Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000447-TA|BGIBMGA000447-PA|IPR003960|AAA-protein
subdomain, IPR003593|AAA ATPase, IPR009010|Aspartate
decarboxylase-like fold, IPR003338|AAA ATPase VAT, N-terminal,
IPR004201|Cell division protein 48, CDC48, domain 2, IPR003959|AAA
ATPase, central region
(878 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0101 - 25581800-25581943,25582030-25582095,25582268-255823... 487 e-137
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 175 2e-43
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 165 1e-40
08_02_0657 - 19749835-19751942,19753123-19753561 165 2e-40
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003... 148 2e-35
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 148 2e-35
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 146 5e-35
11_01_0737 + 6211149-6211466,6212022-6212183,6212290-6213101,621... 144 2e-34
04_04_1163 - 31398565-31398654,31398729-31398812,31398893-313990... 144 2e-34
06_01_0646 + 4678422-4678508,4679042-4679123,4679236-4679327,467... 144 4e-34
02_05_0986 - 33334205-33334362,33334487-33334662,33334774-333349... 144 4e-34
06_03_1468 - 30354724-30354945,30359326-30359497,30359587-303597... 142 8e-34
06_03_1068 - 27341103-27341444,27341689-27341929,27342030-273423... 142 1e-33
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592... 142 1e-33
04_04_0394 + 24905501-24905673,24907824-24907868,24908412-249085... 140 3e-33
06_01_0065 + 549972-550770,551577-552190,552392-552544,552769-55... 138 2e-32
07_03_1770 - 29382508-29382591,29382901-29383041,29383134-293835... 137 3e-32
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 136 5e-32
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 136 7e-32
03_02_0691 + 10432615-10433109,10433155-10433216,10433526-104335... 136 7e-32
01_06_1310 - 36176008-36176472,36176547-36176774,36177313-361780... 136 7e-32
05_04_0102 + 18013994-18014049,18014236-18014335,18014499-180147... 135 1e-31
05_05_0098 + 22373384-22373522,22373566-22373772,22373879-223739... 132 1e-30
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665... 129 1e-29
08_02_1554 + 27841801-27842007,27842282-27842455,27842554-278426... 128 1e-29
02_05_0136 + 26174965-26175849,26176965-26177030,26177124-261772... 128 3e-29
06_01_0876 - 6712224-6712812,6713777-6715233 124 3e-28
01_06_0192 + 27347369-27348826,27349124-27349264,27349350-273510... 124 3e-28
04_03_0179 - 12304726-12304782,12305509-12305601,12305729-123058... 121 2e-27
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 119 9e-27
01_05_0430 + 22078651-22078677,22079269-22079356,22079669-220799... 114 3e-25
04_04_0171 - 23282840-23283036,23283360-23283660,23283747-232840... 113 4e-25
01_05_0429 + 22070636-22070662,22071490-22071577,22071908-220721... 111 2e-24
01_05_0724 - 24612712-24612852,24612985-24613038,24613340-246134... 108 2e-23
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 108 2e-23
01_06_0280 + 28129750-28129868,28130677-28131145,28133605-281338... 101 3e-21
01_01_0886 - 6970112-6970225,6970357-6970473,6970567-6970635,697... 99 1e-20
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 92 2e-18
06_01_0860 - 6514921-6515034,6515125-6515196,6515344-6515400,651... 92 2e-18
02_05_0752 + 31491462-31491921,31492177-31492271,31492346-314925... 91 4e-18
11_06_0634 - 25685216-25685329,25685407-25685511,25685681-256857... 89 2e-17
03_02_0971 - 12807981-12808094,12808949-12809053,12809236-128092... 89 2e-17
01_05_0749 + 24890944-24891146,24891414-24891535,24891633-248917... 88 2e-17
09_06_0271 + 21959213-21960559 87 4e-17
01_01_0270 - 2225250-2225263,2225549-2225732,2225817-2225972,222... 86 1e-16
06_01_0209 + 1587656-1587876,1587964-1588055,1590520-1590545,159... 83 1e-15
06_03_1386 + 29816744-29816941,29817030-29817330,29817421-298175... 81 3e-15
02_01_0450 + 3234378-3234834,3235118-3235223,3235722-3235920,323... 80 7e-15
01_01_0268 - 2214923-2215048,2215131-2215286,2215371-2215469,221... 80 7e-15
01_06_0763 + 31800556-31800618,31800659-31800802,31800859-318009... 77 8e-14
02_05_0693 - 30977323-30977421,30977783-30977843,30978874-309789... 71 5e-12
01_06_0221 - 27653591-27653724,27654270-27654473,27655216-276553... 67 5e-11
04_04_0251 + 23930789-23930960,23931065-23931128,23931641-239317... 64 4e-10
02_05_0459 + 29217728-29217919,29218095-29218190,29219785-292198... 56 9e-08
05_07_0306 - 29108860-29109282,29109425-29110441 53 1e-06
12_02_0277 + 16682836-16684368 48 2e-05
12_02_0275 + 16662206-16663738 48 2e-05
02_05_0405 + 28708077-28708391,28708478-28708573,28709030-287094... 48 2e-05
10_08_0645 - 19562886-19564484 47 6e-05
12_02_0291 + 16951154-16952740 47 8e-05
05_07_0307 - 29111643-29112104,29112222-29113214 47 8e-05
06_03_1259 - 28800954-28802468 46 2e-04
01_05_0631 + 23835120-23836109,23836204-23836674 45 2e-04
02_02_0522 - 11161385-11161537,11162513-11162668,11164176-111642... 45 3e-04
01_06_0035 + 25782410-25783384,25784130-25784696 44 4e-04
12_02_0289 - 16914975-16916238,16916246-16916484 44 5e-04
03_06_0343 + 33274329-33274981,33275197-33276121 44 5e-04
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 43 0.001
12_02_0122 + 13923510-13925081 42 0.003
12_02_1267 - 27448871-27450445 40 0.007
07_01_0670 + 5030971-5032698 40 0.009
12_02_1268 + 27458823-27460046 39 0.015
07_01_0671 + 5036069-5037670 39 0.015
09_04_0308 + 16567361-16568854,16568946-16569068,16569372-165696... 39 0.020
03_01_0100 - 791425-792996 38 0.026
02_05_0415 + 28787353-28787496,28787658-28788204,28788297-287883... 38 0.035
07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408... 37 0.081
06_03_1258 + 28796643-28798169 37 0.081
02_05_0922 - 32742863-32742958,32743081-32743136,32743253-327433... 37 0.081
07_03_0607 + 19916946-19917479,19917543-19918010,19918092-199184... 36 0.11
07_03_0605 + 19908541-19909605,19909703-19910092 36 0.11
03_05_0157 - 21346104-21347693 36 0.11
01_02_0077 + 10889048-10889082,10890243-10890605,10890680-10891619 36 0.11
05_06_0196 + 26293889-26294122,26294317-26294375,26294454-262945... 36 0.14
03_01_0417 - 3197956-3198438,3198550-3200001,3200116-3200277,320... 36 0.19
07_01_0672 - 5041742-5043175 35 0.25
03_02_0741 - 10857656-10857844,10858315-10858848,10859516-108598... 35 0.25
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 35 0.33
02_02_0371 - 9513742-9514293,9514784-9514923,9515217-9515556,951... 35 0.33
09_04_0220 - 15813809-15815380 34 0.57
06_01_0608 - 4399252-4399894,4401640-4402427 34 0.57
02_04_0271 + 21445113-21445865,21446727-21446788,21446927-214470... 33 0.75
