Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000454-TA|BGIBMGA000454-PA|IPR001478|PDZ/DHR/GLGF,
IPR000008|C2 calcium-dependent membrane targeting, IPR000198|RhoGAP,
IPR008936|Rho GTPase activation protein, IPR008973|C2
calcium/lipid-binding region, CaLB
(1292 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0332 + 2483743-2484131,2486062-2486182,2486307-2486426,248... 48 4e-05
12_01_0356 - 2707820-2708395,2708475-2708705,2709071-2709190,270... 45 3e-04
07_03_0413 + 17854787-17854847,17855362-17855606,17856127-178561... 44 6e-04
01_07_0307 + 42647006-42647202,42647287-42647866 44 8e-04
01_06_0161 + 27108920-27109279,27109479-27109598,27110301-271104... 43 0.001
02_05_0309 + 27762613-27763070,27763940-27764060,27764168-277642... 43 0.002
04_04_0883 + 29079315-29079715,29080918-29081038,29081127-290812... 42 0.002
07_03_0032 - 12651989-12652636,12652726-12652956,12653515-126536... 42 0.004
03_06_0643 + 35248597-35250585,35250663-35250773,35250867-352509... 39 0.030
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379... 38 0.040
02_03_0065 - 14629676-14629804,14631119-14631247,14631383-146317... 37 0.12
12_02_1174 - 26696869-26698191 34 0.65
12_02_0615 + 21242819-21243201,21244510-21244630,21244728-212448... 34 0.65
02_05_1007 + 33452774-33452993,33453028-33453122,33453208-334533... 34 0.65
12_01_0484 + 3840020-3840152,3840261-3840390,3840467-3841004 33 2.0
02_01_0302 - 2021221-2023305 33 2.0
07_03_1713 + 28939446-28939574,28939674-28940231,28940338-289404... 32 3.5
06_03_1310 + 29238644-29240260 31 6.0
06_01_0008 + 141405-142421 31 6.0
>11_01_0332 + 2483743-2484131,2486062-2486182,2486307-2486426,
2486897-2487127,2487205-2487783
Length = 479
Score = 48.4 bits (110), Expect = 4e-05
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 18/213 (8%)
Query: 878 PHELFRRRPTQGRVSPPPLFGSELEAVVAREIRPPNAPPVPLXXXXXXXXXXXXGLDIIG 937
P EL P + + +FG E++ N+ P L GL G
Sbjct: 115 PVELEPEVPRRAPSASASVFGVSTESMQCSYDSRGNSVPTILLMMQRRLYEQG-GLRAEG 173
Query: 938 LYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLFSRCLFQ 997
++R+ S+ E F R+ + P+ + DI+ ++G++K + RELP S L
Sbjct: 174 IFRINAENSQ-----EEFVRDQLNSGIVPDGI-DIHCLSGLIKAWFRELP----SGVLDS 223
Query: 998 MTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNKMSPQHL 1057
+ + + C ++ A + +CLP A A L + ++ +A VV + NKM+ +++
Sbjct: 224 IPPEQVMQCQSEED------CARVAKCLPPAEAALLEWAVNLMADVVQEEQINKMNARNI 277
Query: 1058 AVALAPPLMLHSSPPGELDYQ-RPIHVLQCLLQ 1089
A+ AP + S P L Y + ++ L+ L+Q
Sbjct: 278 AMVFAPNMTQMSDPLTALMYAVQVMNFLKMLIQ 310
>12_01_0356 - 2707820-2708395,2708475-2708705,2709071-2709190,
2709281-2709401,2711588-2712027
Length = 495
Score = 45.2 bits (102), Expect = 3e-04
Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLF 991
GL G++R+ S++ ++R+ + PE + D++ + G++K + RELP
Sbjct: 185 GLRAEGIFRINAENSQEELVRDQLNGG-----IVPEGI-DVHCLAGLIKAWFRELP---- 234
Query: 992 SRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNK 1051
S L + + + C ++ A + +CLP A L + ++ +A VV + NK
Sbjct: 235 SGVLDSIPPEQVMQCQSEED------CARVAKCLPPTEAALLDWAVNLMADVVQEEQINK 288
Query: 1052 MSPQHLAVALAPPLMLHSSPPGELDYQ-RPIHVLQCLLQ 1089
M+ +++A+ AP + + P L Y + ++ L+ L+Q
Sbjct: 289 MNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKMLIQ 327
>07_03_0413 + 17854787-17854847,17855362-17855606,17856127-17856189,
