Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000454-TA|BGIBMGA000454-PA|IPR001478|PDZ/DHR/GLGF,
IPR000008|C2 calcium-dependent membrane targeting, IPR000198|RhoGAP,
IPR008936|Rho GTPase activation protein, IPR008973|C2
calcium/lipid-binding region, CaLB
(1292 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g08340.1 68414.m00922 rac GTPase activating protein, putative... 50 1e-05
At5g22400.1 68418.m02613 rac GTPase activating protein, putative... 45 3e-04
At1g20080.1 68414.m02513 C2 domain-containing protein contains I... 45 3e-04
At4g03100.1 68417.m00418 rac GTPase activating protein, putative... 44 5e-04
At5g46390.2 68418.m05710 peptidase S41 family protein similar to... 42 0.003
At5g46390.1 68418.m05709 peptidase S41 family protein similar to... 42 0.003
At5g61530.1 68418.m07720 small G protein family protein / RhoGAP... 41 0.006
At5g12150.1 68418.m01426 pleckstrin homology (PH) domain-contain... 40 0.008
At5g19390.2 68418.m02311 pleckstrin homology (PH) domain-contain... 40 0.014
At5g19390.1 68418.m02310 pleckstrin homology (PH) domain-contain... 40 0.014
At3g11490.1 68416.m01401 rac GTPase activating protein, putative... 39 0.019
At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-contain... 39 0.025
At2g27440.1 68415.m03316 rac GTPase activating protein, putative... 36 0.18
At2g46270.2 68415.m05754 G-box binding factor 3 (GBF3) identical... 35 0.41
At2g46270.1 68415.m05753 G-box binding factor 3 (GBF3) identical... 35 0.41
At2g21010.1 68415.m02489 C2 domain-containing protein contains I... 34 0.54
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 34 0.71
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 34 0.71
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 34 0.71
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 34 0.71
At3g04160.1 68416.m00440 expressed protein ; expression supporte... 33 0.94
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 33 1.2
At2g46710.1 68415.m05828 rac GTPase activating protein, putative... 33 1.6
At5g50180.1 68418.m06214 protein kinase, putative similar to pro... 32 2.2
At2g32310.1 68415.m03950 expressed protein 32 2.2
At2g20990.1 68415.m02485 C2 domain-containing protein (sytA) sim... 32 2.9
At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein ... 32 2.9
At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family... 31 3.8
At1g02110.1 68414.m00137 proline-rich family protein contains pr... 31 3.8
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 31 5.0
At5g58050.1 68418.m07265 glycerophosphoryl diester phosphodieste... 31 6.6
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 31 6.6
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 30 8.8
At4g03090.1 68417.m00417 expressed protein 30 8.8
At3g08670.1 68416.m01007 expressed protein 30 8.8
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 30 8.8
At1g49270.1 68414.m05524 protein kinase family protein contains ... 30 8.8
>At1g08340.1 68414.m00922 rac GTPase activating protein, putative
similar to rac GTPase activating protein 1 GI:3695059
from [Lotus japonicus]; contains Pfam profile PF00620:
RhoGAP domain
Length = 331
Score = 50.0 bits (114), Expect = 1e-05
