Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000457-TA|BGIBMGA000457-PA|IPR002007|Haem peroxidase,
animal, IPR010255|Haem peroxidase
(497 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces po... 32 0.16
SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyc... 30 0.85
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 29 1.5
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 29 1.5
SPBC18E5.10 |||iron sulfur cluster assembly protein |Schizosacch... 29 2.0
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 2.6
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 28 3.4
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 27 4.5
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 27 6.0
SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit Air1|Schi... 27 7.9
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 27 7.9
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 27 7.9
>SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 811
Score = 32.3 bits (70), Expect = 0.16
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 224 FWRFHNYVAQ-QLANLNPSWDDERLFYTARDIVVAFHLQMFYYEYLPEVLGKDHMIEDEI 282
F R+HN V + + NP ++ER F + +D+V Q + Y + K + + +E+
Sbjct: 289 FARYHNGVCYLRFDDTNPEAEEERYFESIKDLVAWLGFQPYKITYSSDYFDKLYELAEEL 348
Query: 283 I 283
I
Sbjct: 349 I 349
>SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 288
Score = 29.9 bits (64), Expect = 0.85
Identities = 14/56 (25%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 233 QQLANLNPSWDDERLFYTARDIVVAFHLQMFYYEYLPEVLGKDHMIED-EIILCNS 287
QQ+ L D ++ D+++ H +++Y+ Y+ +V G+D ++ D + + C+S
Sbjct: 172 QQIPFLKRILDMDKFLLVQSDLIIPHHHELYYF-YINKVQGRDGLLFDFDKLSCSS 226
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 70 FMAVDVTSTHDILNFVVNKPYCCKEEGKSDPMCDPNFIPEFDP 112
F +VD+TS + + + P+C C P F E DP
Sbjct: 79 FESVDLTSYESVHSMIERLPFCPDHVVHCAGSCIPGFFTELDP 121
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 428 QVYETTEDIELMAEQLQEIRKASLALLLCYVGDDVEK 464
Q+Y+ D L E++ E+ + SL LL CY GD+ ++
Sbjct: 624 QLYDLKRDGTLRTEEVVELSE-SLILLCCYEGDEKDE 659
>SPBC18E5.10 |||iron sulfur cluster assembly protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 291 RDIYDDTVVPQIALEYAYANRLLDKN 316
+D Y++TV+ Q + AYA +LL KN
Sbjct: 158 KDYYEETVMMQKCIIQAYAKKLLGKN 183
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 460 DDVEKIQPKAFVIVGKGNNLVSCDEIPAIDFTHWKEE 496
D++E I P+A V++ G N++S E P ++ T +E+
Sbjct: 547 DELEDIDPRANVVLNVGPNMLSVGEAP-VESTSKEED 582
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 410 DFDDLTDHISDE---KIRQLKQVYETTEDIEL-MAEQLQEIRKASLALLLCYVGDDVEKI 465
DF+D++D ++ K+ +L Q+Y ++ + + E+L++++ SL++ L DD+ K
Sbjct: 137 DFEDISDIKLEQLSAKLNELHQIYRLRKEKNIEIKEELKKLQD-SLSIKLSMPADDLSKN 195
Query: 466 QPKAFVI 472
K +I
Sbjct: 196 GIKHLII 202
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 27.5 bits (58), Expect = 4.5
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 350 YQATGK-ADFTVDPDISNVGLGPVQEVFDIPTA--DLAKGRYFGLPSYTKYRDFCSGYSK 406
Y GK D D+ ++G+ V DI +A + K + L K ++ +
Sbjct: 34 YHILGKDIDLLSSNDLRDMGIESVGHRIDILSAIQSMKKQQKDKLQQENKDQEL-KNIEE 92
Query: 407 KHVDFDDLTDHISDEKIRQLKQV-YETTEDIELMAEQLQEIRKASLALL 454
+ ++ T+H+SD+ + K+V Y TE+ +L+ + L + L LL
Sbjct: 93 SYKKLEEKTEHLSDDNVSLEKRVEYLETENTKLV-KTLNSLNSEFLQLL 140
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 27.1 bits (57), Expect = 6.0
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 290 FRDIYDDTVVPQIALEYAYANRLLDKNFN-LIKEVPMVNFSLSVQSLAVDDIMST----- 343
FR + + PQ A + AN L K F L E MVN S+++ A I+ST
Sbjct: 217 FRCVQTELSDPQTA-QTLEANSHLKKAFTKLFSEPTMVNKSINLIVQARQQILSTAYLTA 275
Query: 344 LTRGSYYQATGKADFTVDPDISNVG 368
LTRG + ++ + + + +G
Sbjct: 276 LTRGDFLSSSRPIELSAPDTVRFIG 300
>SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit
Air1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 313
Score = 26.6 bits (56), Expect = 7.9
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 332 VQSLAVDDIMSTLTRGSYYQATGKADFTVDPDISNVGLGPVQEVFDIPTADLAKGRYFGL 391
+ SL +D ++ + G D D+S+ L ++V AD+++GRYFG
Sbjct: 25 INSLPIDQSITNSVSLEKHDFQGSDDHDSSTDLSDSTL---EDVEGSEWADVSRGRYFGS 81
Query: 392 -PSYTKYRDFCSG 403
PS + C G
Sbjct: 82 DPSESIVCHNCKG 94
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 26.6 bits (56), Expect = 7.9
Identities = 15/65 (23%), Positives = 26/65 (40%)
Query: 24 SWEGFQFRLTSSGKEYSLARHIKNNLLTVGLATDAKLTQLASYYGEFMAVDVTSTHDILN 83
S G Q + + ++ ++H N + + +D L SYYG F D I N
Sbjct: 732 SMPGTQIKSANLAEKMETSKHKVFNPKRIDVVSDLPLDYRKSYYGRFSITDTKRFSKIEN 791
Query: 84 FVVNK 88
+ +
Sbjct: 792 MRIKE 796
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 26.6 bits (56), Expect = 7.9
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 396 KYRD-FCSGYSKKHVDFDDLTD--HISDEKIRQLKQVYETT 433
++RD + SGY KKH D D D H DE R LK+ T+
Sbjct: 222 RHRDKYDSGYFKKHYDDDMRFDQGHFQDE--RDLKKYVRTS 260
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.137 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,380,348
Number of Sequences: 5004
Number of extensions: 104736
Number of successful extensions: 284
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 279
Number of HSP's gapped (non-prelim): 12
length of query: 497
length of database: 2,362,478
effective HSP length: 76
effective length of query: 421
effective length of database: 1,982,174
effective search space: 834495254
effective search space used: 834495254
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
- SilkBase 1999-2023 -