17856276-17856294,17856547-17856645,17856725-17856802,
17856891-17857135,17857796-17857952,17858161-17858303
Length = 369
Score = 44.4 bits (100), Expect = 6e-04
Identities = 54/187 (28%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 888 QGRVSPPPLFGSELEAVVAREIRPPNAPPVPLXXXXXXXXXXXXGLDIIGLYRLCGAASK 947
Q V+ +FG +EA V RE + VPL GL L++ G +
Sbjct: 122 QKGVASTDVFGVPIEATVQRE---QSGKAVPLVLVRCADYLVISGLSNEYLFKSEG---E 175
Query: 948 KRVLREGFER-NARTVELTPEAVPDINVITGVLKDYLRELPQPLFSRCLFQMTLDALGVC 1006
K+VL++ N + P+ V I+V ++K YL +P+PL + L+ DA V
Sbjct: 176 KKVLQQLVSLYNEDSGAPFPDGVNPIDV-AALIKCYLASIPEPLTTFSLYDELRDAR-VS 233
Query: 1007 LPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNKMSPQHLAVALAPPLM 1066
+ D R +I++ LP TL F+ L V NKM + LAV AP +M
Sbjct: 234 IADLR--------NILKKLPNVNYMTLEFVTALLLRVSRKSSLNKMDSRSLAVEFAPLIM 285
Query: 1067 LHSSPPG 1073
G
Sbjct: 286 WQQGDSG 292
>01_07_0307 + 42647006-42647202,42647287-42647866
Length = 258
Score = 44.0 bits (99), Expect = 8e-04
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 17/159 (10%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLF 991
GL G++R+ ++++ +RE + PE D++ + G++K + RELP +
Sbjct: 104 GLKAEGIFRIAADDAQEQAVREQLNSG-----VLPEGGVDVHCLAGLIKAWFRELPGGML 158
Query: 992 SRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNK 1051
+L A V + ARL A LP A A L + + +A V + NK
Sbjct: 159 D------SLPAAEVTRCQSADDCARLCAR----LPAAKAALLDWAVQLMADVAREERSNK 208
Query: 1052 MSPQHLAVALAPPLMLHSSPPGELDYQRPIHVLQCLLQI 1090
M +++A+ AP M H+ P + +HV+ L +
Sbjct: 209 MGSRNVAMVFAPN-MTHAMDPFTA-LKHAVHVMNFLTML 245
>01_06_0161 +
27108920-27109279,27109479-27109598,27110301-27110438,
27110680-27110784,27110883-27111051,27111507-27111583,
27111796-27111840,27111984-27112022,27112374-27112457,
27112846-27112884,27112963-27113025,27113109-27113238,
27113319-27113374
Length = 474
Score = 43.2 bits (97), Expect = 0.001
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 123 LGLYIREGDGGTRTDGVFISRIALESAVYNSGCLKVGDEILAVNLVDVRRMSLDDVVIIM 182
+GL +RE G + + + + L+ +++G ++ GDE+L+VN +DV S DV ++
Sbjct: 172 IGLNLREIPDGNGSSKLMVLGLILDGPAHSAG-VRQGDELLSVNGIDVMGKSAFDVSSML 230
Query: 183 SIPRRLLLCTRQRKGKSGPGSP 204
P+ + + + G GP P
Sbjct: 231 QGPKDTFVTIKVKHGNCGPVEP 252
>02_05_0309 + 27762613-27763070,27763940-27764060,27764168-27764287,
27764633-27764863,27764964-27765503
Length = 489
Score = 42.7 bits (96), Expect = 0.002
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 16/140 (11%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLF 991
GL G++R+ S++ +RE + P+ V D++ +TG++K + RELP
Sbjct: 191 GLQAEGIFRINADNSQELHVREQLNMG-----VVPDGV-DMHCLTGLIKAWFRELP---- 240
Query: 992 SRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNK 1051
S L +T + + C + E L+AS LP A L + ++ +A VV ++ NK
Sbjct: 241 SGVLDSLTPEQVMHC---NTEEECALLAST---LPPVEAALLDWAINLMADVVEHENYNK 294
Query: 1052 MSPQHLAVALAPPLMLHSSP 1071
M+ +++A+ AP + + P
Sbjct: 295 MNARNIAMVFAPNMTQMADP 314
>04_04_0883 + 29079315-29079715,29080918-29081038,29081127-29081246,
29081646-29081876,29081951-29082517
Length = 479
Score = 42.3 bits (95), Expect = 0.002
Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 16/140 (11%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLF 991
GL I G++R+ S++ +R+ + N+ V P+ V D++ + G++K + RELP +
