Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000459-TA|BGIBMGA000459-PA|IPR013129|Transcription
factor jumonji, IPR003347|Transcription factor jumonji/aspartyl
beta-hydroxylase
(402 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g20810.1 68416.m02631 transcription factor jumonji (jmjC) dom... 215 3e-56
At3g20810.2 68416.m02632 transcription factor jumonji (jmjC) dom... 214 1e-55
At5g19840.1 68418.m02357 transcription factor jumonji (jmjC) dom... 82 6e-16
At5g06550.1 68418.m00739 transcription factor jumonji (jmjC) dom... 62 8e-10
At3g45880.1 68416.m04965 hypothetical protein 58 8e-09
At5g63080.1 68418.m07917 transcription factor jumonji (jmjC) dom... 48 8e-06
At1g78280.1 68414.m09122 transcription factor jumonji (jmjC) dom... 36 0.036
At3g11760.1 68416.m01443 expressed protein 31 1.8
At5g37780.1 68418.m04549 calmodulin-1/4 (CAM1) identical to calm... 29 4.2
At3g56800.1 68416.m06317 calmodulin-2/3/5 (CAM3) identical to ca... 29 4.2
At3g53790.1 68416.m05943 telomere-binding protein, putative simi... 29 4.2
At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquino... 29 4.2
At2g41110.1 68415.m05078 calmodulin-2/3/5 (CAM2) (CAL1) almost i... 29 4.2
At2g27030.3 68415.m03247 calmodulin-2/3/5 (CAM5) (TCH1) identica... 29 4.2
At2g27030.2 68415.m03246 calmodulin-2/3/5 (CAM5) (TCH1) identica... 29 4.2
At2g27030.1 68415.m03245 calmodulin-2/3/5 (CAM5) (TCH1) identica... 29 4.2
At1g66410.1 68414.m07542 calmodulin-1/4 (CAM4) identical to calm... 29 4.2
At5g59430.2 68418.m07448 telomere repeat-binding protein 1 (TRP1... 29 5.5
At5g59430.1 68418.m07447 telomere repeat-binding protein 1 (TRP1... 29 5.5
At5g23130.1 68418.m02705 peptidoglycan-binding LysM domain-conta... 29 7.3
At5g13820.1 68418.m01615 telomeric DNA-binding protein 1 (TBP1) ... 29 7.3
At5g49140.1 68418.m06082 disease resistance protein (TIR-NBS-LRR... 28 9.6
At4g34390.1 68417.m04885 extra-large guanine nucleotide binding ... 28 9.6
At3g43810.1 68416.m04682 calmodulin-7 (CAM7) almost identical to... 28 9.6
At3g13460.2 68416.m01694 expressed protein contains Pfam profile... 28 9.6
At3g13460.1 68416.m01693 expressed protein contains Pfam profile... 28 9.6
At2g28580.1 68415.m03472 hypothetical protein contains Pfam prof... 28 9.6
>At3g20810.1 68416.m02631 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain PF02373:
jmjC domain
Length = 418
Score = 215 bits (526), Expect = 3e-56
Identities = 115/277 (41%), Positives = 159/277 (57%), Gaps = 5/277 (1%)
Query: 129 QKCAGLLNPYSSDYVSEISTNTIKLKHNEV-NVEPNKCNTVP-VDVMDCPSMESFYTNRI 186
+K L S D+ E + + NEV + P + T V+ S+E F +
Sbjct: 134 RKMTKSLEEASGDFKGERLVPEVPVDVNEVLKILPCRSLTCKRVEKRSGLSLEGFLRDYY 193
Query: 187 LKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVELGSKYTDSDWTQKLMTVEEFI 246
L PVV+ N M +WPA TKWN +Y +AG RTV VE+G Y SDW Q+L+T +F+
Sbjct: 194 LPGTPVVITNSMAHWPARTKWNHLDYLNAVAGNRTVPVEVGKNYLCSDWKQELVTFSKFL 253