06_01_0400 + 2862684-2862872,2862956-2863170,2863298-2863448,286... 33 0.99
05_06_0166 + 26093618-26095381,26095820-26096039,26096345-260966... 33 0.99
01_06_0595 - 30485460-30486097,30486721-30487179,30487339-304875... 33 0.99
12_02_1269 + 27462644-27463612 33 1.3
12_02_1017 + 25339515-25339548,25339689-25339837,25339932-253399... 33 1.3
10_06_0151 + 11276554-11276916,11277020-11277403 33 1.3
01_06_1273 + 35896320-35896400,35896548-35896736,35897817-358979... 33 1.3
12_02_0295 + 17006064-17007063,17007068-17007666 32 1.7
12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,709... 32 1.7
04_04_0012 + 22145111-22146388 32 1.7
02_04_0114 + 19879468-19880671,19882007-19882179,19882265-198826... 32 1.7
07_01_0564 - 4183441-4183530,4183683-4183752,4183972-4184063,418... 32 2.3
03_06_0342 + 33268971-33270533 32 2.3
12_01_0647 - 5485100-5487028 31 3.0
07_01_0665 + 5001599-5003149 31 3.0
02_02_0042 - 6297211-6297981 31 3.0
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 31 4.0
04_04_1340 + 32766773-32767582 31 4.0
12_01_0489 + 3872495-3872538,3872663-3872741,3872835-3872914,387... 31 5.3
11_06_0562 + 25003246-25003746,25004975-25005214,25005576-250060... 31 5.3
07_01_0478 - 3605306-3605614,3605766-3605906 31 5.3
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865... 31 5.3
04_03_0784 - 19610370-19611548,19611830-19611919,19612001-196120... 31 5.3
09_06_0067 - 20645012-20645095,20645365-20645466,20645583-206458... 30 7.0
06_03_0499 + 21461608-21463427,21463517-21463627,21463867-214641... 30 7.0
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 30 9.3
06_03_1175 + 28168007-28170058 30 9.3
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 30 9.3
>05_06_0101 -
25581800-25581943,25582030-25582095,25582268-25582390,
25582635-25582722,25582823-25582920,25583088-25583147,
25583228-25583288,25583374-25583505,25583957-25584167,
25584515-25584648,25584907-25584989,25585077-25585142,
25585552-25585607,25585701-25585800,25586313-25586421,
25586499-25586653,25586767-25586937,25587129-25587212,
25587261-25587345,25587431-25587477,25587912-25588124
Length = 761
Score = 487 bits (1201), Expect = e-137
Identities = 275/596 (46%), Positives = 373/596 (62%), Gaps = 39/596 (6%)
Query: 1 MKAAKCPSDELAITNCALIHQDD---FPSDIKHIEVSTGPSQHFVFSIRFYNGVDRGTVG 57
M A P ELA+TNCA + D FP+ + + FVF++R Y D T
Sbjct: 19 MVVASTPGQELALTNCAYVSSADIRRFPNALALV------GDAFVFTLR-YPFADLVT-- 69
Query: 58 FSAPQRKWATLSIGQTIDVKPFKPSSAECLCSVTLEADFMMKKTTSTDP----------- 106
R+ +S G +I V F P L +TLE ++ +T +
Sbjct: 70 ---KSRRQTKVSAGDSITVSSFAPPDDFKLALLTLELEYTKARTNRNEECNLICMSLVSQ 126
Query: 107 YDSEQMARDFLIQFANQVFTVGQQLAFLFQEKKVLSLIVKNLEAVDVVALAAGANAVPRR 166
D+ +A+ +F +QV T GQ++ F F + + + L L N+ P
Sbjct: 127 LDAVVLAQQLRRRFLDQVMTSGQRVPFEFCGTNYIFTVNQAL-------LDGQENSTP-- 177
Query: 167 VRMGRLLPDASVQFDKAENSSLNLIGKAKGKQPRQSIINPDWDFGKMGIGGLDNEFNAIF 226
+ G L D + F+ A NS + ++ + + + + +++ K+GIGGL EF IF
Sbjct: 178 LDRGFLSSDTYIIFEAAPNSGIKVVNQKEAASSKL-FKHKEFNLEKLGIGGLSAEFTDIF 236
Query: 227 RRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQIL 286
RRAFASRVFPP VV +LG KHVKGILLYGPPGTGKTLMARQIGK+LN EPKIVNGP++L
Sbjct: 237 RRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVL 296
Query: 287 DKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVV 346
K+VGE+E N+R LFADAE ++K G S LH+IIFDEIDAICK+RGS TGVHD++V
Sbjct: 297 SKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIV 356
Query: 347 NQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHT 406
NQLL+KIDGV+ LNN+L+IGMTNR+D++DEALLRPGRLEV +EI LPDE GR+QIL IHT
Sbjct: 357 NQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDENGRLQILQIHT 416
Query: 407 KRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAME 466
+M+E ++ +V+ ELA TKN+SGAELEG+V++A S A+NR I + P E
Sbjct: 417 NKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTK--PLDEE 474
Query: 467 KLMVERTDFLHALENDIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARAT 526
+ V DF++AL ++I PAFG S + LE RG+V+ G ++E G L ++Q + +
Sbjct: 475 SIKVTMDDFVNAL-HEITPAFGASTDDLERCRLRGMVDCGKAHRHLYERGMLLVEQVKVS 533
Query: 527 EASGLVSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRK 582
+ S LV+ LLEGP SGK+ALAA + SDF +VK+ S E M+GF+E++KC QI K
Sbjct: 534 KGSPLVTCLLEGPAGSGKSALAATVGIDSDFAYVKIISAETMIGFSESSKCAQICK 589
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 175 bits (425), Expect = 2e-43
Identities = 124/363 (34%), Positives = 184/363 (50%), Gaps = 21/363 (5%)
Query: 209 DFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQI 268
+ G +GG+ + I R + P++ + +G K KGILLYGPPG+GKTL+AR +
Sbjct: 206 EVGYDDVGGVRKQMAQI-RELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAV 264
Query: 269 GKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAI 328
A ++NGP+I+ K GESE+N+R+ F EE EK + II DEID+I
Sbjct: 265 ANETGAFF-FLINGPEIMSKLAGESESNLRKAF---EEAEKNAPS-----IIFIDEIDSI 315
Query: 329 CKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQM 388
R G V +V+QLL+ +DG+ ++++V+G TNR + ID AL R GR + ++
Sbjct: 316 APKREKTHGE--VERRIVSQLLTLMDGLKARSHVIVMGATNRPNSIDPALRRFGRFDREI 373
Query: 389 EIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGL-VRAAQSTA 447
+IG+PDE GR+++L IHTK M K+AEDVD +A T + GA+L L AA
Sbjct: 374 DIGVPDEVGRLEVLRIHTKNM----KLAEDVDLEHIAKDTHGYVGADLAALCTEAALQCI 429
Query: 448 MNRLIKASSKVE-VDPEAMEKLMVERTDFLHALENDIKPAFGTSAEALEHFLARGIVNWG 506
++ + E +D E + + V F AL A + + + I
Sbjct: 430 REKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNVSWEDIGGLE 489
Query: 507 SPVSSIFEDGQLYIQQARATEASGL---VSVLLEGPPNSGKTALAAQLAKLSDFPFVKVC 563
+ + E Q ++ E G+ VL GPP GKT LA +A F+ V
Sbjct: 490 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 549
Query: 564 SPE 566
PE
Sbjct: 550 GPE 552
Score = 163 bits (396), Expect = 5e-40
Identities = 102/258 (39%), Positives = 146/258 (56%), Gaps = 19/258 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGGL+N + + V PE E+ G KG+L YGPPG GKTL+A+ I A
Sbjct: 485 IGGLENVKREL-QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA 543
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
V GP++L + GESEAN+R +F D + C ++ FDE+D+I RGS
Sbjct: 544 NFIS-VKGPELLTMWFGESEANVREIF-DKARQSAPC-------VLFFDELDSIATQRGS 594
Query: 335 -VGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLP 393
VG G D V+NQLL+++DG++ + +IG TNR D+ID ALLRPGRL+ + I LP
Sbjct: 595 SVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP 654
Query: 394 DEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIK 453
D++ R+QI K +A+DVD LA T+ FSGA++ + + A A+ I+
Sbjct: 655 DDQSRLQIF----KACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIE 710
