Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000454-TA|BGIBMGA000454-PA|IPR001478|PDZ/DHR/GLGF,
IPR000008|C2 calcium-dependent membrane targeting, IPR000198|RhoGAP,
IPR008936|Rho GTPase activation protein, IPR008973|C2
calcium/lipid-binding region, CaLB
(1292 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0) 149 1e-35
SB_718| Best HMM Match : RhoGAP (HMM E-Value=0) 94 8e-19
SB_43445| Best HMM Match : PDZ (HMM E-Value=8.9e-07) 88 5e-17
SB_19750| Best HMM Match : RhoGAP (HMM E-Value=8.4e-34) 73 1e-12
SB_4894| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-12
SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0) 65 4e-10
SB_48764| Best HMM Match : RhoGAP (HMM E-Value=0) 64 7e-10
SB_42552| Best HMM Match : RhoGAP (HMM E-Value=0) 62 4e-09
SB_12981| Best HMM Match : RhoGAP (HMM E-Value=0) 56 1e-07
SB_42987| Best HMM Match : RhoGAP (HMM E-Value=2.7e-26) 55 4e-07
SB_43333| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 5e-06
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 9e-06
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-05
SB_16463| Best HMM Match : RhoGAP (HMM E-Value=5.7e-25) 50 2e-05
SB_38980| Best HMM Match : RhoGAP (HMM E-Value=0) 47 9e-05
SB_45475| Best HMM Match : RhoGAP (HMM E-Value=1.26117e-44) 47 9e-05
SB_21416| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-04
SB_11360| Best HMM Match : PDZ (HMM E-Value=0) 46 2e-04
SB_19709| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-04
SB_7782| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-04
SB_40773| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-04
SB_31303| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 0.001
SB_44674| Best HMM Match : PDZ (HMM E-Value=1.8e-05) 42 0.003
SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.004
SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.006
SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33) 40 0.010
SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18) 40 0.010
SB_26957| Best HMM Match : PDZ (HMM E-Value=0) 40 0.010
SB_42550| Best HMM Match : RhoGAP (HMM E-Value=0) 40 0.017
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.023
SB_33452| Best HMM Match : PDZ (HMM E-Value=1.2e-11) 39 0.023
SB_637| Best HMM Match : HR1 (HMM E-Value=2.7e-18) 39 0.030
SB_48713| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.053
SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.12
SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.16
SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17) 36 0.28
SB_56237| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.49
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.49
SB_1013| Best HMM Match : Peptidase_M1 (HMM E-Value=0.041) 34 0.65
SB_3725| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.5
SB_34699| Best HMM Match : Peptidase_S8 (HMM E-Value=1.5e-07) 33 2.0
SB_43064| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.6
SB_16171| Best HMM Match : PLAT (HMM E-Value=8e-22) 32 2.6
SB_664| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.6
SB_3985| Best HMM Match : C2 (HMM E-Value=0) 32 3.5
SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.6
SB_7446| Best HMM Match : SH2 (HMM E-Value=2.7e-22) 31 4.6
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 31 4.6
SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.6
SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 8.0
SB_30603| Best HMM Match : PKD_channel (HMM E-Value=1.2e-15) 31 8.0
SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40) 31 8.0
>SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1277
Score = 149 bits (361), Expect = 1e-35
Identities = 98/288 (34%), Positives = 149/288 (51%), Gaps = 12/288 (4%)
Query: 786 YCVLECDRVHKARTVIRNSELDFDWDEAFDLELVDNRQLDVLVYSWDPQHRHKLCYRGVI 845
YC +E KA T + S WDE F++E+ R++ L S + K R
Sbjct: 822 YCAIEVGFERKAFTSFKKSSNKITWDEDFEVEIQHGREM-CLACSTSNREFDKPVARTSF 880
Query: 846 TLPDLVARSAMHQLAIKLEPRGTLYVRIRHTEPHELFRRRPTQGRVSPPPLFGSELEAVV 905
L LV HQ+ KL+P G ++V + TE L +R + + +FG L V