Query: 247 KDHIYQSNGPKG--YLAQYQLFDQIPELKADIIEPEYCCFAETENPIDVMAWYGPKGTVS 304
+ + P YLAQ+ LFDQI EL+ DI P+YC E + AW+GP GTV+
Sbjct: 254 ERMRTNKSSPMEPTYLAQHPLFDQINELRDDICIPDYCFVGGGELQ-SLNAWFGPAGTVT 312
Query: 305 PLHHDPKKNLLSQVVGEKQIYLFPPSDSKYLYPHDHELLSNTAKVDPREPNYEIYPEYRH 364
PLHHDP N+L+QVVG+K I L+P LYP+ +L N+++VD + +P+
Sbjct: 313 PLHHDPHHNILAQVVGKKYIRLYPSFLQDELYPYSETMLCNSSQVDLDNIDETEFPKAME 372
Query: 365 AKAYYCKLNPGQMLFIPPKWWHFVESLSISFSVSFWW 401
+ C L G+ML+IPPKWWH+V SL++S SVSFWW
Sbjct: 373 LEFMDCILEEGEMLYIPPKWWHYVRSLTMSLSVSFWW 409
>At3g20810.2 68416.m02632 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain PF02373:
jmjC domain
Length = 429
Score = 214 bits (522), Expect = 1e-55
Identities = 104/227 (45%), Positives = 141/227 (62%), Gaps = 3/227 (1%)
Query: 177 SMESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVELGSKYTDSDWT 236
S+E F + L PVV+ N M +WPA TKWN +Y +AG RTV VE+G Y SDW
Sbjct: 195 SLEGFLRDYYLPGTPVVITNSMAHWPARTKWNHLDYLNAVAGNRTVPVEVGKNYLCSDWK 254
Query: 237 QKLMTVEEFIKDHIYQSNGPKG--YLAQYQLFDQIPELKADIIEPEYCCFAETENPIDVM 294
Q+L+T +F++ + P YLAQ+ LFDQI EL+ DI P+YC E +
Sbjct: 255 QELVTFSKFLERMRTNKSSPMEPTYLAQHPLFDQINELRDDICIPDYCFVGGGELQ-SLN 313
Query: 295 AWYGPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYLYPHDHELLSNTAKVDPREP 354
AW+GP GTV+PLHHDP N+L+QVVG+K I L+P LYP+ +L N+++VD
Sbjct: 314 AWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPSFLQDELYPYSETMLCNSSQVDLDNI 373
Query: 355 NYEIYPEYRHAKAYYCKLNPGQMLFIPPKWWHFVESLSISFSVSFWW 401
+ +P+ + C L G+ML+IPPKWWH+V SL++S SVSFWW
Sbjct: 374 DETEFPKAMELEFMDCILEEGEMLYIPPKWWHYVRSLTMSLSVSFWW 420
>At5g19840.1 68418.m02357 transcription factor jumonji (jmjC)
domain-containing protein low similarity to PASS1 [Homo
sapiens] GI:21591407; contains Pfam profile PF02373:
jmjC domain
Length = 505
Score = 82.2 bits (194), Expect = 6e-16
Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 259 YLAQYQLFDQIPE-------LKADIIEPEYCCFAETENPIDVMAWYGPKGTVSPLHHDPK 311
YLAQ+ + + E L+ DI P F + ++ + W S H+DP
Sbjct: 132 YLAQFPILNDEKEEKVLLKILRQDIQTPT---FLDAKSLSSINFWMNSAEARSSTHYDPH 188
Query: 312 KNLLSQVVGEKQIYLFPPSDSKYLYPHD-HELLSNTAKVDPREPNYEIYPEYRHA--KAY 368
NLL V G K++ L+PPS S LYP + SN + V PN YP H+ ++
Sbjct: 189 HNLLCVVSGRKKVVLWPPSASPSLYPMPIYGEASNHSSVGLENPNLSDYPRAEHSLKQSQ 248
Query: 369 YCKLNPGQMLFIPPKWWHFVESLSISFSVSFWW 401
LN G +FIP W+H V+S ++ +V+FWW
Sbjct: 249 EITLNAGDAVFIPEGWFHQVDSDELTVAVNFWW 281
>At5g06550.1 68418.m00739 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam PF00646: F-box
domain; contains Pfam PF02373: jmjC domain; similar to
apoptotic cell clearance receptor PtdSerR (GI:11037740)
[Mus musculus]
Length = 319
Score = 61.7 bits (143), Expect = 8e-10
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 23/232 (9%)
Query: 177 SMESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVELGSKYTDSDWT 236
S+E F T KPV+L C++ WPA+ KW+ ++Y K+ G VE +
Sbjct: 18 SVEDFITKFEEPNKPVLLEGCLDGWPAIEKWS-RDYLTKVVG----DVEFAVGPVE---- 68