Query: 454 ASSKVEV----DPEAMEK 467
++E +PEAME+
Sbjct: 711 KDIEMEKRRKDNPEAMEE 728
Score = 30.3 bits (65), Expect = 7.0
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDM 568
+LL GPP SGKT +A +A + F + PE M
Sbjct: 247 ILLYGPPGSGKTLIARAVANETGAFFFLINGPEIM 281
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 165 bits (402), Expect = 1e-40
Identities = 126/372 (33%), Positives = 186/372 (50%), Gaps = 30/372 (8%)
Query: 209 DFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQI 268
+ G +GG+ + I R + P++ + +G K KGILLYGPPG+GKTL+AR +
Sbjct: 206 EVGYDDVGGVRKQMAQI-RELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAV 264
Query: 269 GKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAI 328
A ++NGP+I+ K GESE+N+R+ F EE EK + II DEID+I
Sbjct: 265 ANETGAFF-FLINGPEIMSKLAGESESNLRKAF---EEAEKNAPS-----IIFIDEIDSI 315
Query: 329 CKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQM 388
R G V +V+QLL+ +DG+ ++++V+G TNR + ID AL R GR + ++
Sbjct: 316 APKREKTNGE--VERRIVSQLLTLMDGLKARSHVIVMGATNRPNSIDPALRRFGRFDREI 373
Query: 389 EIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGL-VRAAQSTA 447
+IG+PDE GR+++L IHTK M K+AEDVD +A T + GA+L L AA
Sbjct: 374 DIGVPDEVGRLEVLRIHTKNM----KLAEDVDLELIAKDTHGYVGADLAALCTEAALQCI 429
Query: 448 MNRLIKASSKVE-VDPEAMEKLMVERTDFLHALENDIKPAFGTSAEALEHFL---ARGIV 503
++ + E +D E + + V F AL A + + + G+
Sbjct: 430 REKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNVSWEDIGGLE 489
Query: 504 N----WGSP--VSSIFEDGQLYIQQARATEASGL---VSVLLEGPPNSGKTALAAQLAKL 554
N P V + Q ++ E G+ VL GPP GKT LA +A
Sbjct: 490 NVKRELQEPIYVLEFLQTVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 549
Query: 555 SDFPFVKVCSPE 566
F+ V PE
Sbjct: 550 CQANFISVKGPE 561
Score = 160 bits (388), Expect = 5e-39
Identities = 96/236 (40%), Positives = 137/236 (58%), Gaps = 18/236 (7%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
PE E+ G KG+L YGPPG GKTL+A+ I A V GP++L + GESEAN
Sbjct: 515 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS-VKGPELLTMWFGESEAN 573
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS-VGGNTGVHDTVVNQLLSKIDG 355
+R +F D + C ++ FDE+D+I RGS VG G D V+NQLL+++DG
Sbjct: 574 VREIF-DKARQSAPC-------VLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDG 625
Query: 356 VDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKI 415
++ + +IG TNR D+ID ALLRPGRL+ + I LPDE+ R+QI K +
Sbjct: 626 MNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRLQIF----KACLRKSPV 681
Query: 416 AEDVDSMELATLTKNFSGAELEGLVRAAQSTA----MNRLIKASSKVEVDPEAMEK 467
A+DVD LA T+ FSGA++ + + A A + + I+ + + +PEAME+
Sbjct: 682 AKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKENPEAMEE 737
Score = 30.3 bits (65), Expect = 7.0
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDM 568
+LL GPP SGKT +A +A + F + PE M
Sbjct: 247 ILLYGPPGSGKTLIARAVANETGAFFFLINGPEIM 281
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 165 bits (400), Expect = 2e-40
Identities = 120/336 (35%), Positives = 170/336 (50%), Gaps = 21/336 (6%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
P++ + LG + KGILLYGPPGTGKTL+AR I A +VNGP+I+ GESEAN
Sbjct: 238 PKLFQTLGVRPPKGILLYGPPGTGKTLLARAIAAESGAHFV-VVNGPEIMSGMPGESEAN 296
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV 356
+R +FA+A+ A S I+ DEID+I +R G V VV+QLL+ +DG+
Sbjct: 297 LRAVFAEAD-----AAAPS---IVFMDEIDSIAPSREKAHGE--VERRVVSQLLTLMDGL 346
Query: 357 DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIA 416
++VIG TNR + +D AL R GR + +++IG+PDE GR++IL IHTK M ++
Sbjct: 347 RPRAQVIVIGATNRPNSLDPALRRFGRFDRELDIGVPDELGRLEILRIHTKNM----PLS 402
Query: 417 EDVDSMELATLTKNFSGAELEGLV-RAAQSTAMNRL-IKASSKVEVDPEAMEKLMVERTD 474
+DVD + T F G++L L AA +L I +D E + L V
Sbjct: 403 DDVDLERVGKDTHGFVGSDLASLCSEAAMQCIREKLDIIDIENDTIDVEILNSLTVTMDH 462
Query: 475 FLHALENDIKPAF-GTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLV- 532
A+E A T + I G + E Q ++ + G+
Sbjct: 463 LKFAMEVTKPSALRETGIVEVPKVSWDDIGGLGEVKRELQETVQYPVEHPEMFDLFGMSP 522
Query: 533 --SVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VL GPP GKT +A +AK F+ + PE
Sbjct: 523 SRGVLFYGPPGCGKTMMAKAIAKECKANFISIKGPE 558
Score = 152 bits (369), Expect = 1e-36
Identities = 92/245 (37%), Positives = 136/245 (55%), Gaps = 15/245 (6%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGGL E + V PE+ + G +G+L YGPPG GKT+MA+ I K A
Sbjct: 491 IGGL-GEVKRELQETVQYPVEHPEMFDLFGMSPSRGVLFYGPPGCGKTMMAKAIAKECKA 549
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARG- 333
I GP++L + GESE N+R LF D + C I+ FDE+D+I RG
Sbjct: 550 NFISI-KGPELLTMWFGESEGNVRNLF-DKARQSAPC-------ILFFDELDSIAVKRGN 600
Query: 334 SVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLP 393
SVG G D V+NQLL+++DG++ + VIG TNR D+ID A+LRPGRL+ + I LP
Sbjct: 601 SVGDAGGTPDRVLNQLLTEMDGINAKKTVFVIGATNRPDIIDPAMLRPGRLDQLIYIPLP 660
Query: 394 DEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIK 453
D R++I + ++ ++ VD +A T FSGA+++ + + A A+ +++
Sbjct: 661 DASSRLEIFRANLRK----APMSRHVDLPAMAASTDGFSGADIKEICQRACKLAVREVVQ 716
Query: 454 ASSKV 458
S+ V
Sbjct: 717 KSTLV 721
Score = 35.9 bits (79), Expect = 0.14
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVG 570
+LL GPP +GKT LA +A S FV V PE M G
Sbjct: 252 ILLYGPPGTGKTLLARAIAAESGAHFVVVNGPEIMSG 288
>06_03_0711 +
23798998-23799106,23799838-23799957,23800181-23800317,
23800418-23800579,23800707-23800793,23800872-23800958,
23801317-23801454,23802023-23802214,23802287-23802385,
23802490-23802564
Length = 401
Score = 148 bits (358), Expect = 2e-35
Identities = 89/235 (37%), Positives = 139/235 (59%), Gaps = 15/235 (6%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGL ++ + R + + P++ ++G K KG+LLYGPPGTGKTL+AR I ++A
Sbjct: 143 VGGLSDQIREL-RESIELPLMNPKLFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 201
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
KIV+ I+DKY+GES IR +F+ A E + C II DEIDAI R S
Sbjct: 202 NFLKIVSSA-IIDKYIGESARLIREMFSYAREHQP-C-------IIFMDEIDAIGGRRFS 252
Query: 335 VGGNTGVH-DTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLP 393
G + + +LL+++DG D+L + +I TNR D++D ALLRPGRL+ ++EI LP
Sbjct: 253 EGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 312
Query: 394 DEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAM 448
+E+ R+++L IH + ++ ++D + L + F+GA+L + A A+
Sbjct: 313 NEQSRMEVLKIHAAGIAKH----GEIDYEAVVKLAEGFNGADLRNVCTEAGMAAI 363
Score = 33.5 bits (73), Expect = 0.75
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCS 564
VLL GPP +GKT LA +A D F+K+ S
Sbjct: 178 VLLYGPPGTGKTLLARAIASNIDANFLKIVS 208
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 148 bits (358), Expect = 2e-35