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLF 991
GL G++R+ G S++ +RE + + P+ + D++ + G++K + RELP+ +
Sbjct: 80 GLQAEGVFRITGENSEEEFVREQLNKG-----IIPDGI-DVHCLAGLIKAWFRELPRGVL 133
Query: 992 SRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNK 1051
+ + C D+ +V LP+ + L + ++ +A V+ + NK
Sbjct: 134 DPLPSEQVMQ----CESDED------FVKVVRLLPQTEASLLNWAINLMADVIQFEHVNK 183
Query: 1052 MSPQHLAVALAPPLMLHSSPPGELDYQRPIHVLQCLLQIWPPPKRSGRAQSSV 1104
M+ ++LA+ AP + + P L Y + V++ L + R A SSV
Sbjct: 184 MNSRNLALVFAPNMSQMADPLTALMY--AVQVMKLLKSLTEKTVREREASSSV 234
>At5g22400.1 68418.m02613 rac GTPase activating protein, putative
similar to rac GTPase activating protein 1 [Lotus
japonicus] GI:3695059; contains Pfam profile PF00620:
RhoGAP domain
Length = 466
Score = 45.2 bits (102), Expect = 3e-04
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLF 991
GL G++RL S++ +RE R PE + D++ + G++K + RELP +
Sbjct: 194 GLQAEGIFRLTAENSEEEAVREQLNRG-----FIPERI-DVHCLAGLIKAWFRELPTSV- 246
Query: 992 SRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNK 1051
L ++ + + C ++ +V LP A L + ++ +A VV + NK
Sbjct: 247 ---LDSLSPEQVMQCQTEEEN------VELVRLLPPTEAALLDWAINLMADVVQYEHLNK 297
Query: 1052 MSPQHLAVALAPPLMLHSSPPGELDY 1077
M+ +++A+ AP + P L Y
Sbjct: 298 MNSRNIAMVFAPNMTQMDDPLTALMY 323
>At1g20080.1 68414.m02513 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 535
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 789 LECDRVHKARTVIRNSELDFDWDEAFDLEL--VDNRQLDVLVYSWDPQHRHKLCYRGVIT 846
L D+V +TV+++S L+ +W+E FDL + ++++L ++VY W+ +H VI
Sbjct: 287 LSGDKVPGKKTVVKHSNLNPEWNEEFDLVVKEPESQELQLIVYDWEQVGKHDKIGMNVIQ 346
Query: 847 LPDL 850
L DL
Sbjct: 347 LKDL 350
>At4g03100.1 68417.m00418 rac GTPase activating protein, putative
similar to rac GTPase activating protein 3 [Lotus
japonicus] GI:3695063; contains Pfam profile PF00620:
RhoGAP domain
Length = 430
Score = 44.4 bits (100), Expect = 5e-04
Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 17/194 (8%)
Query: 878 PHELFRRRPTQGRVSPPPLFGSELEAVVAREIRPPNAPPVPLXXXXXXXXXXXXGLDIIG 937
PHEL P + + +FG E++ N+ P L GL G
Sbjct: 104 PHELQVEIPCRVPSASVSVFGVSAESMQCSYDEKGNSVPTILLLMQERLYSQQ-GLKAEG 162
Query: 938 LYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLFSRCLFQ 997
++R+ S++ +R+ R + PE + D++ + G++K + RELP + +
Sbjct: 163 IFRINPENSQEEHVRDQLNRG-----IVPENI-DVHCLAGLIKAWFRELPSGVLDGLSPE 216
Query: 998 MTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNKMSPQHL 1057
L+ C +D +++ L A L + +D +A VV ++ NKM+ +++
Sbjct: 217 EVLN----CNTEDES------VELIKQLKPTESALLNWAVDLMADVVEEEESNKMNARNI 266
Query: 1058 AVALAPPLMLHSSP 1071
A+ AP + + P
Sbjct: 267 AMVFAPNMTQMTDP 280
>At5g46390.2 68418.m05710 peptidase S41 family protein similar to
C-terminal peptidase of the D1 protein [Hordeum vulgare
subsp vulgare] GI:1296805; contains Pfam profiles
PF03572: Peptidase family S41B, PF00595: PDZ domain
(Also known as DHR or GLGF)
Length = 489
Score = 41.9 bits (94), Expect = 0.003
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 123 LGLYIREGDGGTRTDGVFISRIALESAVYNSGCLKVGDEILAVNLVDVRRMSLDDVVIIM 182
+G+ +RE G + + + L+SA +G +K GDEILAVN +DV S +V ++
Sbjct: 200 IGINLREVSDGGGNVKLKVLGLVLDSAADIAG-VKQGDEILAVNGMDVSGKSSFEVSSLL 258
