GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000455-TA|BGIBMGA000455-PA|undefined
         (121 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   5.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   5.2  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)

Query: 5   EPLVLQALQGNTQLSDK 21
           EPL +  L GN   SDK
Sbjct: 271 EPLAVYGLDGNDSASDK 287


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/25 (32%), Positives = 16/25 (64%)

Query: 69  GDASLYHPVLPYKIPSDIFEQMVIS 93
           G AS + P+L    P  ++E++++S
Sbjct: 491 GLASSFRPILLLNNPGKVYERLLLS 515


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.138    0.418 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,425
Number of Sequences: 2123
Number of extensions: 4965
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 2
length of query: 121
length of database: 516,269
effective HSP length: 57
effective length of query: 64
effective length of database: 395,258
effective search space: 25296512
effective search space used: 25296512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)