Sbjct: 881 YLAPLVRCGQSHQIIFKLQPSGFVHVELEFTELKTLLKRVQSSKKSG---VFGFRLN--V 935
Query: 906 AREIRPPNAPPVPLXXXXXXXXXXXXGLDIIGLYRLCGAASKKRVLREGFERNARTVELT 965
E+ + VPL GL+ +GLYR+ G A +K+ LR F+ N+ V+++
Sbjct: 936 TSELEQSS---VPLLVRKCVLEIEKRGLESVGLYRISGNARRKKELRGFFDENSEAVDIS 992
Query: 966 PEAVPDINVITGVLKDYLRELPQPLFSRCLFQMTLDALGVCLPDDREGNAR-LMASIVEC 1024
E PDINVITG+LKDYLRELP+PL + + + A + D + R +M+ ++
Sbjct: 993 EENCPDINVITGILKDYLRELPEPLITEKMTEGLRKAAKNEIQDKKVDERRQVMSELLSG 1052
Query: 1025 LPRAARATLVFLLDHLALVVAAQDRNKMSPQHLAVALAPPLMLHSSPP 1072
LP R TLVF+L+HL V+ ++ NKM ++L+V LAP ++ +PP
Sbjct: 1053 LPDPNRHTLVFILNHLRHVMEKKEFNKMDARNLSVCLAP--VMQCAPP 1098
Score = 80.6 bits (190), Expect = 8e-15
Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 113 VEIVKRPGQTLGLYIREGDGGTRTDGVFISRIALESAVYNSGCLKVGDEILAVNLVDVRR 172
VEI + Q LG +IR+GDG R DGVF+SRI S V G L VGDEIL VN V +
Sbjct: 114 VEIKRTHNQPLGFFIRQGDGWGRKDGVFVSRITPGSLVDCDGSLAVGDEILEVNGVCLAG 173
Query: 173 MSLDDVVIIMSIPRRLLLCTRQRKGKSGPGSPSLPRSEHKPPPVV 217
+ DVV ++ IP+RL+L T ++ K P + + +H P ++
Sbjct: 174 FRVHDVVHLIQIPKRLIL-TINKEAKVKRSQPKISQRQHSAPDLL 217
>SB_718| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 598
Score = 93.9 bits (223), Expect = 8e-19
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 20/292 (6%)
Query: 785 LYCVLECDR----VHKARTVIRNSELDFDWDEAFDLELVDNRQLDVLVYSWDPQHRHKLC 840
LYC LE D V KART I + D WD+ E +D + +D +
Sbjct: 217 LYCTLEVDHFGQFVKKARTKIAKTTGDPVWDQGTGGETLDTCPFINMSQDFDLEVEGTKE 276
Query: 841 YRGVITLPDLVARSAMHQLAIKLEPRGTLYVRIRHTEPHELFRRRPTQGRVSPPPLFGSE 900
R + + + +G + + +++++ + R+ + V +FG +
Sbjct: 277 LRIHVYCKSRYTLQRDEECGLG-RIQGAITLSLQYSKTRQGIERKKSVNSVG---VFGVD 332
Query: 901 LEAVVAREIRPPNAPPVPLXXXXXXXXXXXXGLDIIGLYRLCGAASKKRVLREGFERNAR 960
+E V +RE + +PL GL+ +G+YRL GA+S + L+EGF+ N++
Sbjct: 333 IETVTSRE-----SCDIPLIVIGCVREIEKRGLEEVGIYRLSGASSDVKRLKEGFDENSQ 387
Query: 961 T-VELTPEAVPDINVITGVLKDYLRELPQPLFSRCLFQMTLDALGVCLPDDREGNARLMA 1019
+ + L EA DI+ + G+ K YLR+LP+PLF+ L+ + A + D E M
Sbjct: 388 SALVLVSEA--DIHAVAGLFKMYLRDLPEPLFTDELYDKFVKAYAMA---DAEEKRETML 442
Query: 1020 SIVECLPRAARATLVFLLDHLALVVAAQDRNKMSPQHLAVALAPPLMLHSSP 1071
+ LP R T +L HL V + +KM +L+ P +L SP
Sbjct: 443 ELFRSLPTPNRLTACYLFQHLRKVAEKSEVHKMGLNNLSTVFGPN-VLRPSP 493
>SB_43445| Best HMM Match : PDZ (HMM E-Value=8.9e-07)
Length = 373
Score = 87.8 bits (208), Expect = 5e-17
Identities = 52/153 (33%), Positives = 88/153 (57%), Gaps = 5/153 (3%)
Query: 42 RKVSGVSNEIFRQIEMVENDHDSTT---AAALEAVERRGEMIVRI-LELRQVGRNNIEAA 97
R+ S VS E F ++ + E + D A + + + + + ++L +I
Sbjct: 38 RRFSSVSQEDFEKMRLAEKEDDFFAIRKATDITDPDTKSDPCPPLPIKLIHGTFRHILGV 97
Query: 98 KKFFALQDTRHVVQLVEIVKRPGQTLGLYIREGDGGTRTDGVFISRIALESAVYNSGCLK 157
++ + Q T + + +E+ ++PG++LG YIR+GDG R DG+F+SR+ L + V L+
Sbjct: 98 REACSKQGT-FLQRTIELKRKPGESLGFYIRQGDGWEREDGIFVSRVVLGTDVDVFELLR 156
Query: 158 VGDEILAVNLVDVRRMSLDDVVIIMSIPRRLLL 190
VGDEI+ VN VDVR M ++DV +M + RRL+L
Sbjct: 157 VGDEIVKVNKVDVRTMGIEDVSALMQMTRRLIL 189
>SB_19750| Best HMM Match : RhoGAP (HMM E-Value=8.4e-34)
Length = 128
Score = 73.3 bits (172), Expect = 1e-12
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 6/125 (4%)
Query: 917 VPLXXXXXXXXXXXXGLDIIGLYRLCGAASKKRVLREGFERNART-VELTPEAVPDINVI 975
+PL GL+ +G+YRL GA+S + L+EGF+ N+++ + L EA DI+ +
Sbjct: 7 IPLIVIGCVREIEKRGLEEVGIYRLSGASSDVKRLKEGFDENSQSALVLVSEA--DIHAV 64
Query: 976 TGVLKDYLRELPQPLFSRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVF 1035
G+ K YLR+LP+PLF+ L+ + A + D E M + + LP R T +
Sbjct: 65 AGLFKMYLRDLPEPLFTDELYDKFVKAYAMA---DAEEKRETMLELFQSLPTPNRLTACY 121
Query: 1036 LLDHL 1040
L HL
Sbjct: 122 LFQHL 126
>SB_4894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 72.1 bits (169), Expect = 3e-12
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 883 RRRPTQGRVSPPP---LFGSELEAVVAREIRPPNAPPVPLXXXXXXXXXXXXGLDIIGLY 939
+++ ++ SPPP +FG LE V + I P +P GL++ G+Y
Sbjct: 82 KKKKSETPSSPPPKKPIFGIPLEKAVKQSILPDGVE-LPRLFREGIMYVEENGLNVEGIY 140
Query: 940 RLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLFSRCLFQMT 999
R+ G SK L+E +++ + V+L E P+ V+ ++K YLRELP+ + + L
