Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000447-TA|BGIBMGA000447-PA|IPR003960|AAA-protein
subdomain, IPR003593|AAA ATPase, IPR009010|Aspartate
decarboxylase-like fold, IPR003338|AAA ATPase VAT, N-terminal,
IPR004201|Cell division protein 48, CDC48, domain 2, IPR003959|AAA
ATPase, central region
(878 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 580 e-166
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 178 3e-45
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 149 1e-36
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 147 7e-36
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 146 1e-35
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 144 4e-35
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 144 5e-35
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 144 5e-35
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 142 3e-34
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 136 1e-32
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 136 1e-32
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 129 1e-30
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 128 2e-30
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 127 6e-30
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 114 4e-26
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 114 6e-26
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 91 8e-19
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 82 3e-16
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 79 3e-15
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 69 4e-12
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 59 2e-09
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 34 0.075
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 33 0.13
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 32 0.40
SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 31 0.53
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 31 0.69
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 31 0.69
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 31 0.92
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 31 0.92
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 31 0.92
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 31 0.92
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 1.6
SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces... 29 3.7
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 29 3.7
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 29 3.7
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 29 3.7
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 4.9
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 28 4.9
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 28 4.9
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 28 6.5
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 6.5
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 27 8.6
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 27 8.6
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 8.6
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 580 bits (1433), Expect = e-166
Identities = 310/594 (52%), Positives = 403/594 (67%), Gaps = 17/594 (2%)
Query: 2 KAAKCPSDELAITNCALIHQDDFPSDIKHIEVSTGPSQHFVFSIRFYNGVDRGTVGFSAP 61
+ K S E A+TNC ++ P D K + S+ VFS + G +G +G S P
Sbjct: 62 RIVKATSTEDALTNCIIVS----PMDFKQQYIIVDNSR--VFSTKPVPGFPQGCLGASQP 115
Query: 62 QRKWATLSIGQTI---DVKPFKPSSAECLCSVTLEADFMMKKTTSTDPYDSEQMARDFLI 118
R+WA+ S+ Q + D P+ P A L S+TLE DF + T+ +P+D E+MA+ F
Sbjct: 116 HREWASWSLNQQVHVADYDPYGPHGAPYLHSMTLEVDFQNRNRTTNEPFDGEEMAKLFCS 175
Query: 119 QFANQVFTVGQQLAFLFQEKKVLSLIVKNLEAVDV-VALAAGANAVPRRVRMGRLLPDAS 177
+ +QVF+ GQ++ F F+ + + V+ + VD+ + A + G L
Sbjct: 176 SYQSQVFSPGQKIVFDFRSYNIKAT-VRTISCVDLLIGENQDAENTADTSKRGLLTSQTE 234
Query: 178 VQFDKAENSSLNLIGKAKGKQPRQS-IINPDWDFGKMGIGGLDNEFNAIFRRAFASRVFP 236
+QF KA +S+L L KA +P + I+ P + F MGIGGLD+EF+AIFRRAFASR+FP
Sbjct: 235 IQFFKAAHSALRL--KASMTRPASNAILQPGFKFEDMGIGGLDSEFSAIFRRAFASRLFP 292
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
P +VE+LG HVKGILLYGPPGTGKTL+ARQIGKMLNAREPKIVNGP+IL+KYVG+SE N
Sbjct: 293 PGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEEN 352
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV 356
+R+LFADAE E + G SGLHIIIFDE+DAICK RGS GG+TGV D VVNQLL+K+DGV
Sbjct: 353 VRKLFADAEREYRDRGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQVVNQLLAKMDGV 412
Query: 357 DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIA 416
DQLNNILVIGMTNR+DMIDEALLRPGRLEV MEI LPDE GR+QIL IHT RM +
Sbjct: 413 DQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILE 472
Query: 417 EDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVERTDFL 476
DVD ELA+LTKNFSGAE+ GL+++A S A R IK + V +E + V R DFL
Sbjct: 473 NDVDMEELASLTKNFSGAEIAGLIKSASSFAFYRHIKVGTTAAVSGN-LENIKVNRNDFL 531
Query: 477 HALENDIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLVSVLL 536
+AL ++++PA+G S E LE + GI+N+G + I +G+L++QQ + +E + LVSVLL
Sbjct: 532 NAL-SEVRPAYGVSEEELESRVQGGIINFGKHIEEIITEGKLFVQQVKNSERTRLVSVLL 590
Query: 537 EGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKV-REKYKT 589
GP SGKTALAA +A S+FPFVK+ S E MVG E A+ + +V + YK+
Sbjct: 591 SGPIASGKTALAATIALGSEFPFVKLVSAESMVGMNENARVAHVNRVFEDSYKS 644
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 178 bits (433), Expect = 3e-45
Identities = 119/335 (35%), Positives = 176/335 (52%), Gaps = 20/335 (5%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
P++ + +G K +GIL+YGPPGTGKTLMAR + A ++NGP+I+ K GESE+N
Sbjct: 247 PQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFF-FLINGPEIMSKMAGESESN 305
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV 356