Query: 183 SIPRRLLLCTRQRKGKSGP-GSPSLPRSEHKPPPV 216
P + + + + GK GP S + R + PV
Sbjct: 259 QGPSKTFVVLKVKHGKCGPVKSLKIQRQVNAQTPV 293
>At5g46390.1 68418.m05709 peptidase S41 family protein similar to
C-terminal peptidase of the D1 protein [Hordeum vulgare
subsp vulgare] GI:1296805; contains Pfam profiles
PF03572: Peptidase family S41B, PF00595: PDZ domain
(Also known as DHR or GLGF)
Length = 428
Score = 41.9 bits (94), Expect = 0.003
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 123 LGLYIREGDGGTRTDGVFISRIALESAVYNSGCLKVGDEILAVNLVDVRRMSLDDVVIIM 182
+G+ +RE G + + + L+SA +G +K GDEILAVN +DV S +V ++
Sbjct: 200 IGINLREVSDGGGNVKLKVLGLVLDSAADIAG-VKQGDEILAVNGMDVSGKSSFEVSSLL 258
Query: 183 SIPRRLLLCTRQRKGKSGP-GSPSLPRSEHKPPPV 216
P + + + + GK GP S + R + PV
Sbjct: 259 QGPSKTFVVLKVKHGKCGPVKSLKIQRQVNAQTPV 293
>At5g61530.1 68418.m07720 small G protein family protein / RhoGAP
family protein contains Pfam domain, PF00620: RhoGAP
domain
Length = 376
Score = 40.7 bits (91), Expect = 0.006
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 15/179 (8%)
Query: 888 QGRVSPPPLFGSELEAVVAREIRPPNAPPVPLXXXXXXXXXXXXGLDIIGLYRLCGAASK 947
Q V+ +FG +E V R+ ++ P+PL GL+ L++ G
Sbjct: 128 QKGVASSDVFGVAIEITVQRQ---ESSRPIPLILVKCADYLILTGLNSPNLFKAEGDRKL 184
Query: 948 KRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLFSRCLFQMTLDALGVCL 1007
+ L + ++ R PE V ++V +LK YL LP PL + L+ DA
Sbjct: 185 IQQLVSAYNQDPRAS--IPEGVNPVDV-AALLKYYLASLPTPLTTFELYNEIKDA----- 236
Query: 1008 PDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNKMSPQHLAVALAPPLM 1066
R R+ S+ + L TL F+ L V NKM LA+ +AP +M
Sbjct: 237 ---RSSIHRMRQSLQK-LSNVNYNTLEFITALLLRVSQKSLLNKMDSHSLAMEMAPVIM 291
>At5g12150.1 68418.m01426 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to glucocorticoid receptor DNA binding factor
1 [Canis familiaris] GI:23266717; contains Pfam profiles
PF00169: PH domain, PF00620: RhoGAP domain
Length = 827
Score = 40.3 bits (90), Expect = 0.008
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQ-PL 990
G + G+ R +A + V R E E +PE P +V+ +K LR+LP P+
Sbjct: 195 GTKVEGILRQ--SADVEEVERRVQEYEQGKTEFSPEEDP--HVVGDCVKHVLRQLPSSPV 250
Query: 991 FSRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRN 1050
+ C + L+A + + R + R ++I+E P R L+ +L + + + N
Sbjct: 251 PASCCTAL-LEAYKIDQNEARVNSLR--SAIIETFPEPNRRLLLRMLKMMHTITSHSSEN 307
Query: 1051 KMSPQHLAVALAPPLMLHSSPPGELDYQ 1078
+M+ +A ++ PL+L GE D +
Sbjct: 308 RMTSSAVAACMS-PLLLRPLLAGECDLE 334
>At5g19390.2 68418.m02311 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to rho-GTPase activating protein [Homo
sapiens] GI:14245732; contains Pfam profiles PF00169: PH
domain, PF00620: RhoGAP domain
Length = 870
Score = 39.5 bits (88), Expect = 0.014
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 971 DINVITGVLKDYLRELPQPLFSRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAAR 1030
D +V+ +K LRELP S L+A + + R + R ++I E P R
Sbjct: 225 DPHVVGDCIKHVLRELPSSPVSASCCTALLEAYRIESKEARISSLR--SAIAETFPEPNR 282
Query: 1031 ATLVFLLDHLALVVAAQDRNKMSPQHLAVALAPPLMLHSSPPGELDYQ 1078
L +L + + + N+M+P +A +A PL+L GE D +
Sbjct: 283 RLLQRILKMMHTISSHSHENRMNPNAVAACMA-PLLLRPLLAGECDLE 329
