GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000448-TA|BGIBMGA000448-PA|undefined
         (559 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    27   1.3  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    26   2.3  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   7.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   7.1  

>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 27.1 bits (57), Expect = 1.3
 Identities = 10/56 (17%), Positives = 27/56 (48%)

Query: 158 FVDKNHFFAVANTKESRKDEKYRCFLKNRDDDLYIGASITPECNTLKTVEKSPERY 213
           F D+ H+    +          +C+L N+D  +    +++P+ N ++ +  + +R+
Sbjct: 153 FGDEEHYIFQHDNDSKHTSRTVKCYLANQDVQVLPWPALSPDLNPIENLWSTLKRH 208


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 26.2 bits (55), Expect = 2.3
 Identities = 10/55 (18%), Positives = 26/55 (47%)

Query: 158 FVDKNHFFAVANTKESRKDEKYRCFLKNRDDDLYIGASITPECNTLKTVEKSPER 212
           F D+ H+    +          +C+L N+D  +    +++P+ N ++ +  + +R
Sbjct: 225 FGDEEHYIFQHDNDSKHTSRTVKCYLANQDVQVLPWPALSPDLNPIENLWSTLKR 279


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 7.1
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 303 HHNIIRYRKGLAMIQSNFHTVCSWVQFPNKQQWRYDIFLRKDPSPIRC 350
           H  I+ Y K L + +       +W  F N   +R D+F+R  P  I C
Sbjct: 197 HKLIVMYLKYLELEKHQNMMQMAW-NFMN-DSFRTDVFVRYQPETIAC 242


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 7.1
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 448 LDPFSKYRCWVYQRADLNRVLMSQALGPY 476
           L P  KY  W++ + DLN +L  Q L P+
Sbjct: 396 LVPQKKYIVWLHDQLDLNSML--QPLNPH 422


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.139    0.447 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,364
Number of Sequences: 2123
Number of extensions: 27629
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 38
Number of HSP's gapped (non-prelim): 5
length of query: 559
length of database: 516,269
effective HSP length: 67
effective length of query: 492
effective length of database: 374,028
effective search space: 184021776
effective search space used: 184021776
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 50 (24.2 bits)