+R+ F EE EK A II DEID+I R G V VV+QLL+ +DG+
Sbjct: 306 LRKAF---EEAEKNSPA-----IIFIDEIDSIAPKREKTNGE--VERRVVSQLLTLMDGM 355
Query: 357 DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIA 416
+N++V+ TNR + ID AL R GR + ++++G+PD GR++IL IHTK M K+A
Sbjct: 356 KARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNM----KLA 411
Query: 417 EDVDSMELATLTKNFSGAELEGLV-RAAQSTAMNRLIKAS-SKVEVDPEAMEKLMVERTD 474
+DVD ++A T + G++L L AA ++ + E+D E ++ L V +
Sbjct: 412 DDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDN 471
Query: 475 FLHALENDIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLV-- 532
F AL + A + + + I + E Q+ + A G+
Sbjct: 472 FRFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPS 531
Query: 533 -SVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VL GPP +GKT LA +A F+ V PE
Sbjct: 532 KGVLFFGPPGTGKTLLAKAIANECSANFISVKGPE 566
Score = 167 bits (406), Expect = 6e-42
Identities = 100/245 (40%), Positives = 141/245 (57%), Gaps = 14/245 (5%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGGL+ E R V E + G KG+L +GPPGTGKTL+A+ I +A
Sbjct: 499 IGGLE-EVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSA 557
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
V GP++L + GESE+N+R +F ++ R A ++ DE+D+I KARG+
Sbjct: 558 NFIS-VKGPELLSMWFGESESNVRDIF-----DKARAAAPC---VVFLDELDSIAKARGA 608
Query: 335 VGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPD 394
G++G D VVNQLL+++DGV+ N+ VIG TNR D ID AL+RPGRL+ + + LPD
Sbjct: 609 SAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPD 668
Query: 395 EKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKA 454
E+ R IL + + +AEDVD +A T FSGA+LE +V+ A A+ I+
Sbjct: 669 EEARFSILQTQLR----HTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEE 724
Query: 455 SSKVE 459
K E
Sbjct: 725 DIKRE 729
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDM 568
+L+ GPP +GKT +A +A + F + PE M
Sbjct: 261 ILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM 295
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 149 bits (362), Expect = 1e-36
Identities = 96/243 (39%), Positives = 138/243 (56%), Gaps = 16/243 (6%)
Query: 202 SIINPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGK 261
SI +P D G+GGL+ + + R + PE+ ++G K KG+LLYGPPGTGK
Sbjct: 122 SIEDPG-DISFAGVGGLNEQIREL-REVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGK 179
Query: 262 TLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIII 321
TL+AR + L K+V+ I+DKY+GES IR +F A+E E C +I
Sbjct: 180 TLLARAVAASLGVNFLKVVSSA-IVDKYIGESARIIREMFGYAKEHEP-C-------VIF 230
Query: 322 FDEIDAICKARGSVGGNTGVH-DTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLR 380
DEIDAI R S G + + +LL+++DG D L +I TNR D +D ALLR
Sbjct: 231 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLR 290
Query: 381 PGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLV 440
PGRL+ ++EI LP+E GR++IL IH +++ + ++D L LT +GA+L +V
Sbjct: 291 PGRLDRKIEIPLPNEVGRMEILKIHLEKVSK----QGEIDYEALVKLTDGTNGADLRNVV 346
Query: 441 RAA 443
A
Sbjct: 347 TEA 349
Score = 31.1 bits (67), Expect = 0.69
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCS 564
VLL GPP +GKT LA +A F+KV S
Sbjct: 169 VLLYGPPGTGKTLLARAVAASLGVNFLKVVS 199
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 147 bits (356), Expect = 7e-36
Identities = 95/254 (37%), Positives = 143/254 (56%), Gaps = 18/254 (7%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
PE+ + +G G+LL+GPPG GKTL+A+ + A I GP++L+KYVGESE
Sbjct: 515 PELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISI-RGPELLNKYVGESERA 573
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV 356
+R++F A C +I FDE+DA+ R + VVN LL+++DG+
Sbjct: 574 VRQVFLRARASSP-C-------VIFFDELDAMVPRRDD--SLSEASSRVVNTLLTELDGL 623
Query: 357 DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIA 416
+ + VI TNR D+ID A+LRPGRL+ + + LPD RV+IL TK+ ++++
Sbjct: 624 SDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEV- 682
Query: 417 EDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLI---KASSKVEV-DPEAMEKLMVER 472
++D + NFSGA+L LVR A TA+ + AS++ E+ A+E + V
Sbjct: 683 -NLDVLGRDERCSNFSGADLAALVREAAVTALRSAVFADIASNEPEITQHSALEPIRVTN 741
Query: 473 TDFLHALENDIKPA 486
DF A +N IKP+
Sbjct: 742 ADFELAFKN-IKPS 754
Score = 109 bits (262), Expect = 2e-24
Identities = 83/265 (31%), Positives = 129/265 (48%), Gaps = 22/265 (8%)
Query: 197 KQPRQSIINPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGP 256
+Q ++ P D IGGLD+ N + A + PEV + G +G+LL+GP
Sbjct: 158 RQKAEANREPPSDISLSDIGGLDDCINELLELV-AMPIKHPEVYQYTGIHPPRGVLLHGP 216
Query: 257 PGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEANIRRLFADAEEEEKRCGANS 315
PG GKT++A + L P I ++ P I+ GESE +R +F +A+ C
Sbjct: 217 PGCGKTMLANALANELGV--PFISISAPSIVSGMSGESEKKVREVFEEAKSLAP-C---- 269
Query: 316 GLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNN----ILVIGMTNRR 371
++ DEIDA+ R S + +V Q L+ +D + +LVIG TNR
Sbjct: 270 ---LMFIDEIDAVTPKRESA--QREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRP 324
Query: 372 DMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNF 431
D +D AL R GR + ++ + +P + R +IL K + K++ D D +LA T +
Sbjct: 325 DSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGL----KLSGDFDFRQLAKQTPGY 380
Query: 432 SGAELEGLVRAAQSTAMNRLIKASS 456
GA+L+ L AA A+ R+ S
Sbjct: 381 VGADLKALTAAAGIIAIKRIFNEIS 405
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYKT 589
VLL GPP GKT LA LA PF+ + +P + G + ++ ++R+V E+ K+
Sbjct: 211 VLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESE-KKVREVFEEAKS 265
Score = 36.3 bits (80), Expect = 0.018
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 15/116 (12%)
Query: 460 VDPEAMEKLMVERTDFLHALENDIKPAFGTSAEALEHFLARGIVNWGS--PVSSIFEDGQ 517
+ PE +E L + DF+ AL ++P+ E F V+W + + SI + Q
Sbjct: 452 LSPEELEPLAICPQDFIEALAK-VQPS-----SKREGFATVPGVSWNNIGALKSIRVELQ 505