Sbjct: 141 RVSGVKSKVDALKELYDQG-KQVDLK-EYEPE--VVASIVKQYLRELPESVLTMMLAPRF 196
Query: 1000 LDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNKMSPQHLAV 1059
+ +G+ D++ ++ LP R L + + H+ V+ NKMS Q++++
Sbjct: 197 NELIGI---QDKKEQLEKTKQLLAELPSPNRTLLAWTMVHMGHVIDKASENKMSLQNISI 253
Query: 1060 ALAPPLML 1067
L P + +
Sbjct: 254 VLNPTMSI 261
>SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1250
Score = 64.9 bits (151), Expect = 4e-10
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 23/154 (14%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLF 991
GL + G+YR+ G S+ L + FE A V+L+ VP +VI VLK YLR+LP+PL
Sbjct: 277 GLHVKGIYRVSGVKSRVEKLCQAFENGAELVDLS--TVPP-HVIAAVLKLYLRQLPEPLL 333
Query: 992 SRCLFQ----------MTLDALGVCLPDDREGNAR---------LMASIVECLPRAARAT 1032
+ L+ T+D L C ++ + R L ++V+ LP+A T
Sbjct: 334 TFKLYPEFIKLAKESFNTIDNLTSCKNASQDESIRQDYVELVQKLRHAVVK-LPKANFKT 392
Query: 1033 LVFLLDHLALVVAAQDRNKMSPQHLAVALAPPLM 1066
+++HL LV A +D N MS +L + P L+
Sbjct: 393 AAKIIEHLHLVAANEDENSMSGSNLGIVFGPTLL 426
>SB_48764| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 583
Score = 64.1 bits (149), Expect = 7e-10
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 11/171 (6%)
Query: 897 FGSELEAVVAREIRPPNAPPVPLXXXXXXXXXXXXGLDIIGLYRLCGAASKKRVLREGFE 956
FGS+L +A R +PL G+ + G+YRL G++S + LR F+
Sbjct: 5 FGSDLGEHLAVTCRQ-----IPLVLEKCAAVIEEHGI-VDGIYRLSGSSSIIQKLRFLFD 58
Query: 957 RNARTVELTPEA-VPDINVITGVLKDYLRELPQPLFSRCLFQMTLDALGVCLPDDREGNA 1015
+ EL E + D++ I+ +LK Y RELP PL + L+ + A+ + D++E
Sbjct: 59 GD-EPPELDDEYYLRDVHCISSLLKMYFRELPNPLLTYSLYDKFVSAIQI--TDEKERKV 115
Query: 1016 RLMASIVECLPRAARATLVFLLDHLALVVAAQDRNKMSPQHLAVALAPPLM 1066
+ +V+ LP TL +LL HLA V + + M ++LA+ AP L+
Sbjct: 116 AI-HHVVQQLPPPHYRTLEYLLQHLAKVASHAGQTAMHAKNLAIVWAPNLL 165
>SB_42552| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 945
Score = 61.7 bits (143), Expect = 4e-09
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 18/177 (10%)
Query: 912 PNAPPVPLXXXXXXXXXXXXGLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPD 971
P +P VP GL ++G++R G+ + + +RE F+ +T + E P
Sbjct: 401 PASPQVPTIVNQAIEHLENYGLHVLGIFRTGGSKKRMKQMREQFDSGEKT-QFNAEDNP- 458
Query: 972 INVITGVLKDYLRELPQPLFSRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARA 1031
+ + + K+YLR+LP+PL +R L+ L+ G+ D + + LP A R
Sbjct: 459 -HDVAALFKEYLRDLPEPLLTRELYSAFLETQGI---SDTAKEIEALQLLCCLLPAANRD 514
Query: 1032 TLVFLLDHLALV-VAAQDR----------NKMSPQHLAVALAPPLMLHSSPPGELDY 1077
TL LL L+ V A+D+ NKM+ ++LA + P + LH G Y
Sbjct: 515 TLNALLAFLSKVDFYAEDKIDDMGCDIPGNKMNSKNLATLIGPNI-LHKVKSGSNGY 570
>SB_12981| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 251
Score = 56.4 bits (130), Expect = 1e-07
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 19/205 (9%)
Query: 880 ELFRRRPTQGRVSPPPLFGSELEAVVAREIRPPNAPPVPLXXXXXXXXXXXXGLDIIGLY 939
+L RRPT + + ++ + +P+ GL+ G+Y
Sbjct: 16 KLISRRPTIEELEKKGIIREQVFGCPITHLCEREGTTIPIFVSKCINAIESRGLEFDGIY 75
Query: 940 RLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPL-----FSRC 994
R+CG + + +R ++ + L D++ + G LK Y RE+P+PL FS
Sbjct: 76 RVCGNVALVQRIRIMVDQE-EPIALGESPFDDVHALAGSLKLYFREMPEPLVPFDFFSGF 134
Query: 995 LFQMTLDALGV-CLP----------DDREGNARL--MASIVECLPRAARATLVFLLDHLA 1041
+ + + G+ LP + N++L + S+V LPR TL LL HL
Sbjct: 135 VEAIIFELSGLNGLPNRYRFYRLSSEQSTRNSKLGALKSLVGQLPRINFDTLKLLLGHLH 194
Query: 1042 LVVAAQDRNKMSPQHLAVALAPPLM 1066
V+ + N+M Q+LA+ P +M
Sbjct: 195 KVMGFSEVNRMHAQNLAIVWGPNMM 219
>SB_42987| Best HMM Match : RhoGAP (HMM E-Value=2.7e-26)
Length = 139
Score = 54.8 bits (126), Expect = 4e-07
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 971 DINVITGVLKDYLRELPQPLFSRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAAR 1030
DIN ITGV K Y R+LP PL + F+ + D+ ++ + LP+A
Sbjct: 12 DINTITGVCKLYFRQLPLPLIT---FETYSKFIAAAKTQDKHLRIEELSKALGELPQAHY 68
Query: 1031 ATLVFLLDHLALVVAAQDRNKMSPQHLAVALAPPLMLHSSPPGE 1074
T+ FL+ HL V + +N M+ ++L++ P LM +P G+
Sbjct: 69 ETMKFLMGHLHRVSQRRSKNMMTEENLSIVFGPTLM--RAPEGD 110
>SB_43333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 51.2 bits (117), Expect = 5e-06
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 6/176 (3%)
