GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000452-TA|BGIBMGA000452-PA|IPR000990|Innexin
         (385 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     40   9e-05
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    27   0.66 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    26   2.0  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         24   6.1  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     24   6.1  

>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 40.3 bits (90), Expect = 9e-05
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 8/126 (6%)

Query: 25  IDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPGHVINTFCWI---TYTF 81
           I N   R+    T  +  LC  L+    +   P + +SDG      + T   +   TY  
Sbjct: 59  IGNRTIRLQVHFTWVLAALCAFLLLVLYISSSPSSLLSDGPRTNSFLRTSAIVYNHTYPL 118

Query: 82  TMPNTTSKT-AAHPGLGDDNDEKRIHSYYQWVPFMLFFQGLLFYIP--HWIWKNWEEGKV 138
           T P  +S   +   G+  D D        QW  +  + +G L +IP    I  +W+EG+ 
Sbjct: 119 TSPIVSSGIYSFRVGIIADLDTNSALKKNQWGSY--YLKGCLSFIPSKRSITVSWDEGEA 176

Query: 139 RLISEG 144
           + +  G
Sbjct: 177 KALQSG 182


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 27.5 bits (58), Expect = 0.66
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 318 ALVRKTQVGDFLLLHLLGQNMSLRVFGEVLDELSRRLNLGSHAPS 362
           A VR+TQ GD LL+   G+  ++RV   + + L  + N+ + APS
Sbjct: 204 AKVRRTQNGDMLLVLKRGKE-AVRVEAGIKNALKDKANVRTLAPS 247


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 3/29 (10%)

Query: 288  VYSAAVCLLPSTRETILKRRF---RFGTP 313
            V   A  LLP+TR  +LKR     R+GTP
Sbjct: 1073 VIGGAPALLPTTRTLLLKRPLVSARYGTP 1101


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 6.1
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 171 LHMHNTYSFGYFFCEVLNFAN-VVGNIFFLDTFL 203
           +  +++  FGY F  V+NF      N++F D F+
Sbjct: 647 MRFYDSLPFGYPFDRVINFNYFYTKNMYFKDVFI 680


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 6.1
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 171 LHMHNTYSFGYFFCEVLNFAN-VVGNIFFLDTFL 203
           +  +++  FGY F  V+NF      N++F D F+
Sbjct: 647 MRFYDSLPFGYPFDRVINFNYFYTKNMYFKDVFI 680


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.326    0.140    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,103
Number of Sequences: 2123
Number of extensions: 15970
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 36
Number of HSP's gapped (non-prelim): 5
length of query: 385
length of database: 516,269
effective HSP length: 65
effective length of query: 320
effective length of database: 378,274
effective search space: 121047680
effective search space used: 121047680
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 49 (23.8 bits)