Query: 518 LYIQQA-------RATEASGLVSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
+ I Q ++ S VLL GPP GKT LA +A S F+ + PE
Sbjct: 506 MAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPE 561
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 146 bits (354), Expect = 1e-35
Identities = 100/268 (37%), Positives = 149/268 (55%), Gaps = 24/268 (8%)
Query: 187 SLNLIGKAKGKQPRQSIINPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCK 246
S+N I K K ++ +WD IGGL+ E + R + PE+ Q G K
Sbjct: 634 SINRIRKEKSNTIF-TVPKVNWD----DIGGLE-EAKTVLRDTLQLPLQFPELFSQ-GLK 686
Query: 247 HVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEE 306
G+LLYGPPGTGKTL+A+ + L+ E + GP++L+ YVGESEAN+R +F A
Sbjct: 687 PRSGVLLYGPPGTGKTLLAKAVATELSL-EFVSIKGPELLNMYVGESEANVRNVFEKAR- 744
Query: 307 EEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNN--ILV 364
NS +I FDE+D+I RG+ + V D VV+QLL+++D + + NN + V
Sbjct: 745 -------NSSPCVIFFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFV 797
Query: 365 IGMTNRRDMIDEALLRPGRLEVQMEIGL-PDEKGRVQILNIHTKRMREYKKIAEDVDSME 423
IG TNR D++D +LLRPGR + + +G+ E+ + +L TK K+ E +D E
Sbjct: 798 IGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTF----KLDETIDLNE 853
Query: 424 LA-TLTKNFSGAELEGLVRAAQSTAMNR 450
+A NF+GA++ L A +A+ R
Sbjct: 854 IAKNCHPNFTGADMYALCSDAVLSAIKR 881
Score = 38.7 bits (86), Expect = 0.003
Identities = 79/344 (22%), Positives = 132/344 (38%), Gaps = 36/344 (10%)
Query: 252 LLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRC 311
LL+G P TGKT ++ + +A ++ + D EA + +
Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSA-PVFTISSYEFADATADHLEAKLDMFVQNV------- 477
Query: 312 GANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQ-LNNILVIGMTNR 370
S II ++D + + S GN + LLSKID V +VIG +
Sbjct: 478 -VKSPCAIIFVKDLDVL--SISSDEGNIVPGSKSIQILLSKIDLVKSPQGRYIVIGTCHS 534
Query: 371 RDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKN 430
+ I +L E++ DE R+++L I+ + K+I+ ++A T +
Sbjct: 535 IEKIPYEILSESFFELKFSELEMDE--RLELLKIYANNVIIDKRIS----LKDVALKTNS 588
Query: 431 FSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVERTDFLHALENDIKPAFGTS 490
S ELE L A++R+ + + D + ++ D ++ K T
Sbjct: 589 MSFGELECLPDHMTKAAVDRIKRTG--YDNDSIILSGPIITEQDVDVSINRIRKEKSNTI 646
Query: 491 AEALEHFLARGIVNWGS-----PVSSIFEDGQLYIQQARATEASGLV---SVLLEGPPNS 542
+ VNW ++ D Q + GL VLL GPP +
Sbjct: 647 FTVPK-------VNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQGLKPRSGVLLYGPPGT 699
Query: 543 GKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREK 586
GKT LA +A FV + PE + + ++ +R V EK
Sbjct: 700 GKTLLAKAVATELSLEFVSIKGPELLNMYVGESEA-NVRNVFEK 742
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 144 bits (350), Expect = 4e-35
Identities = 89/277 (32%), Positives = 150/277 (54%), Gaps = 25/277 (9%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGLDN N + ++P E+ ++ + +G+L +GPPGTGKTLMAR + ++
Sbjct: 268 VGGLDNYINQLKEMVMLPLLYP-EIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSS 326
Query: 275 REPKIV----NGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICK 330
K+ G L K+VGE+E +R LF +A+ + II FDEID +
Sbjct: 327 ENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPS--------IIFFDEIDGLAP 378
Query: 331 ARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
R S +H ++V+ LL+ +DG++ +++IG TNR D +D AL RPGR + +
Sbjct: 379 VRSSK--QEQIHASIVSTLLALMDGMESRGQVIIIGATNRPDAVDPALRRPGRFDREFYF 436
Query: 391 GLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNR 450
LPD R +I+ IHT+ + E + SM LA +K + GA+L L A ++ R
Sbjct: 437 PLPDRDARKKIIEIHTRNWD--PPVPEWLCSM-LAEKSKGYGGADLRALCTEAALNSIKR 493
Query: 451 ----LIKASSKVEVDPEAMEKLMVERTDFLHALENDI 483
L +++ ++++DP+ ++ V+ DF+ +++ I
Sbjct: 494 TYPQLYRSTKRLQIDPKTIK---VKVKDFVMSMKRMI 527
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 144 bits (349), Expect = 5e-35
Identities = 94/240 (39%), Positives = 134/240 (55%), Gaps = 19/240 (7%)
Query: 206 PDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMA 265
PD +G +GG + + R + PE +LG KGI+LYGPPGTGKTL A
Sbjct: 174 PDVTYGD--VGGCKEQIERL-REVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCA 230
Query: 266 RQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEI 325
R + +A +++ G +++ KYVGE +R LF A + K C II FDEI
Sbjct: 231 RAVANRTDATFIRVI-GSELVQKYVGEGARMVRELFEMARTK-KAC-------IIFFDEI 281
Query: 326 DAICKAR--GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGR 383
DAI AR GG+ V T++ +L++++DG D NI V+ TNR + +DEAL+RPGR
Sbjct: 282 DAIGGARFDDGAGGDNEVQRTML-ELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGR 340
Query: 384 LEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAA 443
++ ++E GLPD +GR IL IH K M I +D+ +A L + +GAEL + A
Sbjct: 341 IDRKVEFGLPDLEGRAHILRIHAKSM----AIDKDIRWELIARLCPSQTGAELRSVCTEA 396
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
++L GPP +GKT A +A +D F++V E
Sbjct: 216 IMLYGPPGTGKTLCARAVANRTDATFIRVIGSE 248
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 144 bits (349), Expect = 5e-35
Identities = 87/217 (40%), Positives = 125/217 (57%), Gaps = 17/217 (7%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANI 297
E +LG + KG+LLYGPPG KT+ A+ I V GP++ DK+VGESE +
Sbjct: 572 ETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIA-VKGPELFDKFVGESERAV 630
Query: 298 RRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVD 357
R++F A + +I FDEIDA+ RG + D VV LL+++DG++
Sbjct: 631 RQVFQKARQASPS--------VIFFDEIDALTANRGEDNSS----DRVVAALLNELDGIE 678
Query: 358 QLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAE 417
L N+LV+ TNR DMID AL+RPGRL+ + +G P+ + R QI+ I ++M K AE
Sbjct: 679 ALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKM----KFAE 734
Query: 418 DVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKA 454
DVD +A T+ SGAE+ L + A AM+ ++A