Identities = 89/235 (37%), Positives = 138/235 (58%), Gaps = 15/235 (6%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGL ++ + R + + PE+ ++G K KG+LLYGPPGTGKTL+AR I ++A
Sbjct: 142 VGGLSDQIREL-RESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDA 200
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
KIV+ I+DKY+GES IR +F A + + C II DEIDAI R S
Sbjct: 201 NFLKIVSSA-IIDKYIGESARLIREMFGYARDHQP-C-------IIFMDEIDAIGGRRFS 251
Query: 335 VGGNTGVH-DTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLP 393
G + + +LL+++DG D+L + +I TNR D++D ALLRPGRL+ ++EI LP
Sbjct: 252 EGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 311
Query: 394 DEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAM 448
+E+ R+++L IH + ++ ++D + L + F+GA+L + A A+
Sbjct: 312 NEQARMEVLKIHAAGIAKH----GEIDYEAVVKLAEGFNGADLRNVCTEAGMAAI 362
Score = 33.5 bits (73), Expect = 0.75
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCS 564
VLL GPP +GKT LA +A D F+K+ S
Sbjct: 177 VLLYGPPGTGKTLLARAIASNIDANFLKIVS 207
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 146 bits (355), Expect = 5e-35
Identities = 90/237 (37%), Positives = 134/237 (56%), Gaps = 18/237 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGGLD + I + + PE+ E LG KG+LLYGPPGTGKTL+AR + +
Sbjct: 190 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 248
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
+ V+G +++ KY+GE +R LF A E II DEID+I AR
Sbjct: 249 TFIR-VSGSELVQKYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSIGSARMQ 299
Query: 333 -GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
GS GG++ V T++ +LL+++DG + N I V+ TNR D++D+ALLRPGR++ ++E
Sbjct: 300 SGSGGGDSEVQRTML-ELLNQLDGFEASNKIKVLMATNRMDILDQALLRPGRIDRKIEFP 358
Query: 392 LPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAM 448
P+E R IL IH+++M + +D ++A SGAEL+ + A A+
Sbjct: 359 NPNEDSRFDILKIHSRKM----NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 411
Score = 35.5 bits (78), Expect = 0.19
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 509 VSSIFEDGQLYIQQARATEASGLVS---VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSP 565
+ I E +L I+ E+ G+ VLL GPP +GKT LA +A +D F++V
Sbjct: 197 IKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGS 256
Query: 566 E 566
E
Sbjct: 257 E 257
>11_01_0737 +
6211149-6211466,6212022-6212183,6212290-6213101,
6213188-6213395,6214157-6214364,6214752-6215206,
6215585-6216011,6216391-6216471,6216571-6216761,
6216855-6216998
Length = 1001
Score = 144 bits (350), Expect = 2e-34
Identities = 83/216 (38%), Positives = 121/216 (56%), Gaps = 13/216 (6%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
P+ E +G +G+L+ GPPG KTLMAR + V GP++ K+VG+SE
Sbjct: 755 PKAFENMGVSPPRGLLMIGPPGCSKTLMARAVASEAKLNF-LAVKGPELFSKWVGDSEKA 813
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV 356
+R LFA A + I+ FDEID + RG + V D V++QLL ++DG+
Sbjct: 814 VRSLFAKARDNAPA--------ILFFDEIDGLAVTRGRENDSVSVGDRVLSQLLVEMDGL 865
Query: 357 DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIA 416
+Q + VI TNR D ID ALLRPGR + +++ PDE RV I IHT+ M +
Sbjct: 866 EQRIGVTVIAATNRPDKIDCALLRPGRFDRLLDVQPPDEADRVDIFRIHTRNM----PCS 921
Query: 417 EDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLI 452
DV+ ELA LT+ ++GA+++ + R A A++ I
Sbjct: 922 HDVNLNELARLTEGYTGADIKLVCREAAIAALDENI 957
Score = 108 bits (259), Expect = 2e-23
Identities = 87/254 (34%), Positives = 125/254 (49%), Gaps = 27/254 (10%)
Query: 205 NPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVK------GILLYGPPG 258
N D++ G +GGL E I + + +Q+G + VK GILL GPPG
Sbjct: 396 NGDFNHGPR-LGGLSKESKEI------KEIISFSIKDQIGLQRVKDNLWYRGILLSGPPG 448
Query: 259 TGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLH 318
TGKT +A I NGP+I+ +Y GESE + +F+ A++
Sbjct: 449 TGKTSLATSCAYDEGVNLFTI-NGPEIISQYYGESEQALYDVFSSAKQAAPA-------- 499
Query: 319 IIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEAL 378
+I DE+DAI R G+ + +V LL ID + + +LVI TNR D ID AL
Sbjct: 500 VIFIDELDAIAPERKD--GSEELSIRIVVTLLKLIDAMSPRDRVLVIAATNRPDSIDPAL 557
Query: 379 LRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEG 438
RP RL+ ++EIG+P R+ IL H ++ E ++S LA+ T F GA+L
Sbjct: 558 KRPERLDRKIEIGVPSPVQRLDILQ-HLLVGVQHSLSCEQLES--LASATHGFVGADLAA 614
Query: 439 LVRAAQSTAMNRLI 452
L A +A+ R I
Sbjct: 615 LCNEAALSALRRYI 628
>04_04_1163 -
31398565-31398654,31398729-31398812,31398893-31399037,
31399118-31399239,31399338-31399376,31399491-31399601,
31399682-31399804,31399946-31400032,31400136-31400207,
31400349-31400621,31400704-31400895,31400988-31401171,
31401339-31401480,31401578-31401821,31401959-31402603,
31403024-31403293
Length = 940
Score = 144 bits (350), Expect = 2e-34
Identities = 104/291 (35%), Positives = 158/291 (54%), Gaps = 29/291 (9%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGL+ I ++ +LG + G+LLYGPPGTGKTL+A+ + +
Sbjct: 659 VGGLEEVKKVILDTIQLPLLYKHLFSSKLGKR--SGVLLYGPPGTGKTLLAKAVATECSL 716
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
V GP++++ YVGESE N+R +F A + C +I FDE+D++ ARGS
Sbjct: 717 NFLS-VKGPELINMYVGESEKNVRDIFEKARSA-RPC-------VIFFDELDSLAPARGS 767
Query: 335 VGGNTGVHDTVVNQLLSKIDGV-DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL- 392
+ GV D VV+QLL +IDG+ D ++ +IG TNR D++D ALLRPGR + + +G+
Sbjct: 768 SSDSAGVMDRVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYVGVN 827
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELA-TLTKNFSGAELEGLVRAAQSTAMNRL 451
D R +IL T R+Y K+ E+V + +A NF+GA++ L A A L
Sbjct: 828 SDASYRERILKAQT---RKY-KLHENVSLLSIAQQCPPNFTGADIYALCADAWYHAAKNL 883
Query: 452 IKASSKVEVDPE-----AMEKLMVERTDFLHALENDIKPAFGTSAEALEHF 497
K +E DP + + ++VE DF+ L DI P+ S E L+++
Sbjct: 884 AKT---LEADPSRTSEASADDVIVEINDFMTVL-GDITPSL--SIEELQNY 928
Score = 32.3 bits (70), Expect = 1.7
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VLL GPP +GKT LA +A F+ V PE
Sbjct: 693 VLLYGPPGTGKTLLAKAVATECSLNFLSVKGPE 725
>06_01_0646 +
4678422-4678508,4679042-4679123,4679236-4679327,
4679441-4679518,4679635-4679696,4680272-4680993,
4681115-4681272
Length = 426
Score = 144 bits (348), Expect = 4e-34
Identities = 98/269 (36%), Positives = 144/269 (53%), Gaps = 33/269 (12%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GG + + R + PE +LG KG+L YGPPGTGKTL+AR + +A
Sbjct: 170 VGGCKEQIEKM-REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDA 228
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
+++ G +++ KYVGE +R LF A + K C I+ FDE+DAI AR
Sbjct: 229 CFIRVI-GSELVQKYVGEGARMVRELFQMARSK-KAC-------IVFFDEVDAIGGARFD 279
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
VGG+ V T++ ++++++DG D NI V+ TNR D +D ALLRPGRL+ ++E GL