>At5g19390.1 68418.m02310 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to rho-GTPase activating protein [Homo
sapiens] GI:14245732; contains Pfam profiles PF00169: PH
domain, PF00620: RhoGAP domain
Length = 822
Score = 39.5 bits (88), Expect = 0.014
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 971 DINVITGVLKDYLRELPQPLFSRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAAR 1030
D +V+ +K LRELP S L+A + + R + R ++I E P R
Sbjct: 225 DPHVVGDCIKHVLRELPSSPVSASCCTALLEAYRIESKEARISSLR--SAIAETFPEPNR 282
Query: 1031 ATLVFLLDHLALVVAAQDRNKMSPQHLAVALAPPLMLHSSPPGELDYQ 1078
L +L + + + N+M+P +A +A PL+L GE D +
Sbjct: 283 RLLQRILKMMHTISSHSHENRMNPNAVAACMA-PLLLRPLLAGECDLE 329
>At3g11490.1 68416.m01401 rac GTPase activating protein, putative
similar to rac GTPase activating protein 1 GB:AAC62624
GI:3695059 [Lotus japonicus]; contains Pfam profile
PF00620: RhoGAP domain
Length = 435
Score = 39.1 bits (87), Expect = 0.019
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLF 991
GL + G++R+ G ++ +RE + + P+ + D++ + ++K + RELP +
Sbjct: 170 GLRVEGIFRINGENGQEEYIREELNKG-----IIPDNI-DVHCLASLIKAWFRELPSGV- 222
Query: 992 SRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNK 1051
LD+L + E + +V LP + L + ++ +A VV + NK
Sbjct: 223 --------LDSLSPEQVMESESEDECV-ELVRLLPSTEASLLDWAINLMADVVEMEQLNK 273
Query: 1052 MSPQHLAVALAPPLMLHSSPPGELDY 1077
M+ +++A+ AP + P L Y
Sbjct: 274 MNARNIAMVFAPNMTQMLDPLTALMY 299
>At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-containing
protein-related / RhoGAP domain-containing protein
contains Pfam domain, PF00620: RhoGAP domain
Length = 902
Score = 38.7 bits (86), Expect = 0.025
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 963 ELTPEAVPDINVITGVLKDYLRELPQ-PLFSRCLFQMTLDALGVCLPDDREGNARLMASI 1021
E +PE D ++I LK +LRELP P+ + C + L C D + A+I
Sbjct: 265 EFSPEE--DAHIIADCLKYFLRELPSSPVPASCCNAL----LEACRTDRGNRVNAMRAAI 318
Query: 1022 VECLPRAARATLVFLLDHLALVVAAQDRNKMSPQHLAVALAPPLMLHSSPPGELDYQRPI 1081
E P R L +L + V + + N+M+ +A +A PL+L G+ + +
Sbjct: 319 CESFPEPNRRLLQRILMMMQTVASNKTVNRMNTNAVAACMA-PLLLRPLLAGDCEIENDF 377
Query: 1082 HV 1083
V
Sbjct: 378 DV 379
>At2g27440.1 68415.m03316 rac GTPase activating protein, putative
similar to rac GTPase activating protein 3 [Lotus
japonicus] GI:3695063; contains Pfam profiles PF00620:
RhoGAP domain, PF00786: P21-Rho-binding domain
Length = 368
Score = 35.9 bits (79), Expect = 0.18
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQ 988
GL + G++R+ G S++ +RE + + PE + DI+ + G++K + RELP+
Sbjct: 166 GLQVEGIFRITGDNSEEEFIREELNKG-----VLPEGI-DIHCLAGLIKAWFRELPK 216
>At2g46270.2 68415.m05754 G-box binding factor 3 (GBF3) identical to
G-box binding factor 3 (GBF3) SP:P42776 from
[Arabidopsis thaliana]; contains Pfam profile: PF00170
bZIP transcription factor
Length = 359
Score = 34.7 bits (76), Expect = 0.41
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 278 PDSAALDLYYNPR---PPSDHSTW--SYRPPPPVITEQPKSSATHFVPYERSYPN 327
PD AA+ YY PR PP +S S PPPP + + + PY YP+
Sbjct: 31 PDWAAMQAYYGPRVAMPPYYNSAMAASGHPPPPYMWNPQHMMSPYGAPYAAVYPH 85
>At2g46270.1 68415.m05753 G-box binding factor 3 (GBF3) identical to
G-box binding factor 3 (GBF3) SP:P42776 from
[Arabidopsis thaliana]; contains Pfam profile: PF00170