Sbjct: 735 DVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLEA 771
Score = 138 bits (333), Expect = 4e-33
Identities = 116/399 (29%), Positives = 179/399 (44%), Gaps = 28/399 (7%)
Query: 195 KGKQPRQSIINPDWDFGKMGIGGLDNEFNAIFRRAFASRVFP-PEVVEQLGCKHVKGILL 253
+G + Q+ P IGGL + I R F PE+ + +G+LL
Sbjct: 261 QGSEETQNFDGPPSAVTFSSIGGLQAQIAQI--RDIVELPFQNPELFKFFNIMPPRGVLL 318
Query: 254 YGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGA 313
YGPPGTGKT++ R + NA + ++GP ++ KY+GE+E+ +R++F DA +
Sbjct: 319 YGPPGTGKTMVMRAVAAEANA-QVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPS--- 374
Query: 314 NSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDM 373
II DEIDA+ R + V LL+ +DG+ ++VI TNR +
Sbjct: 375 -----IIFIDEIDALAPKRTE--DVSEAESRAVATLLTLLDGMANAGKVVVIAATNRPNS 427
Query: 374 IDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSG 433
IDEAL RPGRLE ++EIG+PD+ R+ I+ + + D +LA+ T + G
Sbjct: 428 IDEALRRPGRLEKEIEIGIPDKSARLDIIKL---LLSGVPNEINDAQLEDLASRTHAYVG 484
Query: 434 AELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKL-MVERTDFLHALENDIKPAFGTSAE 492
A+L +VR A A+ R I ++ D ++ V+ D AL + + A
Sbjct: 485 ADLAAVVREAALRAIKRTI----SLQKDTSGLDIFGAVQMDDLEFALSSVRQSAMREFMM 540
Query: 493 ALEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGL---VSVLLEGPPNSGKTALAA 549
+ I + E + + G+ VLL GPP KT A
Sbjct: 541 ESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAK 600
Query: 550 QLAKLSDFPFVKVCSPE---DMVGFTETAKCLQIRKVRE 585
+A + F+ V PE VG +E A +K R+
Sbjct: 601 AIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQ 639
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 142 bits (343), Expect = 3e-34
Identities = 86/236 (36%), Positives = 128/236 (54%), Gaps = 16/236 (6%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGL+ + I + V PE+ E LG KGILLYGPPGTGKTL+AR + +
Sbjct: 147 VGGLEKQIKEI-KEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDC 205
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
+ + V+G +++ KY+GE +R LF A E II DEID+I +R
Sbjct: 206 KFIR-VSGSELVQKYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSIGSSRSD 256
Query: 335 VGGNTGVHDT--VVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
G +G + + +LL+++DG + NI VI TNR D++D ALLRPGR++ ++E
Sbjct: 257 SSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPP 316
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAM 448
P + R +IL IH++ M + +D +A SGAEL+G+ A A+
Sbjct: 317 PSAEARAEILRIHSRSM----NLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFAL 368
Score = 34.3 bits (75), Expect = 0.075
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 4/112 (3%)
Query: 459 EVDPEAMEKLMVERTDFLHALENDIKPAFGTS-AEALEHFLARGIVNWGSPVSSIFEDGQ 517
E+ P L + + L N + P E + + + I E +
Sbjct: 103 EIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIE 162
Query: 518 LYIQQARATEASGLVS---VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
L ++ E+ G+ +LL GPP +GKT LA +A +D F++V E
Sbjct: 163 LPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSE 214
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 136 bits (329), Expect = 1e-32
Identities = 95/262 (36%), Positives = 140/262 (53%), Gaps = 23/262 (8%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+ G+D I F + P+ E+LG K +G +L GPPGTGKTL+A+ N
Sbjct: 298 VAGVDEAKEEIME--FVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANV 355
Query: 275 REPKI-VNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARG 333
P + V+G + L+ +VG + +R LFA A + C II DEIDAI KARG
Sbjct: 356 --PFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAP-C-------IIFIDEIDAIGKARG 405
Query: 334 SVG--GNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
G G+ ++ +NQLL ++DG +I+V TNR D++D ALLRPGR + Q+ I
Sbjct: 406 RGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITID 465
Query: 392 LPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAEL-----EGLVRAAQST 446
PD GR QI +H K ++ I D+ + LA LT F+GA++ EG + AA+S
Sbjct: 466 RPDIGGREQIFKVHLKHIKAADNI--DLIAKRLAVLTSGFTGADIMNVCNEGALIAARSN 523
Query: 447 AMN-RLIKASSKVEVDPEAMEK 467
+ +++ +E +EK
Sbjct: 524 SNEVQMVHFEQAIERVTAGLEK 545
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
+L GPP +GKT LA A ++ PF+ V E
Sbjct: 333 ILSGPPGTGKTLLAKATAGEANVPFLSVSGSE 364
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 136 bits (329), Expect = 1e-32
Identities = 89/248 (35%), Positives = 135/248 (54%), Gaps = 16/248 (6%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
I G+ A+ R S V + +Q + GILL+G PG GKT +A I
Sbjct: 608 IAGMQEAKEAV-RDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFPV 666
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
+ I GP++LDKY+G+SE +R LF+ A+ K C ++ FDE D++ RG
Sbjct: 667 QFISI-KGPELLDKYIGKSEQGVRDLFSRAQMA-KPC-------VLFFDEFDSVAPRRGQ 717
Query: 335 VGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPD 394
+TGV D VVNQ+L+++DG + L+ + ++ T R DMID ALLRPGRL+ + LP+
Sbjct: 718 --DSTGVTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPN 775
Query: 395 EKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKA 454
E+ R+++L R I +L+TLT ++ A+L L+ A A+++L+K
Sbjct: 776 EEERLEVLQKLANRFH----IENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLKR 831
Query: 455 SSKVEVDP 462
S VDP
Sbjct: 832 VSINAVDP 839
Score = 28.7 bits (61), Expect = 3.7
Identities = 59/253 (23%), Positives = 97/253 (38%), Gaps = 20/253 (7%)
Query: 319 IIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEAL 378
II D++ + + G V + + L +I + + I+ IG E L
Sbjct: 438 IIYLDDVHCLISSSNENGELGFVEEREIAFLQHQIINLKRKRKIIFIGFGEEFLTFSENL 497
Query: 379 LRPGRLEVQMEIGLPD--EKGRVQILNIHTKRMREYKKIAEDVDSMELATL-TKNFSGAE 435
+ P L Q++I LP R +IL T + I +DS+E ++ T+ + +
Sbjct: 498 VLP--LLFQIKIALPSLAVTRRKEILT--TIFQENFSDIT--MDSIEFISVKTEGYLMTD 551
Query: 436 LEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVERT--DFLHALENDIKPAFGTSAEA 493
