Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000451-TA|BGIBMGA000451-PA|IPR000437|Prokaryotic
membrane lipoprotein lipid attachment site
(120 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 31 0.003
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 31 0.003
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 0.35
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 1.4
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 1.4
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 22 1.9
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 21 3.3
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 21 3.3
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 21 3.3
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 21 4.3
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 20 5.7
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 19 10.0
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 31.1 bits (67), Expect = 0.003
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 67 QHQVGLVHPAAAHMSHWYGAPHQG--FAPPPTSHNP--YHHH 104
+HQ + PA A M WY HQG P P +HHH
Sbjct: 12 RHQQAVAAPANAPMHSWYAGYHQGAQMGPEQQMWEPQMWHHH 53
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 31.1 bits (67), Expect = 0.003
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 67 QHQVGLVHPAAAHMSHWYGAPHQG--FAPPPTSHNP--YHHH 104
+HQ + PA A M WY HQG P P +HHH
Sbjct: 12 RHQQAVAAPANAPMHSWYAGYHQGAQMGPEQQMWEPQMWHHH 53
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 24.2 bits (50), Expect = 0.35
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 94 PPTSHNPYHHHHLAQLNSMTG 114
PPT ++ HHH + L + G
Sbjct: 127 PPTDNSHVHHHQTSLLGKVEG 147
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 22.2 bits (45), Expect = 1.4
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 87 PHQGFAPP--PTSHNPYHHHHLAQLNSMTG 114
PH PP P NP+ ++ +N +TG
Sbjct: 739 PHPHHQPPRNPVGTNPHDINNPLSVNQLTG 768
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 22.2 bits (45), Expect = 1.4
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 87 PHQGFAPP--PTSHNPYHHHHLAQLNSMTG 114
PH PP P NP+ ++ +N +TG
Sbjct: 631 PHPHHQPPRNPVGTNPHDINNPLSVNQLTG 660
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.8 bits (44), Expect = 1.9
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 68 HQVGLV----HPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHL 106
HQ G V H +A + Y + P + + +HHHHL
Sbjct: 16 HQSGSVAGHHHEQSAAAAAAYRSFPLSLGMSPYASSQHHHHHL 58
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 21.0 bits (42), Expect = 3.3
Identities = 11/37 (29%), Positives = 13/37 (35%)
Query: 74 HPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHLAQLN 110
H + H YG PP YHH + Q N
Sbjct: 38 HYSNYHYEDPYGYTGSEETPPSPQEVYYHHQTIPQDN 74
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 21.0 bits (42), Expect = 3.3
Identities = 11/37 (29%), Positives = 13/37 (35%)
Query: 74 HPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHLAQLN 110
H + H YG PP YHH + Q N
Sbjct: 38 HYSNYHYEDPYGYTGSEETPPSPQEVYYHHQTIPQDN 74
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 21.0 bits (42), Expect = 3.3
Identities = 11/37 (29%), Positives = 13/37 (35%)
Query: 74 HPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHLAQLN 110
H + H YG PP YHH + Q N
Sbjct: 38 HYSNYHYEDPYGYTGSEETPPSPQEVYYHHQTIPQDN 74
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory
receptor candidate 20 protein.
Length = 393
Score = 20.6 bits (41), Expect = 4.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 42 DMIKPLGDATKGFG 55
D+IKPL + TK FG
Sbjct: 13 DVIKPLINLTKIFG 26
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 20.2 bits (40), Expect = 5.7
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 82 HWYGAPHQGFAPP 94
H YG P G PP
Sbjct: 63 HHYGGPPSGGQPP 75
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 19.4 bits (38), Expect = 10.0
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 92 APPPTSHNPYHHHHLAQLNSMTG 114
+PPP +NP H A S G
Sbjct: 279 SPPPHVYNPPDHIQQATPYSAPG 301
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.318 0.133 0.443
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,132
Number of Sequences: 317
Number of extensions: 1108
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 120
length of database: 114,650
effective HSP length: 50
effective length of query: 70
effective length of database: 98,800
effective search space: 6916000
effective search space used: 6916000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.4 bits)
S2: 38 (19.4 bits)
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