Query: 237 QKLMTVEEFIKDHIYQSNGPKGYLAQYQLFDQIPELKADIIEPEYC---CFAETENPIDV 293
M +E++ + YL + +++P L ++ P Y F N
Sbjct: 69 ---MKLEKYFRYSDGAREERPLYLFDPKFAEKVPVLDSEYDVPVYFREDLFGVLGNERPD 125
Query: 294 MAWY--GPKGTVSPLHHDPKKNLL--SQVVGEKQIYLFPPS---DSKYLYPHDHELLSNT 346
W GP G+ S H DP + + G K+ LFPP + P E+
Sbjct: 126 YRWIIIGPAGSGSSFHIDPNSTSAWNAVITGSKKWVLFPPDVVPPGVHPSPDGAEVACPV 185
Query: 347 AKVDPREPNYEIYPEYRHAKAYYCKLNPGQMLFIPPKWWHFVESLSISFSVS 398
+ ++ Y+ ++ K C G+++F+P WWH V +L S +++
Sbjct: 186 SIIEWFMNFYDDTKDWEK-KPIECICKAGEVMFVPNGWWHLVINLEESIAIT 236
>At3g45880.1 68416.m04965 hypothetical protein
Length = 431
Score = 58.4 bits (135), Expect = 8e-09
Identities = 67/274 (24%), Positives = 112/274 (40%), Gaps = 47/274 (17%)
Query: 176 PSMESFYTNRILKEKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVEL------GSK 229
PS F N + + KP V+ + +WPAL W+D Y V++ L +
Sbjct: 28 PSPVKFLRNYVSQSKPCVISKAITHWPALKLWSDPAYLTGALSDDVVSLHLTPNGCADAV 87
Query: 230 YTDSDWTQKLMTVEEFIKDH---IYQSN--GPK-GYLAQYQ--LFDQIPELKADII-EPE 280
DSD VE+ + + QS+ G K GYL Q + + D + E
Sbjct: 88 TGDSDLCFASAHVEKVLFPEALKVVQSSCKGLKVGYLQQQNDCFRTEYSTVALDCDGDIE 147
Query: 281 YCCFAETENPIDVMAWYGPKGTVSPLHHDPKKNLLSQVVGEKQIYLFPPSDSKYLY---- 336
+ A +P V W G +V+ H D +NL + V GEK L PP+D LY
Sbjct: 148 WATEAFGCSPEAVNLWIGTDDSVTSFHKDHYENLYAVVSGEKHFLLLPPTDVHRLYIEQY 207
Query: 337 ---PHDHELLSNTAKVDPREP-------NYEIYPE--------------YRHAKAYYCKL 372
+ + ++ K++ EP + + YP + K ++C +
Sbjct: 208 PAANYSYHRDTDAFKLEVEEPVRHVPWSSVDPYPSPEKEASERLKFPLFFDGPKPFHCTV 267
Query: 373 NPGQMLFIPPKWWHFVESL----SISFSVSFWWD 402
G++L++P W+H V + +V++W+D
Sbjct: 268 KAGEVLYLPSMWFHHVSQTPGDGGYTIAVNYWYD 301
>At5g63080.1 68418.m07917 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain PF02373:
jmjC domain
Length = 462
Score = 48.4 bits (110), Expect = 8e-06
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 296 WYGPKGTVSPLHHDPKKNLL--SQVVGEKQIYLFPPSDSKYLYPHDHELLSNTAKVDPRE 353
+ G KG+ +PLH D ++ + V G+K+ PP S +Y + N E
Sbjct: 166 YMGGKGSWTPLHADVFRSYSWSANVCGKKRWLFLPPPQSHLVYDR---YMKNCVYDIFEE 222
Query: 354 PNYEIYPEYRHAKAYYCKLNPGQMLFIPPKWWHFVESLSISFSVSFWW 401
N +P ++ C PG+++F+P W H V +L + S++ W
Sbjct: 223 VNETKFPGFKKTTWLECIQEPGEIIFVPSGWHHQVYNLEDTISINHNW 270
>At1g78280.1 68414.m09122 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam PF00646: F-box
domain; contains Pfam PF02373: jmjC domain; similar to
apoptotic cell clearance receptor PtdSerR (GI:11037740)
[Mus musculus]
Length = 916
Score = 36.3 bits (80), Expect = 0.036
Identities = 46/222 (20%), Positives = 85/222 (38%), Gaps = 19/222 (8%)
Query: 189 EKPVVLINCMNNWPALTKWNDQNYFLKMAGLRTVAVELGSKYTDSDWTQKLMTVEEFIKD 248
+KPV+L ++WPA W K E+ + + + M +++I
Sbjct: 145 KKPVLLSGLADSWPASNTWTIDQLSEKYG-------EVPFRISQRSPNKISMKFKDYIAY 197
Query: 249 HIYQSNGPKGYLAQYQLFDQIPELKADIIEPE------YCCFAETENPIDVMAWYGPKGT 302
Q + Y+ + + PEL D P + + P GP+ +
Sbjct: 198 MKTQRDEDPLYVFDDKFGEAAPELLKDYSVPHLFQEDWFEILDKESRPPYRWLIVGPERS 257