L V+ S A I+ K M K ++E+T DF+ K F S+
Sbjct: 552 LVLFVKRLLSEAFVEKIQNGPK-----HLMNKGLIEKTLKDFVPLQLRKAK--FVKSS-- 602
Query: 494 LEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLVSVLLEGPPNSGKTALAAQLAK 553
+ G+ V I E Y + +LL G P GKT LA+ ++
Sbjct: 603 IRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISS 662
Query: 554 LSDFPFVKVCSPE 566
F+ + PE
Sbjct: 663 TFPVQFISIKGPE 675
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 129 bits (312), Expect = 1e-30
Identities = 84/237 (35%), Positives = 132/237 (55%), Gaps = 18/237 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGGL+++ I + A + PE+ E++G K KG++LYG PGTGKTL+A+ + +A
Sbjct: 193 IGGLESQIQEI-KEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSA 251
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
++V G +++ KY+G+ +R+LF AEE I+ DEIDAI R
Sbjct: 252 TFLRVV-GSELIQKYLGDGPRLVRQLFNAAEEHSP--------SIVFIDEIDAIGTKRYD 302
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVD-QLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
G + T++ +LL+++DG D +I VI TNR +D AL+RPGR++ ++
Sbjct: 303 AQSGAEREIQRTML-ELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFE 361
Query: 392 LPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAM 448
PDE + +I IHT +M + EDV+ EL + SGAE++ +V A A+
Sbjct: 362 NPDEATKRKIFTIHTSKM----NLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLAL 414
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 507 SPVSSIFEDGQLYIQQARATEASGLV---SVLLEGPPNSGKTALAAQLAKLSDFPFVKVC 563
S + I E +L + E G+ V+L G P +GKT LA +A + F++V
Sbjct: 198 SQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVV 257
Query: 564 SPE 566
E
Sbjct: 258 GSE 260
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 128 bits (310), Expect = 2e-30
Identities = 85/238 (35%), Positives = 130/238 (54%), Gaps = 17/238 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGGL + +F A + + +LG K KG L++GPPGTGKTL+AR NA
Sbjct: 187 IGGLSKQIEELFE-AIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNA 245
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
K+ PQ++ ++G+ +R FA A+E+ II DE+DAI R
Sbjct: 246 TFLKLA-APQLVQMFIGDGAKLVRDAFALAKEKSPA--------IIFIDELDAIGTKRFD 296
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
G+ V T++ +LL+++DG + + VI TNR D +D ALLR GRL+ ++E L
Sbjct: 297 SEKAGDREVQRTML-ELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPL 355
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNR 450
P+E+ RV IL IH+++M I +D++ ELA T ++GA L+ + A A+ +
Sbjct: 356 PNEEARVGILRIHSRKM----AIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQ 409
Score = 34.3 bits (75), Expect = 0.075
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 509 VSSIFEDGQLYIQQARATEASGLV---SVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSP 565
+ +FE L +QQA G+ L+ GPP +GKT LA A S+ F+K+ +P
Sbjct: 194 IEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAP 253
Query: 566 E 566
+
Sbjct: 254 Q 254
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 127 bits (307), Expect = 6e-30
Identities = 94/274 (34%), Positives = 143/274 (52%), Gaps = 25/274 (9%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGGL++ + ++P EV L +G+L +GPPGTGKTLMAR + +
Sbjct: 374 IGGLEDIILQLKEMVMLPLLYP-EVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCST 432
Query: 275 REPKIV----NGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICK 330
+ KI G L K+VGE+E +R LF EE +R + II FDEID +
Sbjct: 433 KNQKISFFLRKGSDCLSKWVGEAERQLRLLF----EEARRVQPS----IIFFDEIDGLAP 484
Query: 331 ARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
R S T H ++V+ LL+ +DG+D ++VIG TNR + +D AL RPGR + +
Sbjct: 485 IRSSKQEQT--HSSIVSTLLALMDGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYF 542
Query: 391 GLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNR 450
LP+++ R++IL I++ + KI E + LA T + GA+L+ L A A+ R
Sbjct: 543 PLPNKQARMKILEINS--LHFSPKIPESY-LLHLAESTSGYGGADLKALCTEAALNAVRR 599
Query: 451 ----LIKASSKVEVDPEAMEKLMVERTDFLHALE 480
+ +S K +D + ++ V DF+ A E
Sbjct: 600 TFPQIYTSSDKFLID---LNEISVSICDFVVASE 630
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 114 bits (275), Expect = 4e-26
Identities = 96/315 (30%), Positives = 154/315 (48%), Gaps = 29/315 (9%)
Query: 148 LEAVD----VVALAAGANAVPRRVR-MGR--LLPDASVQFDKAENSSLNLIGKAKGKQPR 200
LEA+D +V G+N V R + + R L P ASV + N+ ++++
Sbjct: 62 LEAIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSI- 120
Query: 201 QSIINPDW--DFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPG 258
S++ PD D +GGLD + + R A + ++ Q+G +G+LLYGPPG
Sbjct: 121 -SMLRPDERPDVSYADVGGLDVQKQEV-REAVELPLTQGDLYRQIGIDPPRGVLLYGPPG 178
Query: 259 TGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLH 318
TGKT++ + + A ++V G + + KY+GE +R +F A E
Sbjct: 179 TGKTMLVKAVANSTAANFIRVV-GSEFVQKYLGEGPRMVRDVFRMARENAPA-------- 229
Query: 319 IIIFDEIDAICKAR--GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDE 376
II DEIDAI R G + V ++ +LL+++DG DQ N+ VI TNR D +D
Sbjct: 230 IIFIDEIDAIATKRFDAQTGADREVQRILI-ELLTQMDGFDQGANVKVIMATNRADTLDP 288
Query: 377 ALLRPGRLEVQMEI-GLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAE 435
ALLRPGRL+ ++E D + R + T +M ++ +VD SGA+
Sbjct: 289 ALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKM----LLSPEVDLDTFIMRPDASSGAQ 344
Query: 436 LEGLVRAAQSTAMNR 450
+ +++ A A+ +
Sbjct: 345 IAAIMQDAGLLAVRK 359
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VLL GPP +GKT L +A + F++V E
Sbjct: 171 VLLYGPPGTGKTMLVKAVANSTAANFIRVVGSE 203
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 114 bits (274), Expect = 6e-26
Identities = 88/263 (33%), Positives = 129/263 (49%), Gaps = 20/263 (7%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
P +LG K +G+LL GPPGTGKT++AR + N ++G Q + YVG
Sbjct: 289 PTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPF-FFMSGSQFDEMYVGVGAKR 347