Sbjct: 280 DGVGGDNEVQRTML-EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGL--------VRAAQ 444
PD +GR QI IHT+ M D+ LA L N +GA++ + +RA +
Sbjct: 339 PDLEGRTQIFKIHTRTM----NCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARR 394
Query: 445 ST--------AMNRLIKASSKVEVDPEAM 465
T A+N++IK K P+ M
Sbjct: 395 KTVTEKDFLDAVNKVIKGYQKFSATPKYM 423
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VL GPP +GKT LA +A +D F++V E
Sbjct: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSE 237
>02_05_0986 -
33334205-33334362,33334487-33334662,33334774-33334955,
33335064-33335282,33335407-33335551,33336127-33336188,
33336282-33336359,33336517-33336608,33337086-33337167,
33337519-33337605
Length = 426
Score = 144 bits (348), Expect = 4e-34
Identities = 98/269 (36%), Positives = 144/269 (53%), Gaps = 33/269 (12%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GG + + R + PE +LG KG+L YGPPGTGKTL+AR + +A
Sbjct: 170 VGGCKEQIEKM-REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDA 228
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
+++ G +++ KYVGE +R LF A + K C I+ FDE+DAI AR
Sbjct: 229 CFIRVI-GSELVQKYVGEGARMVRELFQMARSK-KAC-------IVFFDEVDAIGGARFD 279
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
VGG+ V T++ ++++++DG D NI V+ TNR D +D ALLRPGRL+ ++E GL
Sbjct: 280 DGVGGDNEVQRTML-EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGL--------VRAAQ 444
PD +GR QI IHT+ M D+ LA L N +GA++ + +RA +
Sbjct: 339 PDLEGRTQIFKIHTRTM----NCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARR 394
Query: 445 ST--------AMNRLIKASSKVEVDPEAM 465
T A+N++IK K P+ M
Sbjct: 395 KTVTEKDFLDAVNKVIKGYQKFSATPKYM 423
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VL GPP +GKT LA +A +D F++V E
Sbjct: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSE 237
>06_03_1468 -
30354724-30354945,30359326-30359497,30359587-30359770,
30359865-30360111,30360817-30362052
Length = 686
Score = 142 bits (345), Expect = 8e-34
Identities = 87/235 (37%), Positives = 136/235 (57%), Gaps = 17/235 (7%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEA 295
P+ LG K KG LL GPPGTGKTL+AR + A P + ++ +VG +
Sbjct: 254 PDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG--EAGVPFFSCAASEFVELFVGVGAS 311
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS-VGGNTGVHDTVVNQLLSKID 354
+R LF A+ + C I+ DEIDA+ + RG+ +GG + +NQLL+++D
Sbjct: 312 RVRDLFEKAKAKAP-C-------IVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMD 363
Query: 355 GVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKK 414
G + ++V+ TNR D++D ALLRPGR + Q+ + PD GRV+IL +H++ K
Sbjct: 364 GFAGNSGVIVLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGRVKILEVHSRG----KA 419
Query: 415 IAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLM 469
+A+DVD ++A T F+GA+L+ L+ A A R +K SK E+ +A+E+++
Sbjct: 420 LAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIS-DALERII 473
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYK 588
LL GPP +GKT LA +A + PF C+ + V ++R + EK K
Sbjct: 269 LLVGPPGTGKTLLARAVAGEAGVPFFS-CAASEFVELFVGVGASRVRDLFEKAK 321
>06_03_1068 -
27341103-27341444,27341689-27341929,27342030-27342343,
27342672-27343805
Length = 676
Score = 142 bits (344), Expect = 1e-33
Identities = 87/227 (38%), Positives = 126/227 (55%), Gaps = 16/227 (7%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEA 295
PE +G + KG+LL GPPGTGKTL+A+ I A P ++G + ++ +VG +
Sbjct: 236 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 293
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS-VGGNTGVHDTVVNQLLSKID 354
+R LF A+E C I+ DEIDA+ + RG+ +GG + +NQLL+++D
Sbjct: 294 RVRDLFKKAKENAP-C-------IVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMD 345
Query: 355 GVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKK 414
G + I+VI TNR D++D ALLRPGR + Q+ + +PD +GR +IL +H KK
Sbjct: 346 GFEGNTGIIVIAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSN----KK 401
Query: 415 IAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVD 461
DV +A T FSGA+L L+ A A R A S E+D
Sbjct: 402 FDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTAISSKEID 448
Score = 36.3 bits (80), Expect = 0.11
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYKTHGAK 593
VLL GPP +GKT LA +A + PF + E F E + +VR+ +K K
Sbjct: 250 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSE----FVEMFVGVGASRVRDLFK----K 301
Query: 594 LTECAPC 600
E APC
Sbjct: 302 AKENAPC 308
>02_01_0789 -
5919271-5919411,5920105-5920215,5920303-5920401,
5920486-5920642,5920774-5920937,5921017-5921079,
5921153-5921377,5922038-5922135,5923283-5923499
Length = 424
Score = 142 bits (344), Expect = 1e-33
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 18/237 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGGLD + I + + PE+ E LG KG+LLYGPPGTGKTL+AR + +
Sbjct: 168 IGGLDQQIKEI-KEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 226
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
+ V+G +++ KY+GE +R LF A E II DEID+I AR
Sbjct: 227 TFIR-VSGSELVQKYIGEGSRMVRELFVMAREHAPS--------IIFMDEIDSIGSARME 277
Query: 333 -GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
G+ G++ V T++ +LL+++DG + N I V+ TNR D++D+ALLRPGR++ ++E
Sbjct: 278 SGTGNGDSEVQRTML-ELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP 336
Query: 392 LPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAM 448
P+E R IL IH+++M + +D ++A SGAEL+ + A A+
Sbjct: 337 NPNEDSRFDILKIHSRKM----NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 389
Score = 35.5 bits (78), Expect = 0.19
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 509 VSSIFEDGQLYIQQARATEASGLVS---VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSP 565
+ I E +L I+ E+ G+ VLL GPP +GKT LA +A +D F++V
Sbjct: 175 IKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGS 234
Query: 566 E 566
E
Sbjct: 235 E 235
>04_04_0394 +
24905501-24905673,24907824-24907868,24908412-24908513,
24908700-24908799,24908963-24909247,24909318-24909487,
24909846-24909974,24910332-24910428,24910541-24910618,
24910694-24911017
Length = 500
Score = 140 bits (340), Expect = 3e-33
Identities = 83/218 (38%), Positives = 129/218 (59%), Gaps = 17/218 (7%)
Query: 241 EQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRL 300
++LG ++G+LL+GPPG KT +A+ A + +G ++ KYVGE EA +RR
Sbjct: 253 DRLGISPIRGVLLHGPPGCSKTTLAKAAAHAAQASFFSL-SGAELYSKYVGEGEALLRRT 311
Query: 301 FADAEEEEKRCGANSGLHIIIFDEIDAICKAR----GSVGGNTGVHDTVVNQLLSKIDGV 356
F A R + S II FDE DAI R G+ GN V + +++ LL+++DG+
Sbjct: 312 FQMA-----RLASPS---IIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGL 363
Query: 357 DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIA 416
+ I+V+ TNR + ID ALLRPGR ++ + + PD +GR +IL IHT++M +