Query: 303 VSPLHHDPKKNLL--SQVVGEKQIYLFPPSDSKY-LYPHDHELLSNTAKVDPREPNY--E 357
+ H DP + + G K+ L+PP + H +E + + P + +
Sbjct: 258 GASWHVDPALTSAWNTLLCGRKRWALYPPGKVPLGVTVHVNEDEGDVSIDTPSSLQWWLD 317
Query: 358 IYPEYRHA-KAYYCKLNPGQMLFIPPKWWHFVESLSISFSVS 398
YP K C L PG+ +++P WWH + +L + +V+
Sbjct: 318 YYPLLADEDKPIECTLLPGETIYVPSGWWHCILNLEPTVAVT 359
>At3g11760.1 68416.m01443 expressed protein
Length = 702
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 296 WYGPKGTVSPLHHDPKKNLLSQVVGEKQI 324
W GPK T+ L K+N + VGE +
Sbjct: 50 WKGPKATLGSLRRSVKRNFTKEAVGESDV 78
>At5g37780.1 68418.m04549 calmodulin-1/4 (CAM1) identical to
calmodulin 4 [Arabidopsis thaliana] GI:16223, SP|P25854
Calmodulin-1/4 {Arabidopsis thaliana}
Length = 149
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 209 DQNYFLKMAGLRTVAVELGSKYTDSDWTQKLMTVEEFIKDHIYQSNGPKGY 259
DQN F+ A LR V LG K TD + VEE I++ +G Y
Sbjct: 96 DQNGFISAAELRHVMTNLGEKLTDEE-------VEEMIREADVDGDGQINY 139
>At3g56800.1 68416.m06317 calmodulin-2/3/5 (CAM3) identical to
calmodulin GI:474183 from [Arabidopsis thaliana]; almost
identical to calmodulin-2/3/5 SP:P25069 [Arabidopsis
thaliana]
Length = 149
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 209 DQNYFLKMAGLRTVAVELGSKYTDSDWTQKLMTVEEFIKDHIYQSNGPKGY 259
DQN F+ A LR V LG K TD + V+E IK+ +G Y
Sbjct: 96 DQNGFISAAELRHVMTNLGEKLTDEE-------VDEMIKEADVDGDGQINY 139
>At3g53790.1 68416.m05943 telomere-binding protein, putative similar
to telomere binding protein TBP1 [Nicotiana glutinosa]
gi|23664357|gb|AAN39330
Length = 400
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 50 TLIKIQAIIDYMHEKINIGNWKDVKLYLRKTITISSYLKLLIYWK 94
T+ +++A++ + E++ G W+DVK + + +Y+ L WK
Sbjct: 319 TVSEVEALVQAV-ERLGTGRWRDVKSHAFNHVNHRTYVDLKDKWK 362
>At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquinone
oxidoreductase family protein contains Pfam profile:
PF05187 Electron transfer flavoprotein-ubiquinone
oxidoreductase
Length = 633
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 338 HDHELLSNTAKVDPREPNYEIYPEYRHAKAYYC 370
HDH+ S+ DP+ P +PEY ++ YC
Sbjct: 546 HDHDQPSHLRLRDPKIPEKVNFPEYAAPESRYC 578
>At2g41110.1 68415.m05078 calmodulin-2/3/5 (CAM2) (CAL1) almost
identical to Calmodulin-2/3/5 SP:P25069 from
[Arabidopsis thaliana]
Length = 149
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 209 DQNYFLKMAGLRTVAVELGSKYTDSDWTQKLMTVEEFIKDHIYQSNGPKGY 259
DQN F+ A LR V LG K TD + V+E IK+ +G Y
Sbjct: 96 DQNGFISAAELRHVMTNLGEKLTDEE-------VDEMIKEADVDGDGQINY 139
>At2g27030.3 68415.m03247 calmodulin-2/3/5 (CAM5) (TCH1) identical
to calmodulin GI:474183 from [Arabidopsis thaliana],
SP|P25069 Calmodulin-2/3/5 {Arabidopsis thaliana}
Length = 181
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 209 DQNYFLKMAGLRTVAVELGSKYTDSDWTQKLMTVEEFIKDHIYQSNGPKGY 259
DQN F+ A LR V LG K TD + V+E IK+ +G Y
Sbjct: 96 DQNGFISAAELRHVMTNLGEKLTDEE-------VDEMIKEADVDGDGQINY 139
>At2g27030.2 68415.m03246 calmodulin-2/3/5 (CAM5) (TCH1) identical