bZIP transcription factor
Length = 382
Score = 34.7 bits (76), Expect = 0.41
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 278 PDSAALDLYYNPR---PPSDHSTW--SYRPPPPVITEQPKSSATHFVPYERSYPN 327
PD AA+ YY PR PP +S S PPPP + + + PY YP+
Sbjct: 31 PDWAAMQAYYGPRVAMPPYYNSAMAASGHPPPPYMWNPQHMMSPYGAPYAAVYPH 85
>At2g21010.1 68415.m02489 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 256
Score = 34.3 bits (75), Expect = 0.54
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 792 DRVHKARTVIRNSELDFDWDEAFDLELVD--NRQLDVLVYSWDPQHRHKLCYRGVITLPD 849
D++ +T +++ L+ +W+E F + D + L+ VY W+ +H V+ L +
Sbjct: 15 DKISSKKTTVKHKNLNPEWNEEFKFSVRDPKTQVLEFNVYGWEKIGKHDKMGMNVLALKE 74
Query: 850 LVARSAMHQLAIKLEPRGTL 869
L + + A LE R TL
Sbjct: 75 L---APDERKAFTLELRKTL 91
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 33.9 bits (74), Expect = 0.71
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 286 YYNPRPPSDHSTWSY-RPPPPVITEQPKSSATHFVPYERSYPNTLDSLAEKVHS 338
Y P PPS Y +PPPP+ + QP S+ ++ P +SY + E+ +S
Sbjct: 44 YNYPPPPSYAQPPEYTQPPPPLYSTQPYSAPSYSAPPSQSYGSDNKKRLERKYS 97
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 33.9 bits (74), Expect = 0.71
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 286 YYNPRPPSDHSTWSY-RPPPPVITEQPKSSATHFVPYERSYPNTLDSLAEKVHS 338
Y P PPS Y +PPPP+ + QP S+ ++ P +SY + E+ +S
Sbjct: 44 YNYPPPPSYAQPPEYTQPPPPLYSTQPYSAPSYSAPPSQSYGSDNKKRLERKYS 97
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 33.9 bits (74), Expect = 0.71
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 286 YYNPRPPSDHSTWSY-RPPPPVITEQPKSSATHFVPYERSYPNTLDSLAEKVHS 338
Y P PPS Y +PPPP+ + QP S+ ++ P +SY + E+ +S
Sbjct: 44 YNYPPPPSYAQPPEYTQPPPPLYSTQPYSAPSYSAPPSQSYGSDNKKRLERKYS 97
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 33.9 bits (74), Expect = 0.71
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 286 YYNPRPPSDHSTWSY-RPPPPVITEQPKSSATHFVPYERSYPNTLDSLAEKVHS 338
Y P PPS Y +PPPP+ + QP S+ ++ P +SY + E+ +S
Sbjct: 44 YNYPPPPSYAQPPEYTQPPPPLYSTQPYSAPSYSAPPSQSYGSDNKKRLERKYS 97
>At3g04160.1 68416.m00440 expressed protein ; expression supported
by MPSS
Length = 712
Score = 33.5 bits (73), Expect = 0.94
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 284 DLYYNPRPPSDHSTWSYRPPPPVITEQPKSSATHFVPYERSYPNTLDSL 332
+L+Y+ PP+ + + +RPPPP + S P R TL SL
Sbjct: 16 NLFYHYPPPNSNPNFFFRPPPPPLQNPNNYSIVPSPPPIRELSGTLSSL 64
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 288 NPRPPSDHSTWSYRPPPPV-ITEQPKSSATHFVPYERSYPNTLDSLAEKVHSYYPP 342
NP PP S + P PPV + P+SS+ P S PN+ + E + PP
Sbjct: 108 NPNPPDSSSNPNSNPNPPVTVPNPPESSSNPNPPDSSSNPNSNPNPPESSSNPNPP 163
Score = 31.5 bits (68), Expect = 3.8
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 288 NPRPPSDHSTWSYRPPPPVITEQPKSSATHFVPYE-RSYPNTLDSLAE---KVHSYYPPE 343
NP PP S + P PP + P T P E S PN +S + + YPPE
Sbjct: 137 NPNPPDSSSNPNSNPNPPESSSNPNPPVTVPNPPESSSNPNPPESSSNPNPPITIPYPPE 196
Query: 344 SGS 346
S S
Sbjct: 197 SSS 199
>At2g46710.1 68415.m05828 rac GTPase activating protein, putative
similar to rac GTPase activating protein 2 [Lotus
japonicus] GI:3695061; contains Pfam profiles PF00620:
RhoGAP domain, PF00786: P21-Rho-binding domain
Length = 455
Score = 32.7 bits (71), Expect = 1.6
