GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000458-TA|BGIBMGA000458-PA|undefined
         (67 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   0.41 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   1.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   2.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   2.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   2.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    20   2.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   2.9  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               19   5.1  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    19   5.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        19   5.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        19   5.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        19   5.1  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    19   5.1  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          18   8.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 0.41
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 27  TTTLYTTIQIGATNVWHGTTENGSST 52
           TTT  TT     T     TT+N S+T
Sbjct: 662 TTTTTTTTTTTTTTTTPNTTQNASAT 687



 Score = 18.2 bits (35), Expect = 8.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)

Query: 29   TLYTTIQIGATNVWHGTTEN 48
            T   T    ATN+  GT +N
Sbjct: 1103 TSTVTAAAAATNIRPGTADN 1122


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 1.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 16  ASTSSTKQMLRTTTLYTTIQIGATNVWHGTTENGSST 52
           AS S  +Q   TTT+      G+  +    T N S+T
Sbjct: 743 ASPSPAEQCASTTTITARSPQGSQGLLQCATSNYSTT 779


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.2 bits (40), Expect = 2.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 30   LYTTIQIGATNVWHGTTENGSSTLQ 54
            LY TIQ    N +H T  + S  +Q
Sbjct: 1530 LYFTIQYRPINEFHWTLVSNSVKMQ 1554


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 2.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 30   LYTTIQIGATNVWHGTTENGSSTLQ 54
            LY TIQ    N +H T  + S  +Q
Sbjct: 1526 LYFTIQYRPINEFHWTLVSNSVKMQ 1550


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
          esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 2.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)

Query: 9  QVVPEWLASTSSTK 22
          Q +P W+   S+TK
Sbjct: 67 QKIPAWIGELSATK 80


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 19.8 bits (39), Expect = 2.9
 Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 2/26 (7%)

Query: 4   RGIVVQVVPEWLASTSSTKQMLRTTT 29
           +GI +Q  P+W   T ST++ +   T
Sbjct: 606 KGITIQEPPQW--HTRSTEKRVSAGT 629


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 19.8 bits (39), Expect = 2.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)

Query: 9  QVVPEWLASTSSTK 22
          Q +P W+   S+TK
Sbjct: 67 QKIPAWIGELSATK 80


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 19.0 bits (37), Expect = 5.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)

Query: 42  WHGTTENGSSTLQS 55
           W    E+G++TLQ+
Sbjct: 449 WKSILESGTTTLQT 462


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 19.0 bits (37), Expect = 5.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 10  VVPEWLASTSSTKQMLRTTTLYTTIQIGATNV 41
           ++ E + STS    +L    L+T I +G + V
Sbjct: 283 LISEIIPSTSLALPLLGKYLLFTMILVGLSVV 314


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.0 bits (37), Expect = 5.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 24  MLRTTTLYTTIQIGATNVWHGTT 46
           +LR T  Y T+ I A +   G+T
Sbjct: 445 VLRATKEYNTVPIIAESYGSGST 467


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.0 bits (37), Expect = 5.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 24  MLRTTTLYTTIQIGATNVWHGTT 46
           +LR T  Y T+ I A +   G+T
Sbjct: 445 VLRATKEYNTVPIIAESYGSGST 467


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.0 bits (37), Expect = 5.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 24  MLRTTTLYTTIQIGATNVWHGTT 46
           +LR T  Y T+ I A +   G+T
Sbjct: 445 VLRATKEYNTVPIIAESYGSGST 467


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 19.0 bits (37), Expect = 5.1
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query: 14  WLASTSSTKQMLRTTTLYTTIQI 36
           W+ S    K+  +T T Y T+++
Sbjct: 263 WMRSQFERKRGRQTYTRYQTLEL 285


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 18.2 bits (35), Expect = 8.9
 Identities = 6/22 (27%), Positives = 11/22 (50%)

Query: 14  WLASTSSTKQMLRTTTLYTTIQ 35
           W+A      +   T T++ T+Q
Sbjct: 93  WVAGAQRGNEQRCTVTMHGTVQ 114


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.126    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,011
Number of Sequences: 429
Number of extensions: 488
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of query: 67
length of database: 140,377
effective HSP length: 45
effective length of query: 22
effective length of database: 121,072
effective search space:  2663584
effective search space used:  2663584
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.0 bits)
S2: 35 (18.2 bits)