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV 356
+R LFA A ++ II DE+DAI + R + + T+ NQLL +DG
Sbjct: 348 VRELFAAARKQAPS--------IIFIDELDAIGQKRNARDA-AHMRQTL-NQLLVDLDGF 397
Query: 357 ----DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREY 412
D + ++ IG TN + +D AL RPGR + + + LPD +GR+ IL HT+ +
Sbjct: 398 SKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHV--- 454
Query: 413 KKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLM-VE 471
+ +DVD +A T F+GA+L L+ A A L A S +++ LM E
Sbjct: 455 -PLGKDVDLSIIARGTSGFAGADLANLINQAAVYASKNLSTAVSMRDLEWSKDRILMGAE 513
Query: 472 RTDFLHALENDIKPAFGTSAEAL 494
R EN + A+ AL
Sbjct: 514 RKSAFITPENKLMTAYHEGGHAL 536
Score = 31.1 bits (67), Expect = 0.69
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPF 559
VLL GPP +GKT LA +A ++ PF
Sbjct: 303 VLLTGPPGTGKTMLARAVAGEANVPF 328
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 90.6 bits (215), Expect = 8e-19
Identities = 76/267 (28%), Positives = 131/267 (49%), Gaps = 23/267 (8%)
Query: 205 NPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLM 264
N WD I GL+N A+ + + P++ G K GILLYGPPGTGK+ +
Sbjct: 125 NVRWD----DIAGLENAKEAL-KETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYL 178
Query: 265 ARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDE 324
A+ + + I + ++ K++GESE +R+LF A E++ II DE
Sbjct: 179 AKAVATEAGSTFFSI-SSSDLVSKWMGESERLVRQLFEMAREQKP--------SIIFIDE 229
Query: 325 IDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQ-LNNILVIGMTNRRDMIDEALLRPGR 383
ID++C +R G + + + L +++GV + + +LV+G TN +D A+ R R
Sbjct: 230 IDSLCGSRSE--GESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--R 285
Query: 384 LEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAA 443
E ++ I LP+ R ++ ++ ++ D ELA +T +SG+++ +VR A
Sbjct: 286 FEKRIYIPLPNAHARARMFELNVGKI---PSELTSQDFKELAKMTDGYSGSDISIVVRDA 342
Query: 444 QSTAMNRLIKASSKVEVDPEAMEKLMV 470
+ R+ A+ EV + +V
Sbjct: 343 IMEPVRRIHTATHFKEVYDNKSNRTLV 369
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 82.2 bits (194), Expect = 3e-16
Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 21/254 (8%)
Query: 201 QSIINPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLG--CKHVKGILLYGPPG 258
Q ++ + D IGG+D N + + +P EV + G KG+LLYGPPG
Sbjct: 77 QLVLPSEIDVSFDDIGGMDEHVNQLLQDVLFPLKYP-EVFDTHGGLLSCPKGLLLYGPPG 135
Query: 259 TGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLH 318
GKT++A+ + K A + G + DK+ GES + LF A + E
Sbjct: 136 CGKTMLAKALAKQSQATFINVSVG-LLTDKWFGESNKLVDALFTLARKLEPT-------- 186
Query: 319 IIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDG-VDQLNNILVIGMTNRRDMIDEA 377
II DEID + R + + +S DG + + +LV+G TNR IDEA
Sbjct: 187 IIFIDEIDTFLRQRQRTDHEAMAQ--IKAEFMSMWDGLLSGQSRVLVLGATNRPADIDEA 244
Query: 378 LLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELE 437
+ R R+ I LP+ + R +IL ++ K++ + + D + T SG+ ++
Sbjct: 245 IRR--RMPKVFSIPLPNAEQRRKILELYLKKV----PLEANFDWNGVVNATAGLSGSYIK 298
Query: 438 GLVRAAQSTAMNRL 451
+ R+A S L
Sbjct: 299 EVCRSALSVPRREL 312
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKV 562
+LL GPP GKT LA LAK S F+ V
Sbjct: 128 LLLYGPPGCGKTMLAKALAKQSQATFINV 156
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 78.6 bits (185), Expect = 3e-15
Identities = 72/246 (29%), Positives = 117/246 (47%), Gaps = 25/246 (10%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
I GLD+ N++ + A PE+ + L + V+G+LL+GPPGTGKT++AR + A
Sbjct: 381 IAGLDDAKNSL-KEAVIYPFLRPELFQGLR-EPVQGMLLFGPPGTGKTMLARAVATEAKA 438
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
I + + KY+G+SE +R LF A+ + C +I DEID+I AR
Sbjct: 439 TFFSI-SASSLTSKYLGDSEKLVRALFEVAKRQ--TCS------VIFVDEIDSILSARND 489
Query: 335 VGGNTGVHDTVVNQLLSKIDGVDQL---------NNILVIGMTNRRDMIDEALLRPGRLE 385
G + + L + + +LV+ TN IDEA R R
Sbjct: 490 SGNEHESSRRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARR--RFV 547
Query: 386 VQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQS 445
+ I LP+++ R + L+ H + + ED++ EL LT+ +SG+++ L + A
Sbjct: 548 KRTYIPLPEKETRYKHLS-HLLHNQVHCLTEEDLE--ELVNLTEGYSGSDITALAKDAAM 604
Query: 446 TAMNRL 451
+ L
Sbjct: 605 GPLRNL 610
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 68.5 bits (160), Expect = 4e-12
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEANIRRLFADAEEE 307
+G+LL+GPPGTGKT++AR + +R ++ + K++GESE +R LF A++
Sbjct: 493 RGMLLFGPPGTGKTMLARAVA--TESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKL 550
Query: 308 EKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQL-------- 359
II DEID++ AR S G + + L + + +
Sbjct: 551 SP--------SIIFVDEIDSLLSARSSDGNEHETSRRIKTEFLIQWSSLARAAASRQTAD 602
Query: 360 -NNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAED 418
+LV+ TN ID+A R R + I LPDE R +H + +Y+K +
Sbjct: 603 HPRVLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTR----RLHLNNLLKYQKHSLS 656
Query: 419 VDSME-LATLTKNFSGAELEGLVRAA 443
++ +E + T+ +SG++L L + A
Sbjct: 657 LEDIEAIVKATEYYSGSDLTALAKDA 682
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 59.3 bits (137), Expect = 2e-09
Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 24/230 (10%)
Query: 244 GCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFAD 303
G + +G LLYGPPG+GKT + L+ + ++N + +K G ++ + L ++
Sbjct: 238 GIPYRRGYLLYGPPGSGKTSFLYALAGELDY-DICVLN---LAEK--GLTDDRLNHLLSN 291
Query: 304 AEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVV-NQLLSKIDGVDQLNNI 362
+ +++ +++D+ + R G G H V + LL+ +DGV +
Sbjct: 292 VPPKA----------VVLLEDVDSAFQGRER-SGEVGFHANVTFSGLLNALDGVTSSDER 340
Query: 363 LVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSM 422
++ TN + +D AL+RPGR++V+ +G + Q+ + T+ ++A+D+ +
Sbjct: 341 IIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPE---QVREMFTRFYGHSPEMADDLSDI 397
Query: 423 ELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVER 472
