEK 322
D + W+ GT S LH+D +N+ GEK
Sbjct: 156 DSVLWFSSGGTKSHLHNDKVENINCLFSGEK 186
>SB_20865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 50.4 bits (115), Expect = 3e-06
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 296 WYGPKGTVSPLHHDPKKNLL-SQVVGEKQIYLFPPSDSKYLYPH--DHELLSNTAKVDPR 352
W G +G +P H D ++L +Q+ G K+ LF P D+ LYP +E S +KV+
Sbjct: 45 WVGSEGAFTPCHMDTYGSILVAQIFGRKKWTLFDPMDTDNLYPTRIPYEESSVFSKVNIT 104
Query: 353 EPNYEIYPEYRHAKAYYCKLNP 374
P+Y+ +P +R A Y P
Sbjct: 105 SPDYQAFPLFRKATPYEASRAP 126
>SB_49389| Best HMM Match : JmjC (HMM E-Value=0.095)
Length = 486
Score = 46.4 bits (105), Expect = 4e-05
Identities = 52/242 (21%), Positives = 93/242 (38%), Gaps = 35/242 (14%)
Query: 179 ESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVELGSKYTDSDWTQK 238
+ F+ + + P+V + + PA+ W D+ Y + G V +E + TQ+
Sbjct: 76 QEFWEKHVHENLPLVFRHGVAESPAIANWKDE-YLKEKYGDLDVLIEGKRENRTHGKTQR 134
Query: 239 LMT---VEEFIKDHIYQSNG-PKGYLAQYQLFDQIPELKADIIEPEYCCFAETENPIDVM 294
++ ++ + KD +Y P LA+ Q + P C + +
Sbjct: 135 MLLGDFIDRYRKDDLYVVTVMPDPMLAEVQ------------VPPAIMCGTFAKFLHETN 182
Query: 295 AWYGPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYLY-------PHDHELL---- 343
W G GT S +H+D N+ + G K + + L P + L+
Sbjct: 183 LWIGSGGTRSVIHYDADHNIHCMMAGRKDFIMIHQKFKQQLKLGKRSPTPMFYNLVTKGF 242
Query: 344 -------SNTAKVDPREPNYEIYPEYRHAKAYYCKLNPGQMLFIPPKWWHFVESLSISFS 396
S + V+P E N ++YP + Y +N G +F+P + H V S S S
Sbjct: 243 FQFPQFGSGFSMVNPDEINLDLYPNISDVEWTYATINDGDCIFLPSGYIHQVRSYGRSIS 302
Query: 397 VS 398
+
Sbjct: 303 AT 304
>SB_41461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 44.8 bits (101), Expect = 1e-04
Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Query: 239 LMTVEEFIKDHIYQSNGPKGYLAQYQLFDQIPELKADIIEPEYCCFAETENPIDV-MAWY 297
+++ E+F ++ + P + + F PE++ DII E N V +
Sbjct: 92 MISSEDFYMKYVIKHK-PVIFKSLIPRFQVHPEMQKDIILSLALRCEEISNYFFVSFLFM 150
Query: 298 GPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYLYPHDHELLSNTAKVDPREPNYE 357
GT S +H D +NLLS + G K+ L P S LY D +LL + +DP +
Sbjct: 151 SNGGTSSKIHLDTDENLLSVIRGHKETILVHPRYSADLYTDDADLL-GVSDIDPLAVDMI 209
Query: 358 IYPEYRHAKAYYCKLNPG 375
YP ++ + ++ G
Sbjct: 210 KYPRVKNVRYLLASMDSG 227
>SB_49244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 43.2 bits (97), Expect = 4e-04
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 13/234 (5%)
Query: 176 PSMESFYTNRILKEKPVVLINCMNNWPALTKWN-DQNYFLKMAGLRTVAVELGSKYTDSD 234
PS E F N I P ++ +++WPA+T W+ D+ G++ ++ S Y
Sbjct: 72 PSREEFLENFINPGIPAIITQAIDDWPAMTMWDFDKLEGHLTKGVKVNILDHPSPY--KR 129
Query: 235 WTQKLMTVEEFIKDHIYQSNGPKGYLAQYQLFDQIPELKADIIEPEYCCFAETE-NPIDV 293
W + ++D Q + + QL + ++ +Y F + + P +
Sbjct: 130 WNSLRQNLAASLRDP-PQVHMTDFHTVYPQLMADVRQMDIFPDNADYMQFVDEDIKPAQL 188
Query: 294 MAWYGPKGTVSPLHHDPKKNLL--SQVVGEKQIYLFPPSDSKYLYP---HDHELLSNTAK 348
P+ + + L + V G K+ L+PP S Y P H++ ++
Sbjct: 189 SLQMAPQRSGYHWRVEQYNGSLWSALVRGHKRWGLYPP--SVYFPPGVVHNNHRAQDSQS 246
Query: 349 VDPREPNYEIYPEYR-HAKAYYCKLNPGQMLFIPPKWWHFVESLSISFSVSFWW 401
+P P R + C PG++L+IP WW +L + ++ W+
Sbjct: 247 SEPFTWWAHTQPRLRADRRPSECVQKPGEILYIPSGWWWSHINLEDTITLQRWF 300
>SB_52703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 176 PSMESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYF--LKMAGLRTVAVELGSKYTDS 233
PS + F+TN ++ KPV+ +PA +WND NYF + + +A+E K S
Sbjct: 12 PSPQEFFTNFVIPAKPVLFSGGAKRYPAFERWND-NYFKSFRESNEFKIAIEHEKKENRS 70
Query: 234 DWTQKL---MTVEEFIKDHIYQSNGPKGYL 260
+ + V+ + +D+IY N +L
Sbjct: 71 LPGEDIPFSSFVDRYTQDNIYMVNSVPDFL 100