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 16/140 (11%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLF 991
GL G++R+ K+ +R + N V P + D++ + G++K + RELP +
Sbjct: 182 GLKAEGIFRINPDNGKEEHVRR--QLNCGVV---PRGI-DVHCLAGLIKAWFRELPTGV- 234
Query: 992 SRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNK 1051
L +T + + C + E +RL V LP A L + + +A VV + NK
Sbjct: 235 ---LDVLTPEQVMRC--NTEEDCSRL----VILLPPVESAILDWAIGLMADVVEHEQFNK 285
Query: 1052 MSPQHLAVALAPPLMLHSSP 1071
M+ +++A+ AP + + P
Sbjct: 286 MNARNVAMVFAPNMTQMADP 305
>At5g50180.1 68418.m06214 protein kinase, putative similar to protein
kinase ATN1 [Arabidopsis thaliana]
gi|1054633|emb|CAA63387
Length = 346
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 966 PEAVPDINVITGVLKDYLRELPQPLFSRCLFQMTLDALGVCLPDDREGNARLMASIVEC 1024
P A P+ I +L +YL ++ P+ + + Q L + LP D G + LMA + EC
Sbjct: 267 PNARPNFTHIIELLLNYLSKVGSPISA--IPQRILASKNTLLPPDSPGTSSLMAKLDEC 323
>At2g32310.1 68415.m03950 expressed protein
Length = 325
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 276 LSPDSAALDLYYNPRPPSDHSTWSYRPPPPVITEQPKSSATHFV 319
L L L NPRP S + Y+PPPP + P SS+ H +
Sbjct: 30 LGDAETTLPLNINPRPEPVPSQFQYQPPPP---QLPLSSSLHAI 70
>At2g20990.1 68415.m02485 C2 domain-containing protein (sytA)
similar to Ca2+-dependent lipid-binding protein (CLB1)
GI:2789434 from [Lycopersicon esculentum]
Length = 541
Score = 31.9 bits (69), Expect = 2.9
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 792 DRVHKARTVIRNSELDFDWDEAFDLELVD--NRQLDVLVYSWDPQHRHKLCYRGVITLPD 849
D++ +T +++ L+ +W+E F + D + L+ VY W+ + V+ L +
Sbjct: 292 DKIPSKKTTVKHKNLNPEWNEEFKFSVRDPQTQVLEFSVYDWEQVGNPEKMGMNVLALKE 351
Query: 850 LVARSAMHQLAIKLEPRGTL 869
+V H+ A LE R TL
Sbjct: 352 MVPDE--HK-AFTLELRKTL 368
>At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein
contains Pfam profile: PF01363 FYVE zinc finger
Length = 601
Score = 31.9 bits (69), Expect = 2.9
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 292 PSDHSTWSYRPPPPVITEQPKSSATHF---VPYER-----SYPNTLDSLAEKVHSYYPPE 343
P+ +ST++ PPPP I QP SS F PY++ Y + D +S PP
Sbjct: 105 PNSYSTFNQPPPPPTIHPQPLSSYGSFDSTAPYQQPTSQHMYYSPYDQHQTSGYSSAPPP 164
Query: 344 SGS 346
S +
Sbjct: 165 SSA 167
>At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family
protein
Length = 846
Score = 31.5 bits (68), Expect = 3.8
Identities = 23/73 (31%), Positives = 27/73 (36%), Gaps = 3/73 (4%)
Query: 292 PSDHSTWSYRPPPPVITEQPKSSATHFVPYERSYPNTLDSLAEKVHSYYPPESGSTRFG- 350
PS H + PPPP T+ P H PY R P + + Y PP T G
Sbjct: 737 PSVHQPTASSPPPPPETQNPSHPHPH-APYYRP-PEQMSRPGYSIPPYGPPPPYHTPHGQ 794
Query: 351 GRVPRSGSEQQLP 363
P QQ P
Sbjct: 795 APQPYPPQAQQQP 807
>At1g02110.1 68414.m00137 proline-rich family protein contains
proline-rich domain, INTERPRO:IPR000694
Length = 679
Score = 31.5 bits (68), Expect = 3.8
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 289 PRPPSDHSTWSYRPPPPVITEQPKSSATHFVPYERSYPNTLDSLAEKVHSYYPPESGSTR 348
PR PS HS PPPP I +PK + +P+ S + S A S+YP ++
Sbjct: 81 PRVPSSHSP---EPPPPPIRSKPKPTRPRRLPHILSDSSPSSSPAT---SFYPTAHQNST 134
Query: 349 FGGRVPRSGS 358
+ R P S
Sbjct: 135 Y-SRSPSQAS 143
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 31.1 bits (67), Expect = 5.0