Query: 913 NAPPVPLXXXXXXXXXXXXGLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDI 972
N +P GLD+ G++R + + + F + V+ T + D+
Sbjct: 267 NGEVIPRAIRTSVEFIQENGLDVEGIFRRSANSQMVKQVTVMFNQGT-PVDYTE--LGDV 323
Query: 973 NVITGVLKDYLRELPQPLFSRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARAT 1032
+ ++K +LRELP+PL + L + + V L D + +++ LP A
Sbjct: 324 HCAAAIIKKFLRELPEPLLTYELCDVINEI--VALGDRDKKLMETWSALHNRLPAENFAL 381
Query: 1033 LVFLLDHLALVVAAQDRNKMSPQHLAVALAPPLMLHSSPPGELDYQRPIHVLQCLL 1088
L F+++ L V NKM+ +LA+ P L+ + LD I+ CL+
Sbjct: 382 LKFIMEFLQ-EVQQHPANKMTASNLAIVFGPNLIWGRTAASSLDAMAQINTFTCLV 436
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 50.4 bits (115), Expect = 9e-06
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 110 VQLVEIVKRPGQTLGLYIREGDGGTRTD-GVFISRIALESAVYNSGCLKVGDEILAVNLV 168
+Q++++ K PG+ LG I G+ R D G+F+ + S + G LK GD ILAVN
Sbjct: 966 IQVIKLRKEPGKGLGFTILGGENSQRLDLGIFVKSVTEGSVAFKDGRLKAGDRILAVNGT 1025
Query: 169 DVRRMSLDDVVI 180
+ ++S + V+
Sbjct: 1026 SLEQVSHEYAVM 1037
Score = 36.3 bits (80), Expect = 0.16
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 105 DTRHVVQLVEIVKRPGQTLGLYIREGDGGT-RTDGVFISRIALESAVYNSGCLKVGDEIL 163
+ R VV+L +I G +LGL + G T + G+++ + L +G +++GD IL
Sbjct: 1250 EMRFVVELEKI----GSSLGLSVSGGVNTTVKLGGIYVKSLMLNGPADRNGKIRIGDRIL 1305
Query: 164 AVNLVDVRRMSLDDVV-IIMSIPRRLLL 190
VN V + ++ V II P+R L
Sbjct: 1306 EVNGVSLVGVTHKQAVEIIKRAPQRCRL 1333
Score = 34.7 bits (76), Expect = 0.49
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 138 GVFISRIALESAVYNSGCLKVGDEILAVNLVDVRRMS 174
G+FI I+ S G L+VGD+IL VN DV+ MS
Sbjct: 1934 GIFIKTISPGSVAEEDGRLRVGDQILKVNGEDVQGMS 1970
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 49.6 bits (113), Expect = 2e-05
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 895 PLFGSELEAVVAREIRPPNAPPVPLXXXXXXXXXXXXGLDIIGLYRLCGAASKKRVLREG 954
P+FG EL A + RP ++ P P+ G+++ +Y + S K LR
Sbjct: 212 PVFGQEL----ATQFRP-SSKPAPVCVMKCIEAIEQRGMNVDSIYLISSQGSNKYSLRLA 266
Query: 955 FERNARTVELTPEAVPDINVITGVLKDYLRELPQPLFSRCLFQMTLDALGVCLPDDREGN 1014
F ++ V + E D + I VLK Y +ELP LF+ + T + +D GN
Sbjct: 267 FCQDPANVNMRDEEWNDPHCIATVLKMYFQELPTSLFTEEKYS-TFIQIFKTNENDSFGN 325
Query: 1015 ARLMASIVECLPRAARATLVFLLDHL 1040
+ + LP+ ++ + +L+ HL
Sbjct: 326 ---LLKEINSLPKEHKSVIEYLMKHL 348
>SB_16463| Best HMM Match : RhoGAP (HMM E-Value=5.7e-25)
Length = 252
Score = 49.6 bits (113), Expect = 2e-05
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 956 ERNARTVELTPEAVPDINVITGVLKDYLRELPQPLFSRCLFQMTLDALGVCLPDDREGNA 1015
E+ A + E D+N IT +LK +LR+LP+ L + L++ ++A P +R G
Sbjct: 23 EKGAENINFQEEKWHDVNNITSLLKQFLRKLPEGLVTAELYESFIEANRKDDPVERMGAL 82
Query: 1016 RLMASIVECLPRAARATLVFLLDHLALVVAAQDRNKMSPQHL 1057
++ ++ LP TL LL HL V D NKM + L
Sbjct: 83 KM---LINELPDHNYETLRHLLTHLKHVAEHADTNKMKKETL 121
>SB_38980| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 367
Score = 47.2 bits (107), Expect = 9e-05
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 13/169 (7%)
Query: 897 FGSELEAVVAREIRPPNAPPVPLXXXXXXXXXXXXGLDIIGLYRLCGAASKKRVLREGFE 956
FG LE V + + P+P GL G++R+ G L+ F+
Sbjct: 176 FGVPLEEVT----KSRDGSPIPWVLAKIVHYLSQCGLKHEGIFRVSGNHKVVESLKATFD 231
Query: 957 RNARTVELTPEAVPDINVITGVLKDYLRELPQPLFSRCLFQMTLDALGV--CLPDDREGN 1014
R+ + E D+ + G+LK +LRELP+P + L T D + V DD
Sbjct: 232 RDG---DADLEEC-DVMAVAGLLKLFLRELPEPPVPQAL---TTDFIKVHEVYGDDNPDC 284
Query: 1015 ARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNKMSPQHLAVALAP 1063
+ ++++ LP L FL L V ++ NKMS LA+ P
Sbjct: 285 LDELRALLDKLPYLNYELLKFLCHFLVEVSMNEENNKMSTMALAIVFGP 333
>SB_45475| Best HMM Match : RhoGAP (HMM E-Value=1.26117e-44)
Length = 552
Score = 47.2 bits (107), Expect = 9e-05
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 937 GLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLFSRCLF 996
GL+R G+ ++++L+E E P V G++K + R+L +PL +
Sbjct: 212 GLFRKSGSVQRQKLLKERIELGEEISTAQPHDV------AGLMKQFFRQLQEPLLTNTYH 265
Query: 997 QMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNKMSPQH 1056
+ + + +D + M I LP A L + + LA + +++KM +