KN S A L+GL +S+ + + A + P V R
Sbjct: 398 ---VCPKNTSMASLQGLFVMNKSSPADAVDMAKELPDNPPSTPFSFNVHR 444
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 34.3 bits (75), Expect = 0.075
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 533 SVLLEGPPNSGKTALAAQLAKL--SDFPFVKVCSPE 566
++L+ GPP++GKTA+A +A+ SD PFV + + E
Sbjct: 67 AILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASE 102
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEANIRRL 300
+ IL+ GPP TGKT +A + + L + P + ++ ++ + ++EA ++ L
Sbjct: 66 RAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEALLQAL 118
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 33.5 bits (73), Expect = 0.13
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Query: 744 TENVTSRTDNLAMSPSFSEMADSGRYTEEASSSHIDIVAMSYEDALLSNSFDVINLEELP 803
+E+ +S DN + S S ++S ++SSS D + S + S+S + E
Sbjct: 117 SESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEG--SDSSSSSSSSESE 174
Query: 804 AATRSYDSDSSLK-PETPRLLEYIDSNSDSSDTETCD----LDSRTHPLTPLNFILSDDD 858
+++ DS SS E+ E DS+S SSD+E+ DS + + + S+D+
Sbjct: 175 SSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDN 234
Query: 859 HTVCDSSDLQYDS 871
+ SSD + +S
Sbjct: 235 DSSSSSSDSESES 247
Score = 31.5 bits (68), Expect = 0.53
Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query: 748 TSRTDNLAMSPSFSEMADSGRYTEEASSSHIDIVAMSYEDALLSNSFDVINLEELPAATR 807
+S + + S S SE S + +SSS S ED+ S+S E +
Sbjct: 158 SSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSD 217
Query: 808 SYDSDSSLKPETPRLLEYIDSNSDSSDTETC--DLDSRTHPLTPLNFILSDDDHTVCDSS 865
S S SS + E+ S+S S++E+ D DS + + S D + +SS
Sbjct: 218 SSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSS 277
Query: 866 DLQYDSFVD 874
D + DS D
Sbjct: 278 DSEDDSSSD 286
Score = 31.1 bits (67), Expect = 0.69
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Query: 759 SFSEMADSGRYTEEASSSHIDIVAMSYEDALLSNSFDVINLEELPAATRSYDSDSSLKPE 818
S SE + SG ++E+ SS + + S ++ S+S D E ++ S S SS E
Sbjct: 98 SSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDS---ESESSSEDSDSSSSSSDSE 154
Query: 819 TPRLLEYIDSNSDSSDTETC----DLDSRTHPLTPLNFILSDDDHTVCDSSDLQYDS 871
+ E DS+S SS +E+ D DS + + S+D + SSD + +S
Sbjct: 155 SESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESES 211
Score = 27.5 bits (58), Expect = 8.6
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 11/132 (8%)
Query: 748 TSRTDNLAMSPSFSEMADSGRYTEEASSSHIDIVAMSYEDALLSNSFDVINLEELPAATR 807
+S + + S S SE S ++ +SSS S ED S+S + + +
Sbjct: 194 SSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSS-----DSESESS 248
Query: 808 SYDSDSSLK---PETPRLLEYIDSNSDSSDTETCDLDSRTHPLTPLNFILSDDDHTVCDS 864
S DSDSS E+ + DS+S+SSD+E DS + + S+D + S
Sbjct: 249 SEDSDSSSSSSDSESESSSKDSDSSSNSSDSED---DSSSDSSDSESESSSEDSDSTSSS 305
Query: 865 SDLQYDSFVDMG 876
SD S + G
Sbjct: 306 SDSDSSSSSEDG 317
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 798 NLEELPAATRSYDSDSSLKPETPRLLEYIDSNSDSSD 834
NL E+ A ++ K E+ R LE+ DSNSDS D
Sbjct: 480 NLSEMAEAKEVEREETRPKGESARYLEHADSNSDSED 516
>SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit
Cdc21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 31.5 bits (68), Expect = 0.53
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 732 PTAPAHATLLVRTENVTSRTDNLAMSPSFSEMADSGRYTEEASSSHIDIVAMSYEDALLS 791
P + +T L T T+RT LA SP E + G ++S SH+ +S + L
Sbjct: 35 PASSPGSTRLT-TPRTTARTP-LASSPLLFESSSPGPNIPQSSRSHL----LSQRNDLFL 88
Query: 792 NSFDVINLEELPAATRSYDSDSSLKPETPRLLEYIDSNSDSSDTETCDLDSRTHPLT 848
+S + + P +TR D SS++ TP +D T + L S + LT
Sbjct: 89 DS----SSQRTPRSTRRGDIHSSVQMSTPSRRREVDPQRPGVSTPSSLLFSGSDALT 141
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 523 ARATEASGLVSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
ARA ++ + +L++GP +SGKT++ +AK + FV++ + E
Sbjct: 887 ARAC-STRMFPILIQGPTSSGKTSMIEYVAKKTGHKFVRINNHE 929
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 531 LVSVLLEGPPNSGKTALAAQLAKLSDFPFVKV 562
L +LLEG P GKT+L LA+ + V++
Sbjct: 1559 LKPILLEGSPGVGKTSLITALARETGHQLVRI 1590
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 31.1 bits (67), Expect = 0.69
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 9/128 (7%)
Query: 725 PEIVIPQPTAPAHATLLVRTENVTSRTDNLAMSPSFSEMADSGRYTEEASSSHIDIVAMS 784
P I P+P P + ++ V S+ L +SP + + + SSS I+ +A
Sbjct: 270 PPIPSPRPPQPVAVEAIQQSRAVISQQLPLHVSPRKPPKPPLRKVSTQRSSSPIENLATK 329
Query: 785 YEDALLSNSFDVINLEELPAATRSYDSDSSLKPETPRL---LEYIDSNSDSSDTETCDLD 841
+ +L V L+ P + S+ SL PE PRL + S S + +L
Sbjct: 330 SDASL------VTGLQSSPYTHIAPASEMSLIPEKPRLPPRPSHTLSELSSPALTSENLS 383
Query: 842 SRTHPLTP 849
S+ PL P
Sbjct: 384 SKPSPLFP 391
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 30.7 bits (66), Expect = 0.92
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEA---NIRRLFADA 304
KG+L G GTGKT +A I + L + P + G ++ + ++EA N RR
Sbjct: 65 KGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEVYSSEIKKTEALMENFRRAIGLR 124
Query: 305 EEEEK 309
+E K
Sbjct: 125 VKETK 129
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 30.7 bits (66), Expect = 0.92
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Query: 244 GCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEANIRRLFA 302
G K + L GPPG GKT + + I LN + V G + + G I +
Sbjct: 567 GTMQGKIMCLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAMPG 626
Query: 303 DAEEEEKRCGANSGLHIIIFDEIDAICKA 331
+ K+ + L I+ DEID + K+
Sbjct: 627 KIVQALKKVQTENPL--ILIDEIDKVGKS 653
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 30.7 bits (66), Expect = 0.92
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 11/109 (10%)
Query: 720 NKHEIPEIVIPQPTAPAHATLLVRTENVTSRTDNLAMSPSFSEMAD----------SGRY 769
N+ EIP++ + + +H+ V +N T+ TD A FS AD +
Sbjct: 88 NEPEIPDMQ-DEYSRDSHSQQSVEEQNNTTNTDEDASVNEFSVAADISDVNTLGKDNSES 146
Query: 770 TEEASSSHIDIVAMSYEDALLSNSFDVINLEELPAATRSYDSDSSLKPE 818