Sbjct: 172 GLKIEGIFRINAENSQEICVRK--QLNSGVV---PDEV-DLHCLAGLIKAWFRELPTGV- 224
Query: 992 SRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNK 1051
L +T + + C + E + L+AS+ LP A L + ++ +A VV ++ NK
Sbjct: 225 ---LDSLTPEQVMHC---NTEEDCALLASM---LPPVEAALLDWAINLMADVVEHENYNK 275
Query: 1052 MSPQHLAVALAPPLMLHSSP 1071
M+ +++A+ AP + + P
Sbjct: 276 MNARNIAMVFAPNMTQMADP 295
>07_03_0032 - 12651989-12652636,12652726-12652956,12653515-12653634,
12653768-12653891,12654023-12654366
Length = 488
Score = 41.5 bits (93), Expect = 0.004
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 937 GLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLFSRCLF 996
G++R+ S++ +RE R L P+ + D++ + ++K + RELP+ +
Sbjct: 159 GIFRITPENSQEENVREQLNRG-----LVPDDI-DVHCLASLIKAWFRELPEGVLDSLSP 212
Query: 997 QMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNKMSPQH 1056
+ L C ++ +V LP A L ++++ +A VV ++ NKM+ ++
Sbjct: 213 EQVLH----CNTEEE------CVELVRLLPPTQAALLNWVVEFMADVVEEEESNKMNARN 262
Query: 1057 LAVALAPPLMLHSSP 1071
+A+ AP + S P
Sbjct: 263 VAMVFAPNMTQMSDP 277
>03_06_0643 +
35248597-35250585,35250663-35250773,35250867-35250971,
35252215-35252304
Length = 764
Score = 38.7 bits (86), Expect = 0.030
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 851 VARSAMHQLAIKLEPRGTLYVRIRHTEPHELFRRRPTQGRVSP 893
V S H +L P T+ V IRHTE F R+ TQGR SP
Sbjct: 716 VQSSHPHHYGNQLHPSNTMQVFIRHTEGKNSFSRKQTQGRHSP 758
>05_04_0206 +
19034259-19035462,19036870-19037045,19037752-19037975,
19038133-19038914,19039337-19039494
Length = 847
Score = 38.3 bits (85), Expect = 0.040
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Query: 244 QHGTLRSTGGHGNAVRPVGDGREERSRLQLGA------LSPDSAALDLYYNPRPPSDHST 297
Q T + G G RPVG G RL G +SP SAA+D P PP
Sbjct: 69 QPTTTTAAGAAGEEARPVGGGATAADRLAAGGGMGVPGVSPTSAAVDAMMMPPPPPID-- 126
Query: 298 WSYRPPPPVITEQPKSSA 315
+ PPPP + E S A
Sbjct: 127 -TLPPPPPPLPEFSPSPA 143
>02_03_0065 -
14629676-14629804,14631119-14631247,14631383-14631736,
14631817-14632063,14632155-14632231,14632574-14632648,
14632721-14632822,14632966-14633084,14633538-14633627,
14634866-14635022,14635085-14635098,14635425-14635548,
14635628-14635678,14635793-14635891,14636962-14637072
Length = 625
Score = 36.7 bits (81), Expect = 0.12
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 792 DRVHKARTVIRNSELDFDWDEAFDLELVD--NRQLDVLVYSWDPQHRHKLCYRGVITLPD 849
+++ +T ++ S L+ +W+E F L + D ++ L++ VY W+ +H VI L +
Sbjct: 379 EKLPSKKTSVKRSNLNPEWNEDFKLVVKDPESQALELTVYDWEQVGKHDKIGMSVIPLKE 438
Query: 850 LVARSA 855
L+ A
Sbjct: 439 LIPDEA 444
>12_02_1174 - 26696869-26698191
Length = 440
Score = 34.3 bits (75), Expect = 0.65
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 288 NPRPPSDHSTWSYRPPPPVITEQPKSSATHFVPYERSYPNTLDSLAEKVHSYYP-PESGS 346
+P PP + Y PPP IT +P A P S P+T DS + + P G
Sbjct: 300 SPPPPPQQPSQRYWTPPPAITPEPAKPAAG-KPTSSSPPSTKDSPRPPLPAPSPAANGGD 358
Query: 347 TRFGGRVPRSGSEQQLPRAETHS-DFGR 373
R P S +++ + E + + GR
Sbjct: 359 PRLPATTPLSKQKRKEEKREKEAQEMGR 386
>12_02_0615 + 21242819-21243201,21244510-21244630,21244728-21244847,
21245015-21245245,21245365-21245862
Length = 450
Score = 34.3 bits (75), Expect = 0.65
Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLF 991
GL G++R+ ++ +R+ + + PE + D++ + ++K + RELP+ +
Sbjct: 166 GLKAEGIFRINPENDQEEHVRDQLNKG-----VVPEDI-DVHCLASLIKAWFRELPEGVL 219