Sbjct: 266 DSFIKTMRI---EDDNTRTKAMLYICLLLPLAHLQALKYTMKFLAEFASHSEKSKMGFSN 322
Query: 1057 LAVALAPPLM 1066
LA+ L P LM
Sbjct: 323 LAIVLTPNLM 332
>SB_21416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 46.4 bits (105), Expect = 2e-04
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 103 LQDTRHVVQLVEIVKRPGQTLGLYIREG-------DGGTRTDGVFISRIALESAVYNSGC 155
L +T V+L++ + LG YIR+G G R G+FISR+ ++G
Sbjct: 155 LPETHRRVRLLK--HNSDKPLGFYIRDGTSVRVTPSGLERVPGIFISRLVPGGLAESTGL 212
Query: 156 LKVGDEILAVNLVDVRRMSLDDVVIIMSIPRRLLLCT 192
L V DE+L VN +DV +LD V +M L+ T
Sbjct: 213 LAVNDEVLEVNGIDVSGKTLDQVTDMMIANSHNLIIT 249
>SB_11360| Best HMM Match : PDZ (HMM E-Value=0)
Length = 625
Score = 46.0 bits (104), Expect = 2e-04
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 114 EIVKRPGQT-LGLYIREGDGGTRT---DGVFISRIALESAVYNSGCLKVGDEILAVNLVD 169
EIV G LG I G G +G++I++I A G L+VGD+I++VNL +
Sbjct: 16 EIVLIKGSKGLGFSIAGGSGNQHVPGDNGIYITKIIEGGAAQQDGRLQVGDKIISVNLQN 75
Query: 170 VRRMSLDDVVIIMSIPRRLLLCTRQR-------KGKSGPGSPSLPRSEHKPPPVVVLK 220
+ +S +D V ++ + + R + S P P+LP+ PP V++
Sbjct: 76 LEDVSHEDAVQVLKATKERVTIVVSRLTAYYSEQTDSAPSPPTLPKQTPPPPTPEVIE 133
Score = 33.5 bits (73), Expect = 1.1
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 132 GGTRTDGVFISRIALESAVYNSGCLKVGDEILAVNLVDV 170
GG +G+FIS I SG L+ GD+I AVN VD+
Sbjct: 201 GGEENEGIFISFILAGGVADLSGELRRGDQIKAVNDVDL 239
>SB_19709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 45.6 bits (103), Expect = 3e-04
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 948 KRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLFSRCLFQMTLDALGVCL 1007
+ L+E +A V+LT E D++ ITGVLK YLRELP+PL + L+ + A +C+
Sbjct: 281 EEALQEQAAFDAGMVDLT-EFDCDVHAITGVLKQYLRELPEPLMTFALYDDWIQAARLCV 339
>SB_7782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 44.8 bits (101), Expect = 5e-04
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLF 991
G+ I G+YR G R ++ F+ R + + + +++ +TG LK +L+ LP+PL
Sbjct: 286 GMQIEGIYRKSGKIEDIRTIQNSFDEK-RDADFSALEM-NVHAVTGALKKFLKLLPEPLI 343
Query: 992 SRCLFQMTLDALGVCL--PDDREGNARLMASIVECLPRAAR 1030
L LDA G P EG + L S +E + ++ R
Sbjct: 344 PNNLQNNILDATGCVFVRPHGTEGVSFLNCSTLEIVFKSFR 384
>SB_40773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 44.0 bits (99), Expect = 8e-04
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 933 LDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLFS 992
+D GL+R+ G ++ L+E +R T +L +V + VLK +L ELP+PL +
Sbjct: 72 VDKEGLFRISGNKKRQEELKELIDRGD-TPKLGCGKFTAHDVAS-VLKQFLGELPEPLLT 129
Query: 993 RCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNKM 1052
+ ++ L + + + + +P R+ L LL+ L LV+ NKM
Sbjct: 130 QAPYRAYLQVTEISNDQGNAKHVEALQLLFLMIPPENRSLLHNLLELLKLVL-ENPNNKM 188
Query: 1053 SPQHLAVALAPPLM 1066
+ +LAV P ++
Sbjct: 189 TAYNLAVVFCPNVL 202
>SB_31303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 43.6 bits (98), Expect = 0.001
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 896 LFGSELEAVVAREIRPPNAPPVPLXXXXXXXXXXXXGLDIIGLYRLCGAASKKRVLREGF 955
+FG +L V E R VP+ GL+ GL+RL G A L+ F
Sbjct: 97 MFGGDLCETVKFEARKGGGF-VPIVVDVCIEYIKKYGLEEEGLFRLPGNAKHISTLKAQF 155
Query: 956 ERNARTVELTPEAVPDINVITGVLKDYLRELPQPLFSRCLFQMTLDA 1002
R + EL+ E DI+ + +LK YLREL +P+ F++ L A
Sbjct: 156 NRG-ESPELSDEK--DIHTVASLLKLYLRELSEPVIPYDFFEVFLTA 199
>SB_44674| Best HMM Match : PDZ (HMM E-Value=1.8e-05)
Length = 84
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 138 GVFISRIALESAVYNSGCLKVGDEILAVNLVDVRRMSLDDVVIIMS 183
G+FIS+IA + G LKVGD++L++N D++ DD V +++
Sbjct: 1 GIFISKIAKDGTAERDGRLKVGDKVLSINSRDMKNAKHDDAVNMLT 46
>SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 41.5 bits (93), Expect = 0.004
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLF 991
GLD G++RL G+++ +++ FE R DIN + G+L+ Y REL PLF
Sbjct: 480 GLDHPGIFRLSGSSTDINDMKQLFECG-RDPLAGLNHWKDINAVAGLLRVYFRELEDPLF 538
Query: 992 SRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHL 1040
+Q ++A P + E R + ++ LP + + +L L
Sbjct: 539 PSSHYQQFIEASR--FPTN-EDVIRQVTCVINELPDSVNRVMKYLFKFL 584
>SB_27031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 41.1 bits (92), Expect = 0.006
