Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000455-TA|BGIBMGA000455-PA|undefined
         (121 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015296-1|AAT94525.1| 1923|Drosophila melanogaster AT26369p pro...    71   6e-13
AE013599-2711|AAM68461.1| 1922|Drosophila melanogaster CG30116-P...    71   6e-13
AE013599-2710|AAF57680.2| 1701|Drosophila melanogaster CG30116-P...    71   6e-13
AE013599-2709|AAF57681.2| 1698|Drosophila melanogaster CG30116-P...    71   6e-13
AE013599-2708|AAM68460.1| 1698|Drosophila melanogaster CG30116-P...    71   6e-13
BT024240-1|ABC86302.1|  242|Drosophila melanogaster IP16516p pro...    30   0.96 
BT011406-1|AAR96198.1|  226|Drosophila melanogaster AT21859p pro...    30   0.96 
AE013599-196|AAF57372.1|  207|Drosophila melanogaster CG9410-PA,...    30   0.96 
AE013599-195|AAM68384.1|  242|Drosophila melanogaster CG9410-PB,...    30   0.96 

>BT015296-1|AAT94525.1| 1923|Drosophila melanogaster AT26369p
          protein.
          Length = 1923

 Score = 70.5 bits (165), Expect = 6e-13
 Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 1/68 (1%)

Query: 1  MSSP-EPLVLQALQGNTQLSDKWPGPRAVKIFVASVYNDFREERRQILEIVGPELQSTYD 59
          M++P +  VL AL+G T    + P P  +KI+VAS+  +F +ERR +LE+VGPELQS YD
Sbjct: 1  MAAPIDESVLNALRGVTSAHTRLPKPLLIKIYVASLKQEFNQERRMLLELVGPELQSLYD 60

Query: 60 DRYIECLF 67
          DR IE  F
Sbjct: 61 DRQIELEF 68


>AE013599-2711|AAM68461.1| 1922|Drosophila melanogaster
          CG30116-PA, isoform A protein.
          Length = 1922

 Score = 70.5 bits (165), Expect = 6e-13
 Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 1/68 (1%)

Query: 1  MSSP-EPLVLQALQGNTQLSDKWPGPRAVKIFVASVYNDFREERRQILEIVGPELQSTYD 59
          M++P +  VL AL+G T    + P P  +KI+VAS+  +F +ERR +LE+VGPELQS YD
Sbjct: 1  MAAPIDESVLNALRGVTSAHTRLPKPLLIKIYVASLKQEFNQERRMLLELVGPELQSLYD 60

Query: 60 DRYIECLF 67
          DR IE  F
Sbjct: 61 DRQIELEF 68


>AE013599-2710|AAF57680.2| 1701|Drosophila melanogaster
          CG30116-PD, isoform D protein.
          Length = 1701

 Score = 70.5 bits (165), Expect = 6e-13
 Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 1/68 (1%)

Query: 1  MSSP-EPLVLQALQGNTQLSDKWPGPRAVKIFVASVYNDFREERRQILEIVGPELQSTYD 59
          M++P +  VL AL+G T    + P P  +KI+VAS+  +F +ERR +LE+VGPELQS YD
Sbjct: 1  MAAPIDESVLNALRGVTSAHTRLPKPLLIKIYVASLKQEFNQERRMLLELVGPELQSLYD 60

Query: 60 DRYIECLF 67
          DR IE  F
Sbjct: 61 DRQIELEF 68


>AE013599-2709|AAF57681.2| 1698|Drosophila melanogaster
          CG30116-PC, isoform C protein.
          Length = 1698

 Score = 70.5 bits (165), Expect = 6e-13
 Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 1/68 (1%)

Query: 1  MSSP-EPLVLQALQGNTQLSDKWPGPRAVKIFVASVYNDFREERRQILEIVGPELQSTYD 59
          M++P +  VL AL+G T    + P P  +KI+VAS+  +F +ERR +LE+VGPELQS YD
Sbjct: 1  MAAPIDESVLNALRGVTSAHTRLPKPLLIKIYVASLKQEFNQERRMLLELVGPELQSLYD 60

