Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000457-TA|BGIBMGA000457-PA|IPR002007|Haem peroxidase,
animal, IPR010255|Haem peroxidase
         (497 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    27   0.23 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    27   0.23 
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   3.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   4.9  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   8.5  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 27.5 bits (58), Expect = 0.23
 Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)

Query: 265 YEYLPEVLGKDHMIEDEIILCNSTGFRDIYDDTVVPQIALEYAYANRLLDKNFNLIKEVP 324
           Y+++  VL   H    +I     + F D   D  +PQI+       RL   ++ L   + 
Sbjct: 190 YQFVVLVLQLQHRF-GKINRTMRSFFSDNKQDDKIPQISDNLYILCRL---HYKLTSVMQ 245

Query: 325 MVNFSLSVQSLAVDDI--MSTLTRGSY--YQATGKADFTVDPDI 364
            +N + SVQ L    +     L +  Y  Y ATGKA F   P I
Sbjct: 246 KINSAFSVQLLVSIGVSLFDVLFQAYYLYYVATGKASFVTVPMI 289


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 0.23
 Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 8/104 (7%)

Query: 265 YEYLPEVLGKDHMIEDEIILCNSTGFRDIYDDTVVPQIALEYAYANRLLDKNFNLIKEVP 324
           Y+++  VL   H    +I     + F D   D  +PQI+       RL   ++ L   + 
Sbjct: 190 YQFVVLVLQLQHRF-GKINRTMRSFFSDNKQDDKIPQISDNLYILCRL---HYKLTSVMQ 245

Query: 325 MVNFSLSVQSLAVDDI--MSTLTRGSY--YQATGKADFTVDPDI 364
            +N + SVQ L    +     L +  Y  Y ATGKA F   P I
Sbjct: 246 KINSAFSVQLLVSIGVSLFDVLFQAYYLYYVATGKASFVTVPMI 289


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 53  GLATDAKLTQLASYYGEFMAVDVTSTHDI 81
           G A+ +K+T    +YG    +  TS HD+
Sbjct: 235 GGASASKVTLSVPFYGHSWYLQSTSNHDV 263


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)

Query: 264 YYEYLPEVLGKD 275
           YYE  PE+L KD
Sbjct: 309 YYEICPEILNKD 320


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory
          receptor candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 73 VDVTSTHDILNFVVNKPYCCK 93
          + +T  +D  NFV+  P C K
Sbjct: 23 LSITPNYDFENFVIISPRCDK 43


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.137    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,310
Number of Sequences: 317
Number of extensions: 5099
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 5
length of query: 497
length of database: 114,650
effective HSP length: 60
effective length of query: 437
effective length of database: 95,630
effective search space: 41790310
effective search space used: 41790310
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)