Sbjct: 364 ELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKM----PLG 419
Query: 417 EDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKA 454
+DVD ++A T+ F+GA+LEGL R A A+ +++
Sbjct: 420 DDVDLWKVAERTELFTGADLEGLCREAGMAALRESLRS 457
Score = 71.3 bits (167), Expect = 3e-12
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 10/224 (4%)
Query: 345 VVNQLLSKIDGVDQ--LNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQIL 402
+V QLL+ +DG L +++V+ R D I+ AL RPGR + ++E+ +P + R +IL
Sbjct: 80 IVGQLLTLMDGKSSKLLPHLVVVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEIL 139
Query: 403 NIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDP 462
++TK + + E VD +A + GA+L+ L R A A RL +S V
Sbjct: 140 KLYTKNLH----LGECVDLQSVAASCNGYVGADLQALCREAARRAYGRLSSSSESENV-- 193
Query: 463 EAMEKLMVERTDFLHALENDIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQ 522
+ +M + +N + A+ G+ + E +
Sbjct: 194 --LTLIMEDWESAKSVAKNSVTRGVTKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAAS 251
Query: 523 ARATEASGLVSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
S + VLL GPP KT LA A + F + E
Sbjct: 252 FDRLGISPIRGVLLHGPPGCSKTTLAKAAAHAAQASFFSLSGAE 295
>06_01_0065 +
549972-550770,551577-552190,552392-552544,552769-552885,
552972-553076,553269-553334,553430-553494,553577-553778,
554026-554169,554212-554340
Length = 797
Score = 138 bits (334), Expect = 2e-32
Identities = 96/279 (34%), Positives = 144/279 (51%), Gaps = 23/279 (8%)
Query: 177 SVQFDKAENSSLNLIGKAKGKQPRQSIINPDWDFGKMGIGGLDNEFNAIFRRAFASRVFP 236
S+ D E ++ ++ + ++ SI + WD +GGLD+ F R +
Sbjct: 464 SITMDDFEEAT-KMVQPSLRREGFSSIPDVTWD----DVGGLDS-LRKEFDRYIIRCIKQ 517
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
PE + G G LL+GPPG GKTL+A+ + A I GP++L+KYVGESE+
Sbjct: 518 PEEYKTFGLNMQAGFLLFGPPGCGKTLIAKAVAHEAGANFIHI-KGPELLNKYVGESESE 576
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV 356
+R++F A+ C I+ FDE+DA+ RG GG V + ++NQLL ++DG
Sbjct: 577 VRKIFIRAQTNTP-C-------ILFFDEVDALTTKRGKEGG--WVVERLLNQLLIELDGA 626
Query: 357 DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIA 416
+ + VIG TNR D+ID+A LRPGR + + LP RV IL + + K I+
Sbjct: 627 GERKGVFVIGATNRIDVIDDAALRPGRFGKKHYVPLPGADERVSIL----RALARNKPIS 682
Query: 417 EDVDSMELATL--TKNFSGAELEGLVRAAQSTAMNRLIK 453
VD LA KN +GA+L +V A A+ ++
Sbjct: 683 SSVDLGALARREECKNLTGADLASMVNEAAMAALEERLE 721
Score = 118 bits (285), Expect = 2e-26
Identities = 117/412 (28%), Positives = 190/412 (46%), Gaps = 53/412 (12%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GG+++ + + PEV LG K V G+LL+GPPG GKT +A I
Sbjct: 193 LGGMESVIEQLMMEVVVP-LCHPEVPRWLGVKPVAGLLLHGPPGCGKTTLAHAIANETGV 251
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
KI + P+++ G SE NIR LF A + I+ DEIDAI R +
Sbjct: 252 PFYKI-SAPEVVSGVSGASEENIRSLFKKAYR--------TAPSIVFIDEIDAIASKREN 302
Query: 335 VGGNTGVHDTVVNQLLSKIDGVDQL-----------------NNILVIGMTNRRDMIDEA 377
+ + +V QL++ +D Q ++VIG TNR D +D+A
Sbjct: 303 L--QREMERRIVTQLMTCMDEYHQQIGSGSGDVGSESAEKKPGYVIVIGATNRPDAVDQA 360
Query: 378 LLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELE 437
L RPGR + ++ +G+PDE R +IL + T+ +R + +D +++A T +F GA+L+
Sbjct: 361 LRRPGRFDREISLGVPDEYARKKILMMLTRNLR----LEGQLDLLKIARATSSFVGADLK 416
Query: 438 GLVRAAQSTAMNRLI---KASSKVEVDPEAMEKLMVERTDF-----LHALENDIKPAFGT 489
LV A + AM R+I +A E D + + D L +D + A
Sbjct: 417 ALVDKAGNLAMKRIIDRRRAQFCQEHDENSKHDWWRQPWDANEIEGLSITMDDFEEATKM 476
Query: 490 SAEAL--EHFLARGIVNWG--SPVSSIFEDGQLY----IQQARATEASGL---VSVLLEG 538
+L E F + V W + S+ ++ Y I+Q + GL LL G
Sbjct: 477 VQPSLRREGFSSIPDVTWDDVGGLDSLRKEFDRYIIRCIKQPEEYKTFGLNMQAGFLLFG 536
Query: 539 PPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYKTH 590
PP GKT +A +A + F+ + PE + + ++ ++RK+ + +T+
Sbjct: 537 PPGCGKTLIAKAVAHEAGANFIHIKGPELLNKYVGESES-EVRKIFIRAQTN 587
>07_03_1770 -
29382508-29382591,29382901-29383041,29383134-29383520,
29383685-29383930,29385396-29385437,29385973-29386461
Length = 462
Score = 137 bits (332), Expect = 3e-32
Identities = 88/262 (33%), Positives = 143/262 (54%), Gaps = 18/262 (6%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGGLD + I + A + PE+ E +G + KG++LYG PGTGKTL+A+ + +A
Sbjct: 209 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSA 267
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
++V G +++ KY+G+ +R LF A+E I+ DEIDA+ R
Sbjct: 268 TFLRVV-GSELIQKYLGDGPKLVRELFRVADELSPS--------IVFIDEIDAVGTKRYD 318
Query: 335 V--GGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
GG + T++ +LL+++DG D ++ VI TNR + +D ALLRPGR++ ++E L
Sbjct: 319 AHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL 377
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLI 452
PD K R +I IHT +M +A+DV+ E FSGA+++ + A A+
Sbjct: 378 PDIKTRRRIFQIHTSKM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERR 433
Query: 453 KASSKVEVDPEAMEKLMVERTD 474
+ + +A EK+M ++ +
Sbjct: 434 MKVTHADF-KKAKEKVMFKKKE 454
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 136 bits (330), Expect = 5e-32
Identities = 89/238 (37%), Positives = 133/238 (55%), Gaps = 17/238 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGGL+ + + A + + ++LG + KG+LLYGPPGTGKTLMAR NA
Sbjct: 167 IGGLEKQIQELVE-AIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 225
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
K+ GPQ++ ++G+ +R F A+E+ C II DEIDAI R
Sbjct: 226 TFLKLA-GPQLVQMFIGDGAKLVRDAFQLAKEKSP-C-------IIFIDEIDAIGTKRFD 276
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
V G+ V T++ +LL+++DG I VI TNR D++D AL+R GRL+ ++E
Sbjct: 277 SEVSGDREVQRTML-ELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPH 335
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNR 450
P E+ R +IL IH+++M + DV+ ELA T +F+GA+L+ + A A+ R
Sbjct: 336 PSEEARARILQIHSRKM----NVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 389
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VLL GPP +GKT +A A ++ F+K+ P+
Sbjct: 202 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 234
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 136 bits (329), Expect = 7e-32
Identities = 89/238 (37%), Positives = 133/238 (55%), Gaps = 17/238 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGGL+ + + A + + ++LG + KG+LLYGPPGTGKTLMAR NA
Sbjct: 164 IGGLEKQIQELVE-AIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNA 222
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
K+ GPQ++ ++G+ +R F A+E+ C II DEIDAI R
Sbjct: 223 TFLKLA-GPQLVQMFIGDGAKLVRDAFQLAKEKAP-C-------IIFIDEIDAIGTKRFD 273
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
V G+ V T++ +LL+++DG I VI TNR D++D AL+R GRL+ ++E