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 287 YNPRPPSDHSTWSYRPPPPVITEQPKSSATHFVPYERSYPNTLDSLAEKVHSYYPP 342
Y+P PP +S PPPPV + P P S P + S VHS PP
Sbjct: 516 YSPPPPPP--VYSPPPPPPVYSPPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPP 569
Score = 30.7 bits (66), Expect = 6.6
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 287 YNPRPPSDHSTWS--YRPPPPVITEQPKSSATHFVPYERSYPNTLDSLAEKVHSYYPP 342
Y+P PP HS + PPPPV + P + P S P + S VHS PP
Sbjct: 585 YSPPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPPPVHSPPPPVFSPPPPVHSPPPP 642
>At5g58050.1 68418.m07265 glycerophosphoryl diester phosphodiesterase
family protein contains Pfam PF03009 : Glycerophosphoryl
diester phosphodiesterase family; similar to
Glycerophosphoryl diester phosphodiesterase precursor
(Glycerophosphodiester phosphodiesterase)
(Surface-exposed lipoprotein D) (Protein D)
(ImmunoglobulinD-binding protein) (IGD-binding protein)
(SP:Q06282) {Haemophilus influenzae}
Length = 753
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 994 CLFQMTLDALGVCLPDDREGNARLMASI 1021
C QMT D +G+CL D R NA ++S+
Sbjct: 76 CNLQMTKDGVGLCLSDIRLDNATTISSV 103
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 30.7 bits (66), Expect = 6.6
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 285 LYYNPRPPSDHSTWSYRPPPPVITEQPKSSATHFVPYERSYPNTLDSLAEKVHSYYPP 342
+Y++P PP H + Y+ PPP + H P + VH Y PP
Sbjct: 361 VYHSPPPPKKH--YVYKSPPPPVKHYSPPPVYHSPPPPKEKYVYKSPPPPPVHHYSPP 416
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 285 LYYNPRPPSDHSTWSYRPPPPV--ITEQPKSSATHFVP 320
++YNP PP + +S P PPV P A H+ P
Sbjct: 764 VHYNPPPPPSPAHYSPPPSPPVYYYNSPPPPPAVHYSP 801
>At4g03090.1 68417.m00417 expressed protein
Length = 877
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
Query: 268 RSRLQLGALSPDSAALDLYYNPRPPSDHSTWSYRPPPPV----ITEQPKS 313
R+ Q G ++++ DL P P D +TW +P P+ +TE PK+
Sbjct: 727 RANKQTGPAHDNNSSGDL---PESPGDENTWQQKPSTPIKDQTVTETPKT 773
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 276 LSPDSAALDLYYNPRPPSDHSTWSYRPPPPVITEQPKSSAT 316
L+ SA++ Y P PS S+ S RP P T S+T
Sbjct: 180 LNTSSASVSSYIRPSSPSSRSSSSARPSTPTRTSSASRSST 220
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 289 PRPPSDHSTWSYR--PPPPVITEQPKSSATHFVP----YERSYPNTLDSLAEKVHSYYPP 342
P PPS + S+R PPPP P A P YE S P ++ V +Y PP
Sbjct: 471 PPPPSSKMSPSFRATPPPPSSKMSPSVKAYPPPPPPPEYEPSPPPPSSEMSPSVRAYPPP 530
>At1g49270.1 68414.m05524 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 699
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 288 NPRPPSDHSTWSYRPPPPVITEQPKSS 314
+P PPSD S+ S PPPP T P+ S
Sbjct: 79 SPPPPSDSSSQSQSPPPP-STSPPQQS 104
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,239,547
Number of Sequences: 28952
Number of extensions: 974472
Number of successful extensions: 2848
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2756
Number of HSP's gapped (non-prelim): 117
length of query: 1292
length of database: 12,070,560
effective HSP length: 90
effective length of query: 1202
effective length of database: 9,464,880
effective search space: 11376785760
effective search space used: 11376785760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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