Query: 60 DRYIECLF 67
          DR IE  F
Sbjct: 61 DRQIELEF 68


>AE013599-2708|AAM68460.1| 1698|Drosophila melanogaster
          CG30116-PB, isoform B protein.
          Length = 1698

 Score = 70.5 bits (165), Expect = 6e-13
 Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 1/68 (1%)

Query: 1  MSSP-EPLVLQALQGNTQLSDKWPGPRAVKIFVASVYNDFREERRQILEIVGPELQSTYD 59
          M++P +  VL AL+G T    + P P  +KI+VAS+  +F +ERR +LE+VGPELQS YD
Sbjct: 1  MAAPIDESVLNALRGVTSAHTRLPKPLLIKIYVASLKQEFNQERRMLLELVGPELQSLYD 60

Query: 60 DRYIECLF 67
          DR IE  F
Sbjct: 61 DRQIELEF 68


>BT024240-1|ABC86302.1|  242|Drosophila melanogaster IP16516p
           protein.
          Length = 242

 Score = 29.9 bits (64), Expect = 0.96
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 11/68 (16%)

Query: 36  YNDFREERRQIL--EIVGPELQSTYDDRYIECLFGGDASLYHPVLPYKIPSDIFEQMVIS 93
           +NDFR++ R     E+VG  +Q  Y           D S YH  +PY   SD+  +   S
Sbjct: 75  FNDFRKKHRWYTKKELVGYSMQDMYS-------VVSDVSNYHKFVPYVKRSDVHSRG--S 125

Query: 94  ETAQADLV 101
           E  +ADL+
Sbjct: 126 EGFKADLI 133


>BT011406-1|AAR96198.1|  226|Drosophila melanogaster AT21859p
           protein.
          Length = 226

 Score = 29.9 bits (64), Expect = 0.96
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 11/68 (16%)

Query: 36  YNDFREERRQIL--EIVGPELQSTYDDRYIECLFGGDASLYHPVLPYKIPSDIFEQMVIS 93
           +NDFR++ R     E+VG  +Q  Y           D S YH  +PY   SD+  +   S
Sbjct: 59  FNDFRKKHRWYTKKELVGYSMQDMYS-------VVSDVSNYHKFVPYVKRSDVHSRG--S 109

Query: 94  ETAQADLV 101
           E  +ADL+
Sbjct: 110 EGFKADLI 117


>AE013599-196|AAF57372.1|  207|Drosophila melanogaster CG9410-PA,
           isoform A protein.
          Length = 207

 Score = 29.9 bits (64), Expect = 0.96
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 11/68 (16%)

Query: 36  YNDFREERRQIL--EIVGPELQSTYDDRYIECLFGGDASLYHPVLPYKIPSDIFEQMVIS 93
           +NDFR++ R     E+VG  +Q  Y           D S YH  +PY   SD+  +   S
Sbjct: 40  FNDFRKKHRWYTKKELVGYSMQDMYS-------VVSDVSNYHKFVPYVKRSDVHSRG--S 90

Query: 94  ETAQADLV 101
           E  +ADL+
Sbjct: 91  EGFKADLI 98


>AE013599-195|AAM68384.1|  242|Drosophila melanogaster CG9410-PB,
           isoform B protein.
          Length = 242

 Score = 29.9 bits (64), Expect = 0.96
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 11/68 (16%)

Query: 36  YNDFREERRQIL--EIVGPELQSTYDDRYIECLFGGDASLYHPVLPYKIPSDIFEQMVIS 93
           +NDFR++ R     E+VG  +Q  Y           D S YH  +PY   SD+  +   S
Sbjct: 75  FNDFRKKHRWYTKKELVGYSMQDMYS-------VVSDVSNYHKFVPYVKRSDVHSRG--S 125

Query: 94  ETAQADLV 101
           E  +ADL+
Sbjct: 126 EGFKADLI 133


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.138    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,274,677
Number of Sequences: 52641
Number of extensions: 238830
Number of successful extensions: 426
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 416
Number of HSP's gapped (non-prelim): 14
length of query: 121
length of database: 24,830,863
effective HSP length: 76
effective length of query: 45
effective length of database: 20,830,147
effective search space: 937356615
effective search space used: 937356615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)