Sbjct: 274 SEVSGDREVQRTML-ELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPH 332
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNR 450
P E+ R +IL IH+++M + DV+ ELA T +F+GA+L+ + A A+ R
Sbjct: 333 PSEEARARILQIHSRKM----NVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 386
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VLL GPP +GKT +A A ++ F+K+ P+
Sbjct: 199 VLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 231
>03_02_0691 +
10432615-10433109,10433155-10433216,10433526-10433565,
10434562-10434807,10435020-10435189,10435323-10435539,
10435615-10435755,10435943-10436026
Length = 484
Score = 136 bits (329), Expect = 7e-32
Identities = 87/262 (33%), Positives = 143/262 (54%), Gaps = 18/262 (6%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGGLD + I + A + PE+ E +G + KG++LYG PGTGKTL+A+ + +A
Sbjct: 231 IGGLDAQIQEI-KEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSA 289
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
++V G +++ KY+G+ +R LF A++ I+ DEIDA+ R
Sbjct: 290 TFLRVV-GSELIQKYLGDGPKLVRELFRVADDLSPS--------IVFIDEIDAVGTKRYD 340
Query: 335 V--GGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
GG + T++ +LL+++DG D ++ VI TNR + +D ALLRPGR++ ++E L
Sbjct: 341 AHSGGEREIQRTML-ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL 399
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLI 452
PD K R +I IHT +M +A+DV+ E FSGA+++ + A A+
Sbjct: 400 PDIKTRRRIFQIHTSKM----TLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERR 455
Query: 453 KASSKVEVDPEAMEKLMVERTD 474
+ + +A EK+M ++ +
Sbjct: 456 MKVTHADF-KKAKEKVMFKKKE 476
>01_06_1310 -
36176008-36176472,36176547-36176774,36177313-36178080,
36178250-36178732,36179883-36180010,36180539-36180607,
36180688-36180892,36181005-36181067
Length = 802
Score = 136 bits (329), Expect = 7e-32
Identities = 83/211 (39%), Positives = 125/211 (59%), Gaps = 17/211 (8%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEA 295
P+ E+LG K KG LL GPPGTGKTL+A+ + P + ++G ++ +VG +
Sbjct: 342 PKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG--ESGVPFLSISGSDFMEMFVGVGPS 399
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHD---TVVNQLLSK 352
+R LF +E ++C + I+ DEIDAI +ARG GG +G HD + +NQLL +
Sbjct: 400 RVRNLF----QEARQCSPS----IVFIDEIDAIGRARGR-GGFSGGHDERESTLNQLLVE 450
Query: 353 IDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREY 412
+DG + ++V+ TNR D++D+ALLRPGR + Q+ I PD KGR QI I+ K+++
Sbjct: 451 MDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGRDQIFRIYLKKLKLD 510
Query: 413 KKIAEDVDSMELATLTKNFSGAELEGLVRAA 443
K+ S LA LT F+GA++ + A
Sbjct: 511 KE--PSFYSQRLAALTPGFAGADIANVCNEA 539
Score = 31.5 bits (68), Expect = 3.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGF 571
LL GPP +GKT LA A S PF+ + + M F
Sbjct: 357 LLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMF 393
>05_04_0102 +
18013994-18014049,18014236-18014335,18014499-18014783,
18014854-18015023,18015382-18015510,18016109-18016205,
18016318-18016395,18016474-18016635,18016673-18016771
Length = 391
Score = 135 bits (327), Expect = 1e-31
Identities = 80/203 (39%), Positives = 122/203 (60%), Gaps = 17/203 (8%)
Query: 241 EQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRL 300
++LG ++G+LL+GPPG KT +A+ A + +G ++ KYVGE EA +RR
Sbjct: 165 DRLGISPIRGVLLHGPPGCSKTTLAKAAAHAAQASFFSL-SGAELYSKYVGEGEALLRRT 223
Query: 301 FADAEEEEKRCGANSGLHIIIFDEIDAICKAR----GSVGGNTGVHDTVVNQLLSKIDGV 356
F A R + S II FDE DAI R G+ GN V + +++ LL+++DG+
Sbjct: 224 FQMA-----RLASPS---IIFFDEADAIAPKRTGPSGNSSGNATVGERLLSTLLTEMDGL 275
Query: 357 DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIA 416
+ I+V+ TNR + ID ALLRPGR ++ + + PD +GR +IL IHT++M +
Sbjct: 276 ELATGIIVLAATNRPNAIDAALLRPGRFDMVLYVPPPDAEGRYEILRIHTRKM----PLG 331
Query: 417 EDVDSMELATLTKNFSGAELEGL 439
+DVD ++A T+ F+GA+LEGL
Sbjct: 332 DDVDLWKVAERTELFTGADLEGL 354
Score = 62.9 bits (146), Expect = 1e-09
Identities = 52/204 (25%), Positives = 82/204 (40%), Gaps = 8/204 (3%)
Query: 363 LVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSM 422
LV+ R D I+ AL RPGR + ++E+ +P + R +IL ++TK + + E VD
Sbjct: 12 LVVASATRVDAIESALRRPGRFDSEIEVTVPTAEERFEILKLYTKNLH----LGECVDLQ 67
Query: 423 ELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVERTDFLHALEND 482
+A + GA+L+ L R A A RL +S V + +M + +N
Sbjct: 68 SVAASCNGYLGADLQALCREAARRAYGRLSSSSESENV----LTLIMEDWESAKSVAKNS 123
Query: 483 IKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLVSVLLEGPPNS 542
+ A+ G+ + E + S + VLL GPP
Sbjct: 124 VTRGVIKEIPAVSWDDIGGLKAVKKKLQQAVEWPIKHAASFDRLGISPIRGVLLHGPPGC 183
Query: 543 GKTALAAQLAKLSDFPFVKVCSPE 566
KT LA A + F + E
Sbjct: 184 SKTTLAKAAAHAAQASFFSLSGAE 207
>05_05_0098 +
22373384-22373522,22373566-22373772,22373879-22373953,
22374611-22374744,22375189-22375674,22375854-22376621,
22377367-22377594,22378294-22378773
Length = 838
Score = 132 bits (319), Expect = 1e-30
Identities = 80/210 (38%), Positives = 122/210 (58%), Gaps = 15/210 (7%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEA 295
P+ E+LG K KG LL GPPGTGKTL+A+ + P + ++G ++ +VG +
Sbjct: 373 PKKYEELGAKIPKGALLVGPPGTGKTLLAKATAG--ESGVPFLSISGSDFMEMFVGVGPS 430
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVG--GNTGVHDTVVNQLLSKI 353
+R LF +E ++C + II DEIDAI +ARG G G+ ++ +NQLL ++
Sbjct: 431 RVRNLF----QEARQCAPS----IIFIDEIDAIGRARGRGGFSGSNDERESTLNQLLVEM 482
Query: 354 DGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYK 413
DG + ++V+ TNR D++D+ALLRPGR + Q+ I PD KGR QI I+ K+++
Sbjct: 483 DGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDN 542
Query: 414 KIAEDVDSMELATLTKNFSGAELEGLVRAA 443
+ S LA LT F+GA++ + A
Sbjct: 543 E--PSFYSQRLAALTPGFAGADIANVCNEA 570
Score = 31.5 bits (68), Expect = 3.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGF 571
LL GPP +GKT LA A S PF+ + + M F
Sbjct: 388 LLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMF 424
>09_04_0727 +
19765175-19765384,19765523-19765595,19766476-19766570,
19766666-19768450,19768533-19768721,19768816-19768958,
19769075-19769320,19769975-19770059,19770117-19770191,
19770304-19770369,19770466-19770712,19770824-19771242
Length = 1210
Score = 129 bits (311), Expect = 1e-29
Identities = 91/280 (32%), Positives = 144/280 (51%), Gaps = 26/280 (9%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGGL + +A+ F ++P + +G+LL GPPGTGKTL+AR + +
Sbjct: 387 IGGLSDYIDALKEMVFFPLLYP-DFFANYHITPPRGVLLCGPPGTGKTLIARALACAASK 445
Query: 275 REPKIV----NGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICK 330
K+ G +L K+VGE+E ++ LF +A++ + II FDEID +
Sbjct: 446 AGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPS--------IIFFDEIDGLAP 497
