GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000456-TA|BGIBMGA000456-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like, IPR000209|Peptidase S8 and S53, subtilisin,
kexin, sedolisin
         (1448 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          29   0.17 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   2.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           25   5.0  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 29.5 bits (63), Expect = 0.17
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 325 VQNCYYFLDAIEESPENKCYGDYIDGAFDNLEVVFGSKAFSKLAS 369
           + N Y F D ++ S +N+C G  ID A  N   VF  K  +  AS
Sbjct: 202 IDNSYQFCDNLQYSFDNQCSGT-IDWALPNKRTVFIRKGGTAKAS 245


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 2.8
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 1153 SMDMSLKVWKLDGGKLSQVLVGHSDIVTCVAVSITNKTQV 1192
            S+D ++K W   G   S++++G         +  TN+TQV
Sbjct: 395  SVDYAVKFWTKKGFPKSKIVLGVPFFGRSFTLQFTNETQV 434


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 24.6 bits (51), Expect = 5.0
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 325 VQNCYYFLDAIEESPENKCYGDYIDGAFDNLEVVF 359
           + N Y F D ++ S +N+C G  ID A    E  F
Sbjct: 193 IDNSYQFCDNLQYSFDNQCSGT-IDWALPKQEDCF 226


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.133    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 310,569
Number of Sequences: 317
Number of extensions: 12242
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 4
length of query: 1448
length of database: 114,650
effective HSP length: 66
effective length of query: 1382
effective length of database: 93,728
effective search space: 129532096
effective search space used: 129532096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)