GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000458-TA|BGIBMGA000458-PA|undefined
         (67 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24FU0 Cluster: Putative uncharacterized protein; n=1; ...    32   2.5  
UniRef50_UPI0000585E87 Cluster: PREDICTED: hypothetical protein;...    31   5.8  
UniRef50_Q8G7K7 Cluster: Possible arabinogalactan endo-beta-gala...    31   5.8  
UniRef50_A2DNY6 Cluster: Putative uncharacterized protein; n=1; ...    31   5.8  
UniRef50_UPI0000E47AD9 Cluster: PREDICTED: similar to gag-pol po...    30   7.7  
UniRef50_A7RVE7 Cluster: Predicted protein; n=2; Nematostella ve...    30   7.7  

>UniRef50_Q24FU0 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2195

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 5/57 (8%)

Query: 2   FRRGIVVQVVPEWLASTSSTKQMLRT-----TTLYTTIQIGATNVWHGTTENGSSTL 53
           F    + +++P+    T++ K  +       T LYT I I   N+W GTT    + L
Sbjct: 603 FNSDYIFKIIPDTTNPTNNVKTAIVNGFVLPTNLYTDINISLVNLWTGTTNGNDANL 659


>UniRef50_UPI0000585E87 Cluster: PREDICTED: hypothetical protein;
           n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 533

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 15/35 (42%), Positives = 23/35 (65%)

Query: 31  YTTIQIGATNVWHGTTENGSSTLQSMLYYYKREKN 65
           +TT +  +  V+  T + GSSTLQ+++Y Y  EKN
Sbjct: 187 HTTCKPHSNIVYIKTHKTGSSTLQNIIYRYGDEKN 221


>UniRef50_Q8G7K7 Cluster: Possible arabinogalactan
           endo-beta-galactosidase or galactanase; n=2;
           Bifidobacterium longum|Rep: Possible arabinogalactan
           endo-beta-galactosidase or galactanase - Bifidobacterium
           longum
          Length = 897

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 6   IVVQVVPEWLASTSST--KQMLRTTTLYTTIQIGATNVWHGTTENGSSTLQSMLYYYKRE 63
           +V+       A T +T  KQ+      Y          WHGTTEN +S L+++   YK++
Sbjct: 229 VVIHFTNPEKAGTYATYAKQLSNHNVDYDVFASSYYPFWHGTTENLTSVLKNVASTYKKD 288


>UniRef50_A2DNY6 Cluster: Putative uncharacterized protein; n=1;
          Trichomonas vaginalis G3|Rep: Putative uncharacterized
          protein - Trichomonas vaginalis G3
          Length = 458

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 23 QMLRTTTLYTTIQIGATNVWHGTTENGSSTLQSMLYYYKREKNFE 67
          +++ TTT +  +   A ++ H   +N + TL+SML Y KRE N E
Sbjct: 4  RIISTTTTFYPLDTDAQDLSH---KNDNLTLKSMLMYLKRELNEE 45


>UniRef50_UPI0000E47AD9 Cluster: PREDICTED: similar to gag-pol
           polyprotein, partial; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to gag-pol
           polyprotein, partial - Strongylocentrotus purpuratus
          Length = 484

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/38 (34%), Positives = 23/38 (60%)

Query: 11  VPEWLASTSSTKQMLRTTTLYTTIQIGATNVWHGTTEN 48
           +PE    T+S++Q+ +T  + TTI I   N+   +T+N
Sbjct: 307 IPESTFETASSQQVSKTNNILTTISILTENIQKASTKN 344


>UniRef50_A7RVE7 Cluster: Predicted protein; n=2; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 2231

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)

Query: 9    QVVPEWLASTSSTKQMLRTTTLYTTIQIGATNVWHGTTENGSSTLQS 55
            +VVP WL S+SS++  + T    + ++ G        T+NG+S +QS
Sbjct: 1013 EVVPLWLLSSSSSESEMETPRQASKLRSGGKE--KNQTKNGASLVQS 1057


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.316    0.126    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,499,274
Number of Sequences: 1657284
Number of extensions: 1611928
Number of successful extensions: 5553
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5550
Number of HSP's gapped (non-prelim): 6
length of query: 67
length of database: 575,637,011
effective HSP length: 47
effective length of query: 20
effective length of database: 497,744,663
effective search space: 9954893260
effective search space used: 9954893260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)