Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000455-TA|BGIBMGA000455-PA|undefined
(121 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g74110.1 68414.m08583 cytochrome P450 family protein similar ... 29 0.64
At4g24600.1 68417.m03524 hypothetical protein 29 0.85
At4g24200.1 68417.m03474 expressed protein hypothetical protein ... 28 2.0
At2g13126.1 68415.m01443 hypothetical protein likely a pseudogene 27 3.4
At4g35780.1 68417.m05080 protein kinase family protein similar t... 27 4.5
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 26 6.0
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 26 7.9
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 26 7.9
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 26 7.9
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 26 7.9
At1g62935.1 68414.m07106 hypothetical protein 26 7.9
>At1g74110.1 68414.m08583 cytochrome P450 family protein similar to
Cytochrome P450 78A4 (SP:O65012) Cytochrome P450 78A4
[Pinus radiata]; similar to cytochrome P-450 GB:AAB37231
from [Phalaenopsis sp. SM9108]
Length = 537
Score = 29.5 bits (63), Expect = 0.64
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 28 VKIFVASVYNDFREERRQILEIVGPELQSTYDDRYIECLFG 68
V +FV + ND + +R + + PE +STYDD +++ L G
Sbjct: 281 VNVFVGKIINDHKS-KRSLRD--NPE-ESTYDDDFVDVLLG 317
>At4g24600.1 68417.m03524 hypothetical protein
Length = 124
Score = 29.1 bits (62), Expect = 0.85
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 29 KIFVASVYNDFREERRQILEIVGPEL-QSTYDDRYIECLFGGDASLYHPVLPYKIPSDIF 87
K+ V DF +E + L++ G L + Y +R G + H PY+ P D+
Sbjct: 49 KVLVGHENLDFIKENEKSLQVQGFRLIKPPYRERKCVICDGSVQTSRHKRYPYERPYDVA 108
Query: 88 EQMVISE 94
+++++ E
Sbjct: 109 DRLILQE 115
>At4g24200.1 68417.m03474 expressed protein hypothetical protein -
Arabidopsis thaliana,PIR2:T06677
Length = 1000
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Query: 72 SLYHPVLPYKIPS-DIFEQMVIS 93
S++H LP+K+PS D+ E+ VIS
Sbjct: 641 SVFHSALPHKVPSGDLREKQVIS 663
>At2g13126.1 68415.m01443 hypothetical protein likely a pseudogene
Length = 60
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 82 IPSDIFEQMVISETAQADLVRACYRLSSDGIYHLEDDD 119
+P D+ E ++S Q L + C L++DGI +LE D
Sbjct: 6 LPHDL-ELEILSREFQPHLQKNCKLLANDGILYLEIQD 42
>At4g35780.1 68417.m05080 protein kinase family protein similar to
protein kinase [gi:170047] from Glycine max,
[gi:13124865] from Arachis hypogaea; contains Pfam
protein kinase domain PF00069
Length = 570
Score = 26.6 bits (56), Expect = 4.5
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 24 GPRAVKIFVASVYNDFREERRQILEIVGPELQSTYDDRYIECLFGG 69
G RAV VAS+ + + R LE+ G LQ + Y E F G
Sbjct: 12 GSRAV---VASITKESPRQHRMKLEVYGEVLQRIQESNYEEANFPG 54
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 41 EERRQILEIVGPELQSTYDDRYIEC 65
E RR+ LEI E ++ Y+D + EC
Sbjct: 257 ETRRKHLEIQVSEFKAKYEDAFAEC 281
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 19 SDKWPGPRAVKIFVASVYNDFREERRQILEIVGPELQSTYDDRYIECLFGGDASLY 74
S++W G R+ Q + I+G L + +D I C GDAS +
Sbjct: 132 SNEWTGARSFNRKSLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTH 187
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 19 SDKWPGPRAVKIFVASVYNDFREERRQILEIVGPELQSTYDDRYIECLFGGDASLY 74
S++W G R+ Q + I+G L + +D I C GDAS +
Sbjct: 132 SNEWTGARSFNRKSLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTH 187
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 19 SDKWPGPRAVKIFVASVYNDFREERRQILEIVGPELQSTYDDRYIECLFGGDASLY 74
S++W G R+ Q + I+G L + +D I C GDAS +
Sbjct: 132 SNEWTGARSFNRKSLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTH 187
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 19 SDKWPGPRAVKIFVASVYNDFREERRQILEIVGPELQSTYDDRYIECLFGGDASLY 74
S++W G R+ Q + I+G L + +D I C GDAS +
Sbjct: 132 SNEWTGARSFNRKSLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTH 187
>At1g62935.1 68414.m07106 hypothetical protein
Length = 176
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/17 (52%), Positives = 15/17 (88%)
Query: 28 VKIFVASVYNDFREERR 44
++ ++A+VYN +REERR
Sbjct: 154 IEDYIANVYNGWREERR 170
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.138 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,030,856
Number of Sequences: 28952
Number of extensions: 115416
Number of successful extensions: 245
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 243
Number of HSP's gapped (non-prelim): 11
length of query: 121
length of database: 12,070,560
effective HSP length: 73
effective length of query: 48
effective length of database: 9,957,064
effective search space: 477939072
effective search space used: 477939072
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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