to calmodulin GI:474183 from [Arabidopsis thaliana],
SP|P25069 Calmodulin-2/3/5 {Arabidopsis thaliana}
Length = 113
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 209 DQNYFLKMAGLRTVAVELGSKYTDSDWTQKLMTVEEFIKDHIYQSNGPKGY 259
DQN F+ A LR V LG K TD + V+E IK+ +G Y
Sbjct: 60 DQNGFISAAELRHVMTNLGEKLTDEE-------VDEMIKEADVDGDGQINY 103
>At2g27030.1 68415.m03245 calmodulin-2/3/5 (CAM5) (TCH1) identical
to calmodulin GI:474183 from [Arabidopsis thaliana],
SP|P25069 Calmodulin-2/3/5 {Arabidopsis thaliana}
Length = 149
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 209 DQNYFLKMAGLRTVAVELGSKYTDSDWTQKLMTVEEFIKDHIYQSNGPKGY 259
DQN F+ A LR V LG K TD + V+E IK+ +G Y
Sbjct: 96 DQNGFISAAELRHVMTNLGEKLTDEE-------VDEMIKEADVDGDGQINY 139
>At1g66410.1 68414.m07542 calmodulin-1/4 (CAM4) identical to
calmodulin [Arabidopsis thaliana] GI:16223; nearly
identical to SP|P25854 Calmodulin-1/4 {Arabidopsis
thaliana}
Length = 149
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 209 DQNYFLKMAGLRTVAVELGSKYTDSDWTQKLMTVEEFIKDHIYQSNGPKGY 259
DQN F+ A LR V LG K TD + VEE I++ +G Y
Sbjct: 96 DQNGFISAAELRHVMTNLGEKLTDEE-------VEEMIREADVDGDGQINY 139
>At5g59430.2 68418.m07448 telomere repeat-binding protein 1 (TRP1)
identical to telomere repeat-binding protein TRP1
[Arabidopsis thaliana] GI:5459298
Length = 578
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 50 TLIKIQAIIDYMHEKINIGNWKDVKLYLRKTITISSYLKLLIYWK 94
++ +++A++ + EK+ G W+DVKL + +Y+ L WK
Sbjct: 472 SVAEVEALVQAV-EKLGTGRWRDVKLCAFEDADHRTYVDLKDKWK 515
>At5g59430.1 68418.m07447 telomere repeat-binding protein 1 (TRP1)
identical to telomere repeat-binding protein TRP1
[Arabidopsis thaliana] GI:5459298
Length = 578
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 50 TLIKIQAIIDYMHEKINIGNWKDVKLYLRKTITISSYLKLLIYWK 94
++ +++A++ + EK+ G W+DVKL + +Y+ L WK
Sbjct: 472 SVAEVEALVQAV-EKLGTGRWRDVKLCAFEDADHRTYVDLKDKWK 515
>At5g23130.1 68418.m02705 peptidoglycan-binding LysM
domain-containing protein contains Pfam profile PF01476:
LysM domain
Length = 397
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 158 VNVEPNKCNTVPVDVMDCPSMESFYT-NRILKEKPVVLINCMNNWPALTKWNDQNYFLKM 216
++ E N++P+++MD P +SF + + + + NC +N +L W + LK
Sbjct: 310 LSAETRHLNSIPINLMDAPVGDSFSSVRKSVSASSLQEPNCNSNGSSL--WPTSKWTLKP 367
Query: 217 AGLRTVAV 224
L VA+
Sbjct: 368 ELLTQVAM 375
>At5g13820.1 68418.m01615 telomeric DNA-binding protein 1 (TBP1)
identical to telomeric DNA-binding protein 1
[Arabidopsis thaliana] gi|13641340|gb|AAK31590
Length = 640
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/45 (26%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 50 TLIKIQAIIDYMHEKINIGNWKDVKLYLRKTITISSYLKLLIYWK 94
++ +++A++ + E++ G W+DVKL + + +Y+ L WK
Sbjct: 539 SVTEVEALVSAV-EEVGTGRWRDVKLRSFENASHRTYVDLKDKWK 582
>At5g49140.1 68418.m06082 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 980
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 5 LDLCRKFELFLPNVELSLSEVIELDGCTK 33
