GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000449-TA|BGIBMGA000449-PA|undefined
         (205 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          32   0.011
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   3.7  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 32.3 bits (70), Expect = 0.011
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 118 PMMGAPPSKQREGAQPDSCAQDTSQPSGEYNAQYNAAGGDYYNYQGKGYSGAQQQNK 174
           P   A P+ +     P+S A D S      N   +++ G   NY G GY   QQQ +
Sbjct: 77  PSSVASPNSRASNMSPESSASDQSAAYTLQNLNLSSSAGTM-NYPGMGYQQQQQQQQ 132


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 163 GKGYSGAQQQNKPRPNKTRTSAEA 186
           G G +GA++Q + R N  RT+ +A
Sbjct: 574 GVGATGAEKQQQNRSNHHRTTEQA 597


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.310    0.127    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,376
Number of Sequences: 2123
Number of extensions: 6442
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 3
length of query: 205
length of database: 516,269
effective HSP length: 61
effective length of query: 144
effective length of database: 386,766
effective search space: 55694304
effective search space used: 55694304
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 46 (22.6 bits)