Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000452-TA|BGIBMGA000452-PA|IPR000990|Innexin
         (385 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   2.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   4.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   4.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   4.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   4.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   4.9  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/35 (22%), Positives = 21/35 (60%)

Query: 28  MVFRMHYRITSAILFLCCILVTANNLIGEPIACIS 62
           ++F + + I + ++F+ C+LV +  ++   +  IS
Sbjct: 246 LMFAVSFLIITQVIFVICVLVQSEKIVWLHLVYIS 280


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 185 EVLNFANVVGNIFFLDTFLGGAFLTYGTDVVRFS 218
           +V NF + V ++FFL    G   L Y     R S
Sbjct: 368 QVKNFRHSVRSVFFLSEIFGLVNLKYRETYFRLS 401


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 113 PFMLFFQGLLFYIPHWIWKNW 133
           P ++F Q  L +   WIW  W
Sbjct: 204 PPLMFLQDFLSHQHAWIWLVW 224


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 113 PFMLFFQGLLFYIPHWIWKNW 133
           P ++F Q  L +   WIW  W
Sbjct: 437 PPLMFLQDFLSHQHAWIWLVW 457


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 113 PFMLFFQGLLFYIPHWIWKNW 133
           P ++F Q  L +   WIW  W
Sbjct: 437 PPLMFLQDFLSHQHAWIWLVW 457


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query: 73  TFCWITYTFTMPN 85
           TF W TY F +PN
Sbjct: 154 TFGWHTYIFDVPN 166


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)

Query: 178 SFGYFFCEVLNF 189
           SFGY FC  L+F
Sbjct: 69  SFGYLFCASLSF 80


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.140    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,060
Number of Sequences: 317
Number of extensions: 4099
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 7
length of query: 385
length of database: 114,650
effective HSP length: 58
effective length of query: 327
effective length of database: 96,264
effective search space: 31478328
effective search space used: 31478328
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)