Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000452-TA|BGIBMGA000452-PA|IPR000990|Innexin
         (385 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    25   1.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   4.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   4.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   4.4  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 17/46 (36%), Positives = 21/46 (45%)

Query: 154 DDKNNRQNRLVQYLLDTLHMHNTYSFGYFFCEVLNFANVVGNIFFL 199
           D KNN  N  V++ L T  +  T   GYF     N    V  I+FL
Sbjct: 52  DTKNNLLNAYVRFKLVTDCIFVTSEPGYFLYTSKNDNEEVCGIYFL 97


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
          protein.
          Length = 424

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 58 IACISDGANPGHVINTFCWITYTFTMPNTTSKTAA 92
          +  ISD      + N + W    F  PN  +K AA
Sbjct: 12 LLAISDSQAQEKLKNIYSWKALEFAFPNGYAKLAA 46


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 132 NWEEGKVRLISEGMRGTMASIADDKNNRQNRLVQYLLDTLHMHNTYSFGYFFCEVLNFAN 191
           +W E ++++  + + G     +    +R  +L   LLD  +      FG+   EV+   +
Sbjct: 695 SWLE-RIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGS 753

Query: 192 VVG 194
           +VG
Sbjct: 754 IVG 756


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 132 NWEEGKVRLISEGMRGTMASIADDKNNRQNRLVQYLLDTLHMHNTYSFGYFFCEVLNFAN 191
           +W E ++++  + + G     +    +R  +L   LLD  +      FG+   EV+   +
Sbjct: 733 SWLE-RIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGS 791

Query: 192 VVG 194
           +VG
Sbjct: 792 IVG 794


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.326    0.140    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,453
Number of Sequences: 429
Number of extensions: 4436
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 4
length of query: 385
length of database: 140,377
effective HSP length: 59
effective length of query: 326
effective length of database: 115,066
effective search space: 37511516
effective search space used: 37511516
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)