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 113 VEIVKRPGQTLGLYIREGDGGTRTDGVFISRIALESAVYNSGCLKVGDEILAVN 166
V + K+PG+ LG+ I E G+ I+ +A + SG + VGD+IL+VN
Sbjct: 237 VVVNKKPGEALGVMIVESGWGSMIPTAIIAHLAKDGPAAKSGRVNVGDQILSVN 290
>SB_48346| Best HMM Match : PDZ (HMM E-Value=1.5e-33)
Length = 708
Score = 40.3 bits (90), Expect = 0.010
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 83 ILELRQVGRNNIEAAKKFFALQDTRHVVQLVEIVKRPGQTLGLYIREGDGGTRTD-GVFI 141
I E Q R + K+ ++ + V+ +V + G+ LG I G G R D ++I
Sbjct: 486 IRESPQASRKFPDQVKRRGSVDSEKDVLTVVLVKGMAGKGLGFTIVGGRGSPRGDLPIYI 545
Query: 142 SRIALESAVYNSGCLKVGDEILAVNLVDVRRMSLDDVVIIMSIPRRLLLCTRQRKGKSG- 200
+ A G L+ G E+L+VN D+ ++ + + RR ++ + R G SG
Sbjct: 546 KNVLPGGAAAADGRLRRGYEVLSVNGTDMTSVTHREALDFFKNIRRGVVTIKVRTGASGL 605
Query: 201 PGSPSLPRSEHKP 213
P + + E P
Sbjct: 606 PSASTFNTPEPSP 618
Score = 31.5 bits (68), Expect = 4.6
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 141 ISRIALESAVYNSGCLKVGDEILAVNLVDVRRMSLD 176
IS I +S ++ G L VGD+ILA+N D+ + S++
Sbjct: 80 ISEIQPKSLAFSDGRLTVGDKILAINGKDLSKASVE 115
>SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18)
Length = 865
Score = 40.3 bits (90), Expect = 0.010
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 932 GLDIIGLYRLCGAASKKRVLREGFERNART-VELTPEAVPDINVITGVLKDYLRELPQPL 990
GL G+YR +A R L+ + + ++L+ V +V+ VLK + R+L P+
Sbjct: 668 GLYAEGIYRKSPSAVAVRALKNAIVSSGISDLDLSSHVV---HVVAAVLKLFFRQLSSPV 724
Query: 991 FSRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLA 1041
F+ ++ + L D+RE L A +V+ LP A RAT L+ HLA
Sbjct: 725 FTDDVYNEVIRTAD--LSDEREQLETLYA-LVQKLPPANRATFERLVFHLA 772
>SB_26957| Best HMM Match : PDZ (HMM E-Value=0)
Length = 1685
Score = 40.3 bits (90), Expect = 0.010
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 105 DTRHVVQLVEIVKRPGQTLGLYIREGDGGTRTDGVFISRIALESAVYNSGCLKVGDEILA 164
+T +++VE+ + P LG+ I G R GV + + S+V G LK GD+IL
Sbjct: 1287 ETESGLRVVELRREPEVGLGISIAGNKRGQR-QGVHVRHVLENSSVARLGELKAGDQILE 1345
Query: 165 VNLVDVRRMSLDDVVIIM 182
V+ D+R S ++ V ++
Sbjct: 1346 VDGHDLRNASHEEAVEVI 1363
>SB_42550| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 790
Score = 39.5 bits (88), Expect = 0.017
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 933 LDIIGLYRLCGAASKKRVLREGFERNARTVELTPEAVPDINVITGVLKDYLRELPQPLFS 992
++ +G++R G + L++ E N + + D+ +LK Y R+LP P+ +
Sbjct: 332 VESVGIFRKSGGKQRINNLKDMMEDNPEHTDFEGMSPYDL---ADMLKQYFRDLPDPILT 388
Query: 993 RCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNKM 1052
L + T + +P E M + + +P R L LL L V N+M
Sbjct: 389 SKLAE-TFITIHTYIP--AELRVEAMQAAILLMPDENREALQTLLLFLNEVAENSAVNQM 445
Query: 1053 SPQHLAVALAPPL 1065
+ ++L V AP L
Sbjct: 446 NEKNLGVCFAPSL 458
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 39.1 bits (87), Expect = 0.023
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 123 LGLYIREGDGGTRTDGVFISRIA----LESAVYNSGCLKVGDEILAVNLVDVRRMSLDDV 178
+G+ I + G T +GVFI +A + A SG L+ GDEIL VN +R M +DV
Sbjct: 22 MGVTIDKSRGSTVVEGVFIKSVASGKSADQAQSVSGGLRPGDEILEVNGTFLRYMDQEDV 81
Query: 179 V-IIMSIPRRLLLCTRQRK 196
+ I +P ++ + K
Sbjct: 82 IKIFRDLPVTTIMKVNRAK 100
Score = 37.1 bits (82), Expect = 0.092
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 101 FALQDTRHVVQLVEIVKRPGQTLGLYIREGDGGTRTDGVFISRIALESAVYNSGCLKVGD 160
+AL D V VE+ K +LG+++ G GT V + + G ++ GD
Sbjct: 2495 WALADRDSDVFTVELKKDSKGSLGIHV-SGGVGTNCIDVTVRHVVPLGVAAKDGRIRKGD 2553
Query: 161 EILAVNLVDVRRMSLDDVV-IIMSIPRRLLL 190
+L+VN + ++ +V+ ++ ++PRR++L
Sbjct: 2554 RVLSVNGRSTKGLTHQEVLNLLQNLPRRVVL 2584
>SB_33452| Best HMM Match : PDZ (HMM E-Value=1.2e-11)
Length = 278
Score = 39.1 bits (87), Expect = 0.023
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 113 VEIVKRPGQTLGLYIREGDGGTRTDGVFISRIA-LESAVYNSGCLKVGDEILAVNLVDVR 171
+E+ K G +I++G G+FISRI SA + +G L GDE+L +N +
Sbjct: 190 IELQKPDNGLFGFFIQKGYKQFNK-GIFISRIMDSSSAKFLAGLLNPGDEVLEINGQSTK 248
Query: 172 RMSLDDVVIIMSIPRRLLLCTRQRKGK 198
+ +V IM+ RLLL G+
Sbjct: 249 TKTTAEVHNIMASSDRLLLTVMPYTGR 275
>SB_637| Best HMM Match : HR1 (HMM E-Value=2.7e-18)
Length = 686
Score = 38.7 bits (86), Expect = 0.030
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 784 DLYCVLECDRVHKARTVIRNSELDFDWDEAFDLELVDNRQLDVLVYSWDPQHRHKLCYRG 843
+L VL+ D + +T+ + + W + F +EL +R+L+V VY W HR LC
Sbjct: 347 ELCAVLKLDNTYVGQTMWKTAGSQC-WQQQFTIELDKSRELEVGVY-W-RDHR-SLCGVA 402
Query: 844 VITLPDLVARSAMHQLAIKLEPRGTLYVRI 873
L + + H++ + LEP+G L+ +
Sbjct: 403 FFRLEEFLDNQE-HKIKVPLEPQGLLFAEL 431
>SB_48713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 37.9 bits (84), Expect = 0.053
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 972 INVITGVLKDYLRELPQPLFSRCLFQMTLDALGVCLPDDREGNARLMASIVECLPRAARA 1031
+N +TG LK YLRELP+P+ L+Q ++ V D R N + + P AA +
Sbjct: 33 VNEVTGTLKKYLRELPEPVIPSNLYQRFIE---VSRKDPRSRNEAYQYEVRD--PAAAES 87
Query: 1032 TLVFL-LDHLAL 1042
L + DH +L
Sbjct: 88 QLRYAQTDHWSL 99
>SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 36.7 bits (81), Expect = 0.12
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 106 TRHVVQLVEIVKRPGQTLGLYIREGDGGT----RTDGVFISRIALESAVYNSGCLKVGDE 161
T+ V ++ + R + LG+ I G G T +G+FISRI+ G L VGD+
Sbjct: 369 TKVVEEIEYTIHRDTKGLGINIAGGKGSTPYKENDEGIFISRISENGPAGRDGILHVGDK 428
Query: 162 ILAV 165
IL V
Sbjct: 429 ILKV 432
>SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 36.3 bits (80), Expect = 0.16
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 1009 DDREGNARLMASIVECLPRAARATLVFLLDHLALVVAAQDRNKMSPQHLAVALAPPLMLH 1068
DD + + M V LP+A R TL L+ HL V D KM +LA P L+ H
Sbjct: 709 DDDQDSFSAMYQAVSELPQANRDTLACLVVHLQKVSQCTD-CKMPVSNLARVFGPTLVGH 767
Query: 1069 SSP 1071
SSP
Sbjct: 768 SSP 770
>SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17)
Length = 1038
Score = 35.5 bits (78), Expect = 0.28
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 110 VQLVEIVKRPGQTLGLYIREGDGGTRTDGVFISRIALESAVYNSGCLKVGDEILAVNLVD 169
V +E++K LGL + G + ++S I S C+++GDE+L VN
Sbjct: 119 VLTLEMIKPSNGYLGLVL-VGGADSPLKNHYVSDILPNSCASKCDCVRIGDELLEVNGHK 177
Query: 170 VR-RMSLDDVVIIMSIPRRLLLCTRQRKGKSGPGSPSLPRSEHKPP 214
+ R D + I S+P + L + K G+ +L S KPP
Sbjct: 178 LSGRTHADALTIFRSLPSVIKLVVFRNK----DGNKTLLGSLRKPP 219
>SB_56237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 34.7 bits (76), Expect = 0.49
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 584 FTSDEYRAWLSRAPSTSALYETLRPRLPTHYSAENIHDALKNMENASRFGSSLGLAGRRI 643
F ++EYR W+ + + YET P LP +S N+ ++ N ++S S AG I
Sbjct: 23 FGNNEYRYWIMKETESVCQYETDGPGLPPLHS--NMIESTANQSSSSSQDSPRSAAGSSI 80
Query: 644 ERPRHL 649
HL
Sbjct: 81 HLHPHL 86
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 34.7 bits (76), Expect = 0.49
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 106 TRHVVQLVEI-VKRPGQTLGLYIREGDGGTRTD-GVFISRIALESAVYNSGCLKVGDEIL 163
T V Q++EI + R Q G IR GG D +++ +IA G +KVGDE+L
Sbjct: 1264 TGEVTQVLEIELIRKNQGYGFSIR---GGQEMDMPIYVLKIAEGGVADLDGRIKVGDEVL 1320
Query: 164 AVNLVDVRRMSLDDVVIIMSIPRRLLLCTRQRKGKSGPGSPSLPRSEHKPP 214
+N + M D + ++ ++ L R+ P LP E PP
Sbjct: 1321 EINGRSTQHMLHTDAISMIRGGSKVRLVL--RRSSHPPTIDGLPNGE--PP 1367
>SB_1013| Best HMM Match : Peptidase_M1 (HMM E-Value=0.041)
Length = 999
Score = 34.3 bits (75), Expect = 0.65
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 584 FTSDEYRAWLSRAPSTSALYETLRPRLPTHYSAENIHDALKNMENASRFGSSLGLAGRRI 643
F ++EYR W+ + + YET P LP +S N+ ++ N ++S S AG I
Sbjct: 268 FGNNEYRYWIMKETESVCQYETDGPGLPPLHS--NMIESTANQSSSSSQHSPRSAAGSSI 325
Query: 644 ERPRHL 649
HL
Sbjct: 326 HLHPHL 331
>SB_3725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 33.1 bits (72), Expect = 1.5
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 110 VQLVEIVKRPGQTLGLYIREGDGGTRTDGVFISRIALESAVYNSGCLKVGDEILAVNLVD 169
++ + ++K+ LG+ I+ G + IS+I A + L +GD ILAVN D
Sbjct: 290 IRTIRVIKQEVGGLGISIKGGKENRMP--ILISKIFKGLAADQTESLYIGDAILAVNGED 347
Query: 170 VRRMSLDDVV 179
+R + D+ V
Sbjct: 348 LRHATHDEAV 357
>SB_34699| Best HMM Match : Peptidase_S8 (HMM E-Value=1.5e-07)
Length = 785
Score = 32.7 bits (71), Expect = 2.0
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 241 LYSQHGTL--RSTGGHGNAVRPVG-DGREERSRLQLGA-LSPDSAALDLYYNPRPPSDHS 296
L ++HG + S G +G A+ VG G S + +GA +SP+ A + + P +