Query: 331 ARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
R S +H+++V+ LL+ +DG+D +++IG TNR D ID AL RPGR + +
Sbjct: 498 VRSSK--QEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFFF 555
Query: 391 GLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMN- 449
LP + R +IL+IHT R++K ELA + GA+L+ L A A
Sbjct: 556 PLPGYEARAEILDIHT---RKWKDPPPKELKTELAASCVGYCGADLKALCTEAAIRAFRE 612
Query: 450 ---RLIKASSKVEVDPEAMEKLMVERTDFLHALENDIKPA 486
++ + K +D ++ + VE+ FL A+ + I PA
Sbjct: 613 KYPQVYTSDDKFVID---VDSVRVEKYHFLEAM-STITPA 648
>08_02_1554 + 27841801-27842007,27842282-27842455,27842554-27842653,
27843273-27843725,27843936-27844469,27844500-27844580,
27844690-27844781,27844890-27844963,27845071-27845293,
27845429-27845522,27845607-27845761,27845899-27846129,
27846803-27847003,27847257-27847382,27847497-27847558,
27847775-27847892,27848040-27848324,27848475-27848513
Length = 1082
Score = 128 bits (310), Expect = 1e-29
Identities = 81/247 (32%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 207 DWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMAR 266
D + G +GGL NE I + P + + + ILLYGP G GKT +
Sbjct: 786 DGEGGWEDVGGL-NEAVTIIKETLELPSKYPNIFTKAPVRLRSNILLYGPSGCGKTHIVG 844
Query: 267 QIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEID 326
+ R V GP++L+KY+G SE ++R FA A A + ++ FDE +
Sbjct: 845 AAAAACSLRFIS-VKGPELLNKYIGSSEQSVRDFFAKA--------AAAAPCLLFFDEFE 895
Query: 327 AICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEV 386
+I RG+ + GV D VVNQ L+++DGV+ L + V T++ ID ALLRPGR +
Sbjct: 896 SIAPQRGTQ--SAGVSDRVVNQFLTELDGVESLTGVFVFAATSKPQSIDAALLRPGRFDR 953
Query: 387 QMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQST 446
+ P R++IL +H++ + +A D E+A+LT+ F+GA+L ++R A+
Sbjct: 954 LILCDFPGWHERLEILKVHSREV----SLASDASLEEVASLTEGFTGADLAAILRDAKLA 1009
Query: 447 AMNRLIK 453
A++++++
Sbjct: 1010 AVHKVLE 1016
Score = 38.3 bits (85), Expect = 0.026
Identities = 85/437 (19%), Positives = 165/437 (37%), Gaps = 33/437 (7%)
Query: 177 SVQFDKAENSSLNLIGKAKGKQPRQSIINPDWDFGKMGIGGLDNEFNAIFRR-AFASRVF 235
S+Q D EN L G+ + + + +G ++N + + +R +
Sbjct: 471 SIQTDDLENLELKF-----GRLELDDGFSNGFKLTRSSLGWMENAMSDVTKRLSVLLSST 525
Query: 236 PPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEA 295
+ +QL +L+ GP G+GKT + R K + + + I + +A
Sbjct: 526 SLRLFDQLKLPFPGHVLVLGPRGSGKTALVRAAAKYFEDHKEILAHVIYIDCSKLTVGKA 585
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARG--SVGGNTGVHDTVVNQLLSKI 353
+ + E A S +I+FD++D + ++ D++V L +
Sbjct: 586 KETKQTIEDSISEALLHAPS---VILFDDMDNVVSVSSDPQAPQSSSSSDSIVRYLADIM 642
Query: 354 DGV-DQLNN------ILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHT 406
D D+ N I ++ + + L GR + +E+ + R +L H
Sbjct: 643 DEYKDKAQNACGYGPIALMASAQSLQSLPQDLTSSGRFDFHVELPVLAIPEREALLKHHV 702
Query: 407 KRMREYKKIAEDVDSMELATLTKNFSGAELEGLV-RAAQSTAMNRLIKASSKVE-VDPEA 464
+ + +++V S E+A+ + +L+ LV RA + A ++ +S+ V +P
Sbjct: 703 E--EHELQCSKEVLS-EIASKCDGYDAYDLDILVDRAVHAAASRFVLPSSASVNCAEPTL 759
Query: 465 M-EKLMVERTDFLHALENDIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQA 523
+ E + DFL D+ E + G+ + + E Y
Sbjct: 760 VKEDFLKAIHDFLPVAMRDLSKYAPADGEGGWEDVG-GLNEAVTIIKETLELPSKYPNIF 818
Query: 524 RATEASGLVSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKV 583
++LL GP GKT + A F+ V PE + + +++ + V
Sbjct: 819 TKAPVRLRSNILLYGPSGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGSSE----QSV 874
Query: 584 REKYKTHGAKLTECAPC 600
R+ + AK APC
Sbjct: 875 RDFF----AKAAAAAPC 887
>02_05_0136 +
26174965-26175849,26176965-26177030,26177124-26177258,
26177369-26177434,26177516-26177701,26177777-26177863,
26177985-26178098,26178174-26178298,26178375-26178483,
26179298-26179423,26179511-26179831,26180146-26180269,
26180405-26180529
Length = 822
Score = 128 bits (308), Expect = 3e-29
Identities = 80/211 (37%), Positives = 119/211 (56%), Gaps = 17/211 (8%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEA 295
PE +LG + +G+LL G PGTGKTL+A+ + A P I + + ++ YVG A
Sbjct: 368 PERYIRLGARPPRGVLLVGLPGTGKTLLAKAVAG--EAEVPFISCSASEFVELYVGMGAA 425
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS---VGGNTGVHDTVVNQLLSK 352
+R LFA A++E II DEIDA+ K+R + N T+ NQLL++
Sbjct: 426 RVRDLFARAKKESPS--------IIFIDEIDAVAKSRDGRYRIVSNDEREQTL-NQLLTE 476
Query: 353 IDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREY 412
+DG D + ++V+G TNR D++D AL RPGR + + + PD GR IL +H R+
Sbjct: 477 MDGFDTNSAVIVLGATNRADVLDPALRRPGRFDRVVMVEAPDRFGRESILKVHVS--RKE 534
Query: 413 KKIAEDVDSMELATLTKNFSGAELEGLVRAA 443
+ +DVD ++A +T F+GA+L LV A
Sbjct: 535 LPLGKDVDLSDIAAMTTGFTGADLANLVNEA 565
Score = 31.1 bits (67), Expect = 4.0
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMV 569
VLL G P +GKT LA +A ++ PF+ CS + V
Sbjct: 382 VLLVGLPGTGKTLLAKAVAGEAEVPFIS-CSASEFV 416
>06_01_0876 - 6712224-6712812,6713777-6715233
Length = 681
Score = 124 bits (299), Expect = 3e-28
Identities = 78/217 (35%), Positives = 121/217 (55%), Gaps = 17/217 (7%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEA 295
PE +G + KG+LL GPPGTGKTL+A+ I A P ++G + ++ +VG +
Sbjct: 238 PEKFTAVGARTPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSLSGSEFIEMFVGVGAS 295
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS-VGGNTGVHDTVVNQLLSKID 354
+R LF D + C ++ DEIDA+ + RG+ +GG + +NQLL+++D
Sbjct: 296 RVRDLF-DRAKASAPC-------LVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMD 347
Query: 355 GVDQLNN-ILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYK 413
G + ++VI TNR +++D ALLRPGR + ++ +GLPD +GR +IL +H K
Sbjct: 348 GFGGGDGGVVVIAATNRPEILDAALLRPGRFDRRVSVGLPDVRGREEILLVHGAN----K 403
Query: 414 KIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNR 450
++ V +A T FSGA+L L+ A A R
Sbjct: 404 RLDPGVSLAVVAMRTPGFSGADLANLMNEAAILAGRR 440
Score = 31.5 bits (68), Expect = 3.0
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VLL GPP +GKT LA +A + PF + E
Sbjct: 252 VLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSE 284
>01_06_0192 +
27347369-27348826,27349124-27349264,27349350-27351081,
27353739-27354606,27354784-27355957
Length = 1790
Score = 124 bits (299), Expect = 3e-28
Identities = 92/280 (32%), Positives = 138/280 (49%), Gaps = 25/280 (8%)
Query: 211 GKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGK 270
G + GL N ++ ++P E LG +G+LL+G PGTGKTL+ R +
Sbjct: 642 GWESVAGLSNVIQSMKEVVILPLLYP-EFFSSLGLTPPRGVLLHGHPGTGKTLVVRALIG 700
Query: 271 MLNAREPKIV----NGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEID 326
+ +I G L KYVG++E +R LF AE RC + II FDEID
Sbjct: 701 ACSQGNRRIAYFARKGADCLGKYVGDAERQLRLLFQVAE----RCQPS----IIFFDEID 752
Query: 327 AICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEV 386
+ +R T H++VