Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000451-TA|BGIBMGA000451-PA|IPR000437|Prokaryotic
membrane lipoprotein lipid attachment site
(120 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g24265.1 68417.m03482 expressed protein 29 0.63
At1g73840.1 68414.m08549 hydroxyproline-rich glycoprotein family... 29 0.63
At2g20570.1 68415.m02402 golden2-like transcription factor (GLK1... 29 0.83
At1g49010.1 68414.m05495 myb family transcription factor contain... 29 0.83
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 29 1.1
At5g06839.1 68418.m00773 bZIP family transcription factor contai... 28 1.5
At4g14900.1 68417.m02288 hydroxyproline-rich glycoprotein family... 28 1.5
At2g28610.1 68415.m03478 homeobox-leucine zipper transcription f... 28 1.5
At2g18510.1 68415.m02157 pre-mRNA splicing factor, putative simi... 28 1.5
At2g03500.1 68415.m00309 myb family transcription factor contain... 28 1.5
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 27 3.4
At3g46640.1 68416.m05063 myb family transcription factor contain... 27 3.4
At1g05450.2 68414.m00553 protease inhibitor/seed storage/lipid t... 27 3.4
At3g10810.1 68416.m01301 zinc finger (C3HC4-type RING finger) fa... 27 4.4
At2g25180.1 68415.m03011 two-component responsive regulator fami... 27 4.4
At1g61100.1 68414.m06883 disease resistance protein (TIR class),... 27 4.4
At1g31710.1 68414.m03891 copper amine oxidase, putative similar ... 27 4.4
At3g21215.1 68416.m02681 RNA-binding protein, putative contains ... 26 5.9
At1g44050.1 68414.m05082 DC1 domain-containing protein contains ... 26 5.9
At1g28360.1 68414.m03484 ERF domain protein 12 (ERF12) identical... 26 5.9
At5g32775.1 68418.m03902 hypothetical protein 26 7.8
At5g17650.1 68418.m02069 glycine/proline-rich protein glycine/pr... 26 7.8
At3g18360.1 68416.m02335 VQ motif-containing protein contains PF... 26 7.8
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 26 7.8
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 26 7.8
At2g28810.1 68415.m03503 Dof-type zinc finger domain-containing ... 26 7.8
At1g60060.1 68414.m06766 expressed protein 26 7.8
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 26 7.8
At1g36370.1 68414.m04518 glycine hydroxymethyltransferase, putat... 26 7.8
At1g22020.1 68414.m02755 glycine hydroxymethyltransferase, putat... 26 7.8
At1g06780.1 68414.m00721 glycosyl transferase family 8 protein c... 26 7.8
>At4g24265.1 68417.m03482 expressed protein
Length = 140
Score = 29.5 bits (63), Expect = 0.63
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 72 LVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHL 106
LV P A + +W+ + PP TS P+ HHL
Sbjct: 37 LVEPTAPPLPYWFDET-RSLCPPETSSFPWTTHHL 70
>At1g73840.1 68414.m08549 hydroxyproline-rich glycoprotein family
protein similar to proline-rich protein precursor
GB:AAC34889 [Glycine max]
Length = 388
Score = 29.5 bits (63), Expect = 0.63
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 71 GLVHPAAAHMSHWYGAPHQGFAPPPTSHNP 100
G ++PA MSH + Q APPP SH+P
Sbjct: 158 GHLNPAVTSMSHPQSSQVQN-APPPASHHP 186
>At2g20570.1 68415.m02402 golden2-like transcription factor (GLK1)
identical to golden2-like transcription factor
GI:13311003 from [Arabidopsis thaliana]; contains Pfam
profile: PF00249 Myb-like DNA-binding domain
Length = 420
Score = 29.1 bits (62), Expect = 0.83
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Query: 86 APHQGFAPPP---TSHNPYHHHHLAQLN 110
AP GF PPP + P HHHH L+
Sbjct: 248 APTLGFPPPPPVAVAPPPVHHHHFRPLH 275
>At1g49010.1 68414.m05495 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 314
Score = 29.1 bits (62), Expect = 0.83
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 79 HMSHWYGAPHQGFAPPPTSHNPYHHHHL 106
HM G P PP +H+ +HHHHL
Sbjct: 262 HMGSAVGTPVM-LPPPMGTHHHHHHHHL 288
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/44 (36%), Positives = 19/44 (43%)
Query: 53 GFGGSAFPSAMDFGQHQVGLVHPAAAHMSHWYGAPHQGFAPPPT 96
GFG SA S FG V PA+ S +G AP P+
Sbjct: 79 GFGSSASSSTPSFGFGSSASVTPASTTPSFGFGTAASSSAPAPS 122
>At5g06839.1 68418.m00773 bZIP family transcription factor contains
Pfam profile: PF00170 bZIP transcription factor
Length = 417
Score = 28.3 bits (60), Expect = 1.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 93 PPPTSHNPYHHHHLAQ 108
PP T+ +P HHHH Q
Sbjct: 51 PPSTAPSPLHHHHTTQ 66
>At4g14900.1 68417.m02288 hydroxyproline-rich glycoprotein family
protein
Length = 532
Score = 28.3 bits (60), Expect = 1.5
Identities = 9/15 (60%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
Query: 93 PPPTSH-NPYHHHHL 106
PPP H +P+HHHH+
Sbjct: 513 PPPVYHPHPHHHHHI 527
Score = 26.6 bits (56), Expect = 4.4
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 92 APPPTSHNPYHHHH 105
APPP ++P+ HHH
Sbjct: 511 APPPPVYHPHPHHH 524
>At2g28610.1 68415.m03478 homeobox-leucine zipper transcription
factor (PRESSED FLOWER) identical to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 244
Score = 28.3 bits (60), Expect = 1.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Query: 98 HNPYHHHH 105
HNPYHHHH
Sbjct: 111 HNPYHHHH 118
>At2g18510.1 68415.m02157 pre-mRNA splicing factor, putative similar
to SP|Q15427 Splicing factor 3B subunit 4 (Spliceosome
associated protein 49) (SAP 49) (SF3b50) (Pre-mRNA
splicing factor SF3b 49 kDa subunit) {Homo sapiens};
contains Pfam profile PF00076: RNA recognition motif.
(a.k.a. RRM, RBD, or RNP domain)
Length = 363
Score = 28.3 bits (60), Expect = 1.5
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 10/57 (17%)
Query: 52 KGFGGSAFPSAMD-FGQHQVGLVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHLA 107
+GFGG P G HQ G P HM QG PP PY HHH++
Sbjct: 307 QGFGGPRPPPPPQAMGMHQHGGWPPQ--HMQQ------QG-GPPQQQQPPYQHHHMS 354
>At2g03500.1 68415.m00309 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 432
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/47 (31%), Positives = 17/47 (36%)
Query: 68 HQVGLVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHLAQLNSMTG 114
HQV H A + Q F P P HHHH N +G
Sbjct: 331 HQVHHHHTNTAGPPPPHFCSSQEFYTTPPPPQPLHHHHFQTFNGSSG 377
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 27.1 bits (57), Expect = 3.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 94 PPTSHNPYHHHHL 106
PP+SH P H HHL
Sbjct: 596 PPSSHMPLHPHHL 608
>At3g46640.1 68416.m05063 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 323
Score = 27.1 bits (57), Expect = 3.4
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Query: 48 GDATKGFGGSAFPSAMDFGQHQVGLVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHH 104
G + G G P A +G Q+ + P AH G HQ P N HHH
Sbjct: 233 GGGSSGNVGVPIPGA--YGTQQM-MQMPVYAHHMGMQGYHHQNHNHDPYHQNHRHHH 286
>At1g05450.2 68414.m00553 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related similar to geranyl
diphosphate synthase large subunit [Mentha x piperita]
GI:6449052
Length = 205
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 85 GAPHQGFAPPPTSHNPYHHHHL 106
G GFAPPP S +P H L
Sbjct: 167 GGDPMGFAPPPPSSSPSSSHSL 188
>At3g10810.1 68416.m01301 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 496
Score = 26.6 bits (56), Expect = 4.4
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 92 APPPTSHNPYHHHH 105
+P P+ H+ +HHHH
Sbjct: 322 SPSPSPHSKHHHHH 335
>At2g25180.1 68415.m03011 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
Length = 596
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 74 HPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHH 105
H + HW A PPP +HN +H
Sbjct: 426 HQINKRLEHWSNAVSSSTHPPPPAHNSNSINH 457
>At1g61100.1 68414.m06883 disease resistance protein (TIR class),
putative domain signature TIR exists, suggestive of a
disease resistance protein.
Length = 808
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 79 HM-SHWYGAPHQGFAPPPTSHNP 100
HM ++Y +P+QG+ PP H P
Sbjct: 297 HMPQYFYPSPYQGYPYPPMQHMP 319
>At1g31710.1 68414.m03891 copper amine oxidase, putative similar
to copper amine oxidase [Lens culinaris]
gi|15451834|gb|AAB34918
Length = 681
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 70 VGLVHPAAAHMSHWYGAPHQGFAPPP 95
VGL P + + WY +P+ PPP
Sbjct: 62 VGLNEPNKSLVLSWYSSPNHTIKPPP 87
>At3g21215.1 68416.m02681 RNA-binding protein, putative contains RNA
recognition motif, Pfam:PF00076; contains AT-AC splice
sites at intron 8
Length = 339
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 84 YGAPHQGFAPPPTSHNPYHHHH 105
+G PH AP P ++PY +H
Sbjct: 181 WGPPHGYMAPAPPPYDPYAGYH 202
>At1g44050.1 68414.m05082 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 530
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 98 HNPYHHHHLAQLNSMTGWRSEY 119
H+P+H HHL S+T S+Y
Sbjct: 225 HHPFHSHHLRHEMSITYDESKY 246
>At1g28360.1 68414.m03484 ERF domain protein 12 (ERF12) identical to
ERF domain protein 12(AtERF12) GI:15207791 from
[Arabidopsis thaliana]
Length = 189
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 79 HMSHWYGAPHQGFAPPPTSHNPYHHHHLAQLNSMTGWRSEYT 120
H W+ AP PP + H+ HH + + S+Y+
Sbjct: 96 HQQLWFAAPPP--VPPSSDHHHQHHRIFLRTGVLNDKTSDYS 135
>At5g32775.1 68418.m03902 hypothetical protein
Length = 240
Score = 25.8 bits (54), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 101 YHHHHLAQLNSMTGWRS 117
YHHHH + SMT +R+
Sbjct: 146 YHHHHHSTAYSMTSFRA 162
>At5g17650.1 68418.m02069 glycine/proline-rich protein
glycine/proline-rich protein GPRP - Arabidopsis
thaliana, EMBL:X84315
Length = 173
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/60 (26%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Query: 46 PLGDATKGFGGSAFPSAMDFGQHQVGLVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHH 105
P G G+ +P G H G+ A ++ GA H H Y HHH
Sbjct: 77 PAGYPAHGYPSHGYPRPSHSGHHHGGIGAIIAGGVAAAAGAHHMSH-----HHGHYGHHH 131
>At3g18360.1 68416.m02335 VQ motif-containing protein contains
PF05678: VQ motif
Length = 285
Score = 25.8 bits (54), Expect = 7.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 95 PTSHNPYHHHH 105
P H+P+HHHH
Sbjct: 10 PYHHHPHHHHH 20
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 25.8 bits (54), Expect = 7.8
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 65 FGQHQVGLVHPAAAHM-----SHWYGA-PHQGFAPPPTSHNPYHHHHLAQLNSMTGW 115
F H G HP AH +H G+ P G PP +H P+ S+ GW
Sbjct: 199 FVDHTCG--HPNGAHTPSPTTNHLMGSVPKVGGFPPLGAHGPFQPTPAPLTTSLAGW 253
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 25.8 bits (54), Expect = 7.8
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 65 FGQHQVGLVHPAAAHM-----SHWYGA-PHQGFAPPPTSHNPYHHHHLAQLNSMTGW 115
F H G HP AH +H G+ P G PP +H P+ S+ GW
Sbjct: 199 FVDHTCG--HPNGAHTPSPTTNHLMGSVPKVGGFPPLGAHGPFQPTPAPLTTSLAGW 253
>At2g28810.1 68415.m03503 Dof-type zinc finger domain-containing
protein similar to zinc finger protein OBP2 GI:5059394
from [Arabidopsis thaliana]
Length = 340
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Query: 71 GLVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHL 106
GL P +W G QG P +S N +HH HL
Sbjct: 309 GLTSPGNQSNQYWTG---QGL--PGSSSNDHHHQHL 339
>At1g60060.1 68414.m06766 expressed protein
Length = 386
Score = 25.8 bits (54), Expect = 7.8
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 48 GDATKGFGGSAFPSAMDFGQHQVGLVHPAAAHMSHW---YGAPHQGFAPPPTSHN-PYHH 103
G+ + G GGSA DF Q+Q GL MSH YG G SH Y
Sbjct: 84 GEGSGGGGGSAAYGNSDFQQYQ-GLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKE 142
Query: 104 HHLAQLNSMTGWRS 117
+ ++N ++ W +
Sbjct: 143 PNDQEINFLSAWHN 156
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 25.8 bits (54), Expect = 7.8
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 97 SHNPYHHHHLAQLN 110
S++P+HHHH Q N
Sbjct: 237 SNSPHHHHHQTQQN 250
>At1g36370.1 68414.m04518 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative similar to serine
hydroxymethyltransferase [Chlamydomonas reinhardtii]
GI:17066746; contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 598
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 66 GQHQVGLVHPAAAHMSHWYGAP 87
G+ +GL P+ HMSH Y P
Sbjct: 247 GERIMGLDSPSGGHMSHGYCTP 268
>At1g22020.1 68414.m02755 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative similar to serine
hydroxymethyltransferase [Chlamydomonas reinhardtii]
GI:17066746; contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 599
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 66 GQHQVGLVHPAAAHMSHWYGAP 87
G+ +GL P+ HMSH Y P
Sbjct: 251 GERIMGLDSPSGGHMSHGYYTP 272
>At1g06780.1 68414.m00721 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 589
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Query: 53 GFGGSAFPSAMDFGQHQVGLVHPAAAHMSHWYGAPHQGFAPPPTSHNPYHHHHLAQLN 110
G G + A+D Q ++H M W + + H PYHH +L Q N
Sbjct: 532 GLGRESGVKAVDI--EQAAVIHYDGV-MKPWLDIGKENYKRYWNIHVPYHHTYLQQCN 586
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.133 0.443
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,537,984
Number of Sequences: 28952
Number of extensions: 91412
Number of successful extensions: 492
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 451
Number of HSP's gapped (non-prelim): 51
length of query: 120
length of database: 12,070,560
effective HSP length: 73
effective length of query: 47
effective length of database: 9,957,064
effective search space: 467982008
effective search space used: 467982008
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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