Sbjct: 324 LVNEHGVIFISSAGNNGPALSTVGCPGGTSESIIGIGAYVSPEMMAAEYSLLEKLPGNQY 383
Query: 297 TWSYRPP 303
TWS R P
Sbjct: 384 TWSSRGP 390
>SB_43064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 139 VFISRIALESAVYNSGCLKVGDEILAVNLVDVRRMSLDDVVIIMSIPRRLLLCTRQR 195
+FI + SG L++GD IL++N +D+ +++ ++ ++ P ++L T QR
Sbjct: 229 IFIKGFVPDGPALKSGELRIGDLILSLNKLDLNSSNMNTILAAITGPMEIIL-TIQR 284
>SB_16171| Best HMM Match : PLAT (HMM E-Value=8e-22)
Length = 407
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 1240 IPGTSAGLAVTLNSALSPRYDSSTNPFLQQYDAEAEAEAWRSA 1282
IPG+SAG +V + S Y QY E + E WRS+
Sbjct: 73 IPGSSAGSSVGVASQFEANYTIDVRSVACQYWREGDLEKWRSS 115
>SB_664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1046
Score = 32.3 bits (70), Expect = 2.6
Identities = 14/20 (70%), Positives = 15/20 (75%)
Query: 1075 LDYQRPIHVLQCLLQIWPPP 1094
L+ Q PIH LQCLLQI P P
Sbjct: 453 LNQQLPIHELQCLLQICPSP 472
>SB_3985| Best HMM Match : C2 (HMM E-Value=0)
Length = 835
Score = 31.9 bits (69), Expect = 3.5
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 784 DLYCVLECDRVHKARTVIRNSELDFDWDEAFDLELVDNRQLDVLVYSWD 832
D Y +LE K RT ++ ++L+ W+E F+ + ++ D+ ++ WD
Sbjct: 389 DPYAILEIG-AQKFRTKVKKNDLNPTWNETFEAFVDNSEGQDIDMFLWD 436
>SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1501
Score = 31.5 bits (68), Expect = 4.6
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 118 RPGQTLGLYIREGDGGTRTDGVFISRIALESAVYNSGCLKVGDEILAVN 166
R G L + +G G R G++I ++ + G L+ GD+++AVN
Sbjct: 987 RGGMGLSIVAAKGAGQDRL-GIYIKQVVKDGPAAKDGRLQAGDQLIAVN 1034
>SB_7446| Best HMM Match : SH2 (HMM E-Value=2.7e-22)
Length = 699
Score = 31.5 bits (68), Expect = 4.6
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 289 PRPPSDHSTWSYRPPPPVITEQPKSSATHFVPYERSYPNTLDSLAEKVHSYYPPES 344
P P S H ++ +PPPP + +P VPY + ++V + PP++
Sbjct: 387 PPPMSTHPEFTSKPPPPPVASKPPPKP---VPYAKKKAEKEKMSLKEVQNALPPQA 439
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 31.5 bits (68), Expect = 4.6
Identities = 23/69 (33%), Positives = 32/69 (46%)
Query: 115 IVKRPGQTLGLYIREGDGGTRTDGVFISRIALESAVYNSGCLKVGDEILAVNLVDVRRMS 174
++ +T GL I G + IS I G L VGD ILAVN +D++
Sbjct: 247 VIVNKDKTEGLGISITGGKEHGVPILISEIHDGMPAARCGGLYVGDAILAVNGIDLQDAK 306
Query: 175 LDDVVIIMS 183
+D V I+S
Sbjct: 307 HNDAVKILS 315
>SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1028
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 128 REGDGGTRTDGVFISRIALESAVYNSGCLKVGDEILAVNLVDVRRMSLDDVVIIM 182
++GDGG +++ + AV G ++ GD +L VN V+ MS DD V ++
Sbjct: 622 KKGDGG-----IYVGSVMKGGAVDLDGRVEPGDMLLQVNDVNFENMSNDDAVRVL 671
>SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 30.7 bits (66), Expect = 8.0
Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Query: 302 PPPPVITEQPKSSATHFVPYERSYPNTLDSLAEKVHSYYPPESGSTRFGGRVPRSGSEQQ 361
PPPP T P T P S P T DS PP T P +E++
Sbjct: 104 PPPPATTSAPPPPTTTAPPATTSPPTTTDSPPTTAAETLPPTDAPTEAPTEPP---TEKK 160
Query: 362 LPRAETHS 369
+ A T +
Sbjct: 161 ISNAVTET 168
>SB_30603| Best HMM Match : PKD_channel (HMM E-Value=1.2e-15)
Length = 1029
Score = 30.7 bits (66), Expect = 8.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 1240 IPGTSAGLAVTLNSALSPRYDSSTNPFLQQYDAEAEAEAWRSA 1282
IPG+SAG +V + S Y QY E ++E W S+
Sbjct: 255 IPGSSAGSSVGVASQFEANYTIDVRSVACQYWREGDSEKWSSS 297
>SB_41041| Best HMM Match : PDZ (HMM E-Value=1.3e-40)
Length = 933
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 138 GVFISRIALESAVYNSGCLKVGDEILAVNLVDVRRMSLDDVV 179
G+F+ + A + G LK D++L+VN V R++ + +
Sbjct: 320 GIFVKSVIAGGAAFKDGRLKAEDQLLSVNNVSFMRLTNTEAI 361
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,187,089
Number of Sequences: 59808
Number of extensions: 1363703
Number of successful extensions: 5175
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 5086
Number of HSP's gapped (non-prelim): 86
length of query: 1292
length of database: 16,821,457
effective HSP length: 91
effective length of query: 1201
effective length of database: 11,378,929
effective search space: 13666093729
effective search space used: 13666093729
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)
- SilkBase 1999-2023 -