TEE + + + ED + F L+ P + R D +L PE
Sbjct: 147 TEEPVNEVNETATLGNEDVGERSGFPSEGLDNEPESQRDLDETGNLAPE 195
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 30.7 bits (66), Expect = 0.92
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 14/97 (14%)
Query: 249 KGILLYGPPGTGKTLMARQIGKM-------LNAREPKIVNGPQILDKYV-GESEANIRRL 300
K +LL GPPG GKT A + K+ LNA + + ++LD+ + G +++
Sbjct: 410 KAVLLSGPPGIGKTTAAHLVAKLEGYDVLELNASDTR---SKRLLDEQLFGVTDSQSLAG 466
Query: 301 FADAEEEEKRCGANSGLHIIIFDEIDAICKA-RGSVG 336
+ + A S L ++I DEID + RG VG
Sbjct: 467 YFGTKANPVDM-AKSRL-VLIMDEIDGMSSGDRGGVG 501
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 533 SVLLEGPPNSGKTALAAQLAKLSDFPFVKV 562
+VLL GPP GKT A +AKL + +++
Sbjct: 411 AVLLSGPPGIGKTTAAHLVAKLEGYDVLEL 440
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 720 NKHEIPEIVIPQPTAPAHATLLVRTENVTSRTDNLAMSPSFSEMADSGRYTEEASSSHID 779
+ H+ P IP A++ LL + +S T N ++P S + D +SSSH+D
Sbjct: 122 DSHDSPNNSIP---LMANSCLLSADNSSSSTTSNPNVAPPISTLPDPVATISSSSSSHLD 178
Query: 780 IVAM 783
+ A+
Sbjct: 179 MGAI 182
>SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 578
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 254 YGPPGTGKTLMARQIGKMLNAREPKIVNGPQILD-KYVGESEANIRRLFADAEEEE 308
Y PPGT +M RQ+ N + K P+ D V + EA LF + EEEE
Sbjct: 335 YNPPGTPVHVMGRQLE---NVFKEKWEARPKFDDATLVKQQEAETDALFDNGEEEE 387
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 246 KHVKGILLYGPPGTGKTLMARQIGK 270
+ + I++ G PGTGKT +A Q+ +
Sbjct: 6 RELPNIIICGTPGTGKTTLAEQVAE 30
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 252 LLYGPPGTGKTLMARQIGKMLNAREPKIV 280
L++GPPGTGKT +I + L R +I+
Sbjct: 229 LIHGPPGTGKTHTLVEIIQQLVLRNKRIL 257
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 243 LGCKHVKGILLYGPPGTGKT 262
+ V +L YGPPGTGKT
Sbjct: 51 ISSNRVPHMLFYGPPGTGKT 70
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.3 bits (60), Expect = 4.9
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 748 TSRTDNLAMSPSFSEMADSGRYTEEASSSHIDIVAMSYEDALLSNSFDVINLEELPAATR 807
++ N A S S + + + + A+SS I S SNS +++
Sbjct: 215 STAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSA 274
Query: 808 SYDSDSSLKPETPRLLEYIDSNS----DSSDTETCDLDSRT---HPLTPLNFILSDDDHT 860
Y++ S L TP +NS +S T ++S T TPL+ + S + T
Sbjct: 275 QYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTT 334
Query: 861 VCDSSDLQYDS 871
+S S
Sbjct: 335 ATSTSSTPLSS 345
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 745 ENVTSRTDNLAMSPSFSEMADSGRYTEEASSSHIDIVAMSYEDALLSNSFDVINLEELPA 804
EN + D+LA+ F + + YTE A D V + +D L+ S N + A
Sbjct: 140 ENFVEKADDLAVVAFFKDQKLNDTYTEVAEVMKDDFVFAASDDKELAKSLG-SNFPGIVA 198
Query: 805 ATRSYDSDS 813
T+ DS
Sbjct: 199 FTKDAAQDS 207
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 28.3 bits (60), Expect = 4.9
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query: 239 VVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIR 298
++EQ C ++L+G GTGKT +AR I +R +I + A+ R
Sbjct: 114 LIEQDRCN---SMILWGSAGTGKTTLARLIAVTTKSRFIEI--------SATSTTVADCR 162
Query: 299 RLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSV 335
++F D++ G + II DE+ +A+ +
Sbjct: 163 KIFEDSQNYLTLTGRKT---IIFLDEVHRFNRAQQDI 196
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 748 TSRTDNLAMSPSFSEMADSGRYTEEASSSHIDIVAMSYEDALL--SNSFDVINLEE 801
TS TD S+S +++S +T + S + +I + + ++ S+SFD N+ +
Sbjct: 415 TSNTDKSLRPSSYSAVSESSNFTHDVSRDNKEISLNAPKSIIVSQSDSFDTSNVTQ 470
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 6.5
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 751 TDNLAMSPSFSEMADSGRYTEEASSSHIDIVAMSY--EDALLSNSFDVINLEELPAATRS 808
T + SPS SE EAS+S+ +I++ + D+ ++NSF + + T S
Sbjct: 3796 TPSRMTSPSLSETIPQSSSISEASTSNPNILSSTVLSFDSTITNSFTTASTSIM--KTTS 3853
Query: 809 YDSDSSLKPETPRLLEYIDSNSDSSDTETCDLDSRTHPLTPLNFILSDDDHTVCDSSDLQ 868
+S+S + Y ++ S + + ++ +T F+ +D + T+ +Q
Sbjct: 3854 LNSNSYKWYNSTTQSVYYNATSSTVPWSNSTFRNTSNTMTS-RFVSNDFNSTISLQPVVQ 3912
Query: 869 YDSF 872
+++F
Sbjct: 3913 FNNF 3916
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 27.5 bits (58), Expect = 8.6
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKML---NAREPKIVNGPQILDKYVGES 293
P++ E L K I+ GPPG+ + +I + +AR P + LD+ +
Sbjct: 167 PKLPEMLSASSKK-IVFIGPPGSAMRSLGDKISSTIVAQSARVPCMSWSGNELDQVRIDE 225
Query: 294 EANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGG 337
E NI + D + +K C ++ I + ++I + S GG
Sbjct: 226 ETNI--VTVDDDVYQKACIRSAEEGIAVAEKIGYPVMIKASEGG 267
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 786 EDALLSNSFDVINLEELPAATRSYDSDSSLKPETPRLL---EYIDSNSDSSDTETCDL-D 841
ED + ++ + NLE PAA ++ + +++ E P L E I+ N +++ ET L D
Sbjct: 380 EDMQIKDAEEHSNLESTPAAQQTSEVEANNHQEKPSSLPAVEQINVNEENNTPETEGLED 439
Query: 842 SRTHPLTPLNFILSDDDHT 860
+ T +++ ++ T
Sbjct: 440 EKEENNTAAESLINQEETT 458
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 407 KRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQS--TAMNRLIKASSKVEVDPEA 464
K+ ++Y+KI EDV S++ + + S L G + + N+ + + E A
Sbjct: 219 KKEKDYEKIKEDVSSIKASLAEEQASNKSLRGEQERLEKLLVSSNKTVSTLRQTENSLRA 278
Query: 465 MEKLMVERTDFLHALENDIK 484
K + E+ + E D K
Sbjct: 279 ECKTLQEKLEKCAINEEDSK 298
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.133 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,796,045
Number of Sequences: 5004
Number of extensions: 159593
Number of successful extensions: 720
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 557
Number of HSP's gapped (non-prelim): 100
length of query: 878
length of database: 2,362,478
effective HSP length: 79
effective length of query: 799
effective length of database: 1,967,162
effective search space: 1571762438
effective search space used: 1571762438
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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