>SB_21330| Best HMM Match : JmjC (HMM E-Value=0.0054)
Length = 304
Score = 38.3 bits (85), Expect = 0.011
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
Query: 283 CFAETENPIDVMAWYGPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYLYPHDHEL 342
C + ++ +V + G + +H DP + G K +L + + +Y +
Sbjct: 2 CGSFLDSVQEVHLFMSAGGGKTMIHRDPYSTIHCVFNGTKDWWLLGQNQTHLVYESEESS 61
Query: 343 --LSNTAKVDPREPNYEIYPEYRHAKAYYCKLNPGQMLFIPPKWWHFVESLS-ISFSVSF 399
L + VD + E +P K +N G +F+P WH V S ++ +VS
Sbjct: 62 KELGGFSIVDVNAVDLEKFPSISDVKYSRITMNKGDCIFVPGGIWHHVRSNGYMNTAVSI 121
Query: 400 WW 401
W+
Sbjct: 122 WF 123
>SB_30810| Best HMM Match : JmjC (HMM E-Value=0.0021)
Length = 546
Score = 35.1 bits (77), Expect = 0.10
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Query: 291 IDVMAWYGPKGTVSPLHHDPKKNLLSQVVGEK--QIYLFPPSDSKYLYPHDHELLSNTAK 348
++V W GT S +H D + + G K ++ + D Y E++ +K
Sbjct: 384 VEVDLWLSGGGTASIMHKDAFNAINCLMNGTKVWKMIEYKYEDKIYKAWEPPEMIGGFSK 443
Query: 349 VDPREPNYEIYPEYRHAKAYYCKLNPGQMLFIPPKWWHFVES 390
++ + + YP+ +N G LF+P ++H V S
Sbjct: 444 INVQNVDLLKYPKVAEVPWSLVTINAGDCLFLPKSYYHQVTS 485
>SB_32225| Best HMM Match : JmjC (HMM E-Value=1.3e-09)
Length = 183
Score = 31.9 bits (69), Expect = 0.95
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 374 PGQMLFIPPKWWHFVESLSISFSVS 398
PG+ +F+P WWH V +L + +V+
Sbjct: 70 PGETVFVPGGWWHVVVNLDAAIAVT 94
>SB_13968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 31.1 bits (67), Expect = 1.7
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 193 VLINCMNNWPALTKWNDQNYFLKMAGLRTVAVELGSKYTDSDWTQKLMTVEEFIKDHIYQ 252
+L+NC ++K ++ + AG AV L +K+ DW K+ +E+ H YQ
Sbjct: 287 LLLNCYTKLKDVSKLDEFIMVCRQAGYFKHAVNLANKFEQHDWYLKIQ-LEDL---HDYQ 342
Query: 253 SNGPKGYLAQYQLFDQIPELKA 274
Y+AQ ++ +KA
Sbjct: 343 K--ALEYIAQLDFYEAESNMKA 362
>SB_45838| Best HMM Match : Sigma70_r1_1 (HMM E-Value=2.6)
Length = 166
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 359 YPEYRHAKAYYCKLNPGQMLFIPPKWWHFVESLSISFSVSFWW 401
+P + + ++ + G L++P W H V S + +V+ WW
Sbjct: 7 FPGLYNLEHWHVVVKEGDCLYLPFLWVHQVTSYDSNVAVNVWW 49
>SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2214
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 299 PKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYLYPHDHELLSNTAKVDPREP 354
P GT +P P+ + Q G +QI PPS + P ++ L + DP +P
Sbjct: 1514 PDGTPAPGVGPPEDGGMGQRSGSQQISPSPPSPAGKRDPSKYQKLEGETEPDPPKP 1569
>SB_53596| Best HMM Match : F5_F8_type_C (HMM E-Value=1.3e-21)
Length = 472
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 165 CNTVPVDVMDCPSMESFYTNRILKEKPVVLINCMNNWPALTKWNDQN 211
CNT+ + C + T++ + P+ I N WP +KW++++
Sbjct: 227 CNTLKRNTRTCNRRNT--THKAKNQLPIPKIIFFNQWPFFSKWSNES 271
>SB_28851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 343 LSNTAKVDPREPNYEIYPEYRHAKAYYCKLNPGQMLFIP 381
+S+ K+ + PN EI E YYCKL + +P
Sbjct: 5 ISHVKKILAKHPNLEIVEENSERPKYYCKLTKRYLNNLP 43
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.137 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,339,520
Number of Sequences: 59808
Number of extensions: 626994
Number of successful extensions: 1470
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1423
Number of HSP's gapped (non-prelim): 35
length of query: 402
length of database: 16,821,457
effective HSP length: 84
effective length of query: 318
effective length of database: 11,797,585
effective search space: 3751632030
effective search space used: 3751632030
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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