L +C K E+ ++ L+ EV++++GC K
Sbjct: 685 LTMCEKLEVIPLHINLASLEVLDMEGCLK 713
>At4g34390.1 68417.m04885 extra-large guanine nucleotide binding
protein, putative / G-protein, putative similar to
extra-large G-protein (XLG) [Arabidopsis thaliana]
GI:3201680; contains Pfam profile PF00503: G-protein
alpha subunit
Length = 861
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 2 SDVLDLCRKFELFLPNVELSLSEVIELDGCTKSLLNHFIKNPNTLNQRTLIKIQAIIDYM 61
+D++ C + N+E ++ TK L + + +P+ N+R L+ + D +
Sbjct: 688 ADLVIFCVSLTDYAENIEDGEGNIVNKMLATKQLFENMVTHPSLANKRFLL-VLTKFDLL 746
Query: 62 HEKI 65
EKI
Sbjct: 747 EEKI 750
>At3g43810.1 68416.m04682 calmodulin-7 (CAM7) almost identical to
calmodulin GI:16227 from [Arabidopsis thaliana],
SP|P59220 Calmodulin-7 {Arabidopsis thaliana}
Length = 149
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 209 DQNYFLKMAGLRTVAVELGSKYTDSD 234
DQN F+ A LR V LG K TD +
Sbjct: 96 DQNGFISAAELRHVMTNLGEKLTDEE 121
>At3g13460.2 68416.m01694 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 664
Score = 28.3 bits (60), Expect = 9.6
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 247 KDHIYQSNGPKGYLAQYQLFDQ--IPELKADIIEPEYCCFAETENPIDVMAWY--GPKGT 302
K +YQ G + Q +D+ P L +D +P C NP Y G + T
Sbjct: 32 KTAVYQYGGVDVH-GQVPSYDRSLTPMLPSDAADPSVCYVPNPYNPYQYYNVYGSGQEWT 90
Query: 303 VSPLHHDPK-KNLLSQVVGEKQIYLFPPSDSKYLYPH 338
P + +P+ ++ S + GE ++P YP+
Sbjct: 91 DYPAYTNPEGVDMNSGIYGENGTVVYPQGYGYAAYPY 127
>At3g13460.1 68416.m01693 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 667
Score = 28.3 bits (60), Expect = 9.6
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 247 KDHIYQSNGPKGYLAQYQLFDQ--IPELKADIIEPEYCCFAETENPIDVMAWY--GPKGT 302
K +YQ G + Q +D+ P L +D +P C NP Y G + T
Sbjct: 35 KTAVYQYGGVDVH-GQVPSYDRSLTPMLPSDAADPSVCYVPNPYNPYQYYNVYGSGQEWT 93
Query: 303 VSPLHHDPK-KNLLSQVVGEKQIYLFPPSDSKYLYPH 338
P + +P+ ++ S + GE ++P YP+
Sbjct: 94 DYPAYTNPEGVDMNSGIYGENGTVVYPQGYGYAAYPY 130
>At2g28580.1 68415.m03472 hypothetical protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 468
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 268 QIPELKADIIEPEYCCFAETEN---PIDVMAWYGPKGTVSPLHHDPKKNLLSQ 317
+IP L + + PE+CC + ++ A+ + PLHH K L +
Sbjct: 27 KIPGLWSSSVRPEFCCIYRVPDRLRKVNPEAYTPQMLLIGPLHHSKKAEALKR 79
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.137 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,304,508
Number of Sequences: 28952
Number of extensions: 459327
Number of successful extensions: 1105
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1075
Number of HSP's gapped (non-prelim): 34
length of query: 402
length of database: 12,070,560
effective HSP length: 83
effective length of query: 319
effective length of database: 9,667,544
effective search space: 3083946536
effective search space used: 3083946536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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