Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000451-TA|BGIBMGA000451-PA|IPR000437|Prokaryotic
membrane lipoprotein lipid attachment site
(120 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 36 0.008
U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical pr... 30 0.51
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 29 0.67
AF047657-13|AAY86196.1| 143|Caenorhabditis elegans Hypothetical... 29 0.88
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 2.0
Z81128-9|CAC42344.1| 239|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical pr... 27 2.7
AL132853-1|CAB60440.1| 234|Caenorhabditis elegans Hypothetical ... 27 2.7
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 27 3.6
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 3.6
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 27 3.6
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z54306-6|CAA91090.2| 321|Caenorhabditis elegans Hypothetical pr... 27 4.7
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 27 4.7
AL031268-1|CAD59161.1| 321|Caenorhabditis elegans Hypothetical ... 27 4.7
Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 26 6.2
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 26 6.2
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 26 6.2
Z81592-2|CAB04726.1| 407|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical pr... 26 8.2
U50193-7|AAL11479.1| 327|Caenorhabditis elegans T box family pr... 26 8.2
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 26 8.2
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 26 8.2
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 26 8.2
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 26 8.2
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 26 8.2
AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocar... 26 8.2
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 35.9 bits (79), Expect = 0.008
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 74 HPAAAHMSHWYGAPHQGFAPPPTSHNPYH 102
HPA H + P FAPPP H+P H
Sbjct: 59 HPAQQHPPQHHSVPPNSFAPPPGQHHPQH 87
>U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical
protein F22H10.3 protein.
Length = 79
Score = 29.9 bits (64), Expect = 0.51
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 70 VGLVHPAAAHMSHWYGAPHQGFAPP-PTSHNPYHHHH 105
+ +V P ++ AP G PP PYHHHH
Sbjct: 32 IPMVAPMPVPVAPMMAAPMYGMPPPVVVIEEPYHHHH 68
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 29.5 bits (63), Expect = 0.67
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 87 PHQGFAPPPTSHNPYHHHHLAQLNSM 112
PH PP NP +HHH+ + +M
Sbjct: 544 PHPSQFPPNHPANPMYHHHIMMMRAM 569
>AF047657-13|AAY86196.1| 143|Caenorhabditis elegans Hypothetical
protein F37B4.14 protein.
Length = 143
Score = 29.1 bits (62), Expect = 0.88
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 97 SHNPYHHHHLAQLNSMTGW 115
S+N Y HHHL++ ++ GW
Sbjct: 39 SNNSYEHHHLSRSSNNVGW 57
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 68 HQVGLVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHLAQLNSMT 113
HQ L +P + PH PPP + Y+HH Q + T
Sbjct: 81 HQYHLQYPPPHGLGPPPPPPHYYTQPPPPPQSGYYHHQQQQHSGPT 126
>Z81128-9|CAC42344.1| 239|Caenorhabditis elegans Hypothetical
protein T23D8.9b protein.
Length = 239
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 75 PAAAHMSHWYGAPHQGFAPPPTSHNPYHH 103
P +H S W+ APH G PP ++P H
Sbjct: 27 PTTSHPS-WHQAPHPGLPTPP--YHPQQH 52
>Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical
protein T23D8.9a protein.
Length = 811
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 75 PAAAHMSHWYGAPHQGFAPPPTSHNPYHH 103
P +H S W+ APH G PP ++P H
Sbjct: 27 PTTSHPS-WHQAPHPGLPTPP--YHPQQH 52
>AL132853-1|CAB60440.1| 234|Caenorhabditis elegans Hypothetical
protein Y80D3A.3 protein.
Length = 234
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 67 QHQVGLVHPAAAHMSHWYGAPHQGFAPPPTS--HNPYHHHHLAQLNSMTGWRSEYT 120
Q Q + P++ H A H GF PPP S H+ + H A G R+ ++
Sbjct: 102 QQQYSQLSPSS--FPHPMVAHHAGFIPPPPSFLHHQHQQHPRAPSEKRRGARTPFS 155
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 67 QHQVGLVHPAAAHMSHWYGAPHQGFAPPPTS--HNPYHHHHLAQLNSMTGWRSEY 119
QH + AAA Q +A P +PY H + Q++ G S+Y
Sbjct: 162 QHAQAMAAAAAAQQQQQQHLQQQQYAQNPQQMHDSPYRQHQMMQMHQHPGHPSQY 216
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 67 QHQVGLVHPAAAHMSHWYGAPHQGFAPPPTS--HNPYHHHHLAQLNSMTGWRSEY 119
QH + AAA Q +A P +PY H + Q++ G S+Y
Sbjct: 160 QHAQAMAAAAAAQQQQQQHLQQQQYAQNPQQMHDSPYRQHQMMQMHQHPGHPSQY 214
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 75 PAAAHMSHWYGAPHQGFAPPPTSHNPYH 102
PA++H H AP F P P + +P+H
Sbjct: 1284 PASSHHEH-IAAPQARFTPTPGAPSPWH 1310
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 74 HPAAAHMSHWYGAPH-QGFAPPPTSHNPYHHHHLAQ 108
HP S + H Q F PP++ +PY+H Q
Sbjct: 22 HPGQQQSSSSSSSSHLQDFQSPPSASHPYYHQQQPQ 57
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 69 QVGLVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHLAQ 108
+ G+VHPA S P+ PP NP H+ AQ
Sbjct: 715 EAGMVHPAHGSESKGTEDPNVLEPSPPAPKNPVEHNLEAQ 754
>Z54306-6|CAA91090.2| 321|Caenorhabditis elegans Hypothetical
protein B0457.2 protein.
Length = 321
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 74 HPAAAHMSHWYGAPHQGFAPPPTSHNP 100
H +H H YG+P+Q + H+P
Sbjct: 124 HHRKSHRGHHYGSPYQQYYQQQQHHDP 150
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 69 QVGLVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHLAQ 108
+ G+VHPA S P+ PP NP H+ AQ
Sbjct: 715 EAGMVHPAHGSESKGTEDPNVLEPSPPAPKNPVEHNLEAQ 754
>AL031268-1|CAD59161.1| 321|Caenorhabditis elegans Hypothetical
protein B0457.2 protein.
Length = 321
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 74 HPAAAHMSHWYGAPHQGFAPPPTSHNP 100
H +H H YG+P+Q + H+P
Sbjct: 124 HHRKSHRGHHYGSPYQQYYQQQQHHDP 150
>Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical
protein T04C10.4 protein.
Length = 208
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 84 YGAPHQGFAPPPTSHNPYHHHH 105
Y H P HN +HHHH
Sbjct: 14 YNGMHNQTHSTPQYHNHHHHHH 35
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 66 GQHQVGLVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHH 104
G H G H A AH H H +P H+ HHH
Sbjct: 427 GHH--GEHHHAPAHHGHHESHGHGHHSPAHHGHHGEHHH 463
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Query: 75 PAAAHMSHWYGAPHQGFAPPP 95
P M GAPH GF P P
Sbjct: 26 PMVPGMGQMMGAPHAGFVPSP 46
>Z81592-2|CAB04726.1| 407|Caenorhabditis elegans Hypothetical
protein T16G1.2 protein.
Length = 407
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 58 AFPSAMDFGQHQVGLVH-PAAAHMSHWYGAPHQGFAPPPTSHNP 100
AFP A G + VG+ H P+ ++ + P Q P NP
Sbjct: 254 AFPQASQMGLNPVGMPHQPSNPLVASNFNQPQQPVTLTPLGTNP 297
>Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical
protein C41G7.5b protein.
Length = 560
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 93 PPPTSHNPYHHHHLAQLN 110
P P++H+ HHH L Q N
Sbjct: 530 PTPSTHHDLHHHPLKQDN 547
>Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical
protein C41G7.5a protein.
Length = 602
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 93 PPPTSHNPYHHHHLAQLN 110
P P++H+ HHH L Q N
Sbjct: 572 PTPSTHHDLHHHPLKQDN 589
>U50193-7|AAL11479.1| 327|Caenorhabditis elegans T box family
protein 7 protein.
Length = 327
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 73 VHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHLAQLNSM 112
VHP + W+ F S+NP+++ LNSM
Sbjct: 139 VHPQSPRSGEWWMTDGVDFKMAKLSNNPFNNDGHIVLNSM 178
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 88 HQG-FAPPPTSHNPYHHHHLAQLNSMTGWRSEY 119
HQG +P P+SH H H+ + + T E+
Sbjct: 2851 HQGPHSPAPSSHTEAEHPHIVETTTTTTVTREF 2883
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 88 HQG-FAPPPTSHNPYHHHHLAQLNSMTGWRSEY 119
HQG +P P+SH H H+ + + T E+
Sbjct: 2851 HQGPHSPAPSSHTEAEHPHIVETTTTTTVTREF 2883
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
Query: 84 YGAPHQGFAPPPTSHNPYHHHH 105
YG P G P P H HHHH
Sbjct: 109 YGGPGYGGGPGPHHH---HHHH 127
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/40 (32%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 66 GQHQVGLVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHH 105
G+H G H H H H P+ H +HHHH
Sbjct: 383 GRH--GPPHCPGRHGHHGPPHHHHHDGRSPSRHGHHHHHH 420
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
Query: 84 YGAPHQGFAPPPTSHNPYHHHH 105
YG P G P P H HHHH
Sbjct: 109 YGGPGYGGGPGPHHH---HHHH 127
>AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocarbon
receptor orthologAHR-1 protein.
Length = 602
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 93 PPPTSHNPYHHHHLAQLN 110
P P++H+ HHH L Q N
Sbjct: 572 PTPSTHHDLHHHPLKQDN 589
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.133 0.443
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,586,646
Number of Sequences: 27539
Number of extensions: 94873
Number of successful extensions: 407
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 372
Number of HSP's gapped (non-prelim): 44
length of query: 120
length of database: 12,573,161
effective HSP length: 73
effective length of query: 47
effective length of database: 10,562,814
effective search space: 496452258
effective search space used: 496452258
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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