Query: 992 SRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNK 1051
+ L + EG +V L A L + ++ +A VV ++ NK
Sbjct: 220 DSLSPEQVLQC-------NSEGE---FLELVTLLRPTQAALLNWAVELMADVVEEEELNK 269
Query: 1052 MSPQHLAVALAPPLMLHSSP 1071
M+ +++A+ AP + S P
Sbjct: 270 MNARNIAMVFAPNMTQMSDP 289
>02_05_1007 +
33452774-33452993,33453028-33453122,33453208-33453329,
33453392-33453694,33454657-33454918,33455039-33455140,
33455931-33457151,33457250-33457342
Length = 805
Score = 34.3 bits (75), Expect = 0.65
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 10/135 (7%)
Query: 247 TLRSTGGHGNAVRPVGDGREERSRLQLGALSPDSAALDLYYNPRPPSDHSTWSYRPPPPV 306
++ T + V V G + S Q +P + L P + ST + PPPP
Sbjct: 169 SISKTAPDFSTVYVVSKGGKVTSVRQAVRQAPAVSPLRTMIQGPKPDNVSTQKWTPPPPP 228
Query: 307 ITEQPKSSAT-----HFV--PYERSYPNTLDSLAEKVHSYYPPESGSTRFGGRVPRSGSE 359
T +P + T +F+ P+ R NT S+ + Y PES F PR +
Sbjct: 229 STTRPDIAGTPKIQDNFIMSPFARG-ANT--SVRKAFPDYSMPESSDISFISSGPRRSLD 285
Query: 360 QQLPRAETHSDFGRH 374
PR + SD H
Sbjct: 286 LYPPRLSSGSDAHDH 300
>12_01_0484 + 3840020-3840152,3840261-3840390,3840467-3841004
Length = 266
Score = 32.7 bits (71), Expect = 2.0
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 283 LDLYYNPRPPSDHSTWSYRPPPPVITEQPKSSATHFVPYERSYPNTLDSL 332
+DL + PPS S S PPPP E ++ AT Y Y T + +
Sbjct: 169 IDLNLSISPPSSSSQPSSPPPPPHEAEARRAGATASYTYHHHYSETREKI 218
>02_01_0302 - 2021221-2023305
Length = 694
Score = 32.7 bits (71), Expect = 2.0
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 278 PDSAALDLYYNPRPPSDHSTWSYRPPPPVITEQPKSSATHFVPYERSYPN 327
P S+ Y++P P H+T S+ PP T P S P SYP+
Sbjct: 498 PSSSTTPSYHSP--PQGHTTPSHPSPPSSSTAPPSHSPPQSTPTHPSYPS 545
>07_03_1713 +
28939446-28939574,28939674-28940231,28940338-28940460,
28940676-28940912
Length = 348
Score = 31.9 bits (69), Expect = 3.5
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 287 YNPRPPSDHSTWSYRPPPPVITEQPKSSATHFVPYERSY-PNTLDSLAEKVHSYYPPESG 345
Y P PP + +Y PPPP +P + P Y P S E + Y PP G
Sbjct: 124 YAPPPPPAYGHQAYPPPPP--NREPGHG---YHPAPAFYPPQPPPSHDEPGYGYRPPPVG 178
Query: 346 --STRFGGRVPRSGSEQQLPRAETHSD 370
+G R+PR+ + + R +D
Sbjct: 179 PPGAGYGNRLPRALASEPTVRILCRAD 205
>06_03_1310 + 29238644-29240260
Length = 538
Score = 31.1 bits (67), Expect = 6.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 289 PRPPSDHSTWSYRPPPPVITEQPKSS 314
P PPS + PPPP +E PKSS
Sbjct: 398 PPPPSSPTPSHLPPPPPTYSESPKSS 423
>06_01_0008 + 141405-142421
Length = 338
Score = 31.1 bits (67), Expect = 6.0
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 678 VRQLLELGSRFTCPNPSPVPTPGSRHQRPLDINPSDFLKYKVDKMTGGG 726
+R +L + F P+PSP P+P +RH +PS+FL + GG
Sbjct: 76 LRNPSDLAAFFGPPSPSPSPSPAARH-----FDPSNFLHDHFTGLLSGG 119
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,786,389
Number of Sequences: 37544
Number of extensions: 1359655
Number of successful extensions: 4223
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4188
Number of HSP's gapped (non-prelim): 37
length of query: 1292
length of database: 14,793,348
effective HSP length: 91
effective length of query: 1201
effective length of database: 11,376,844
effective search space: 13663589644
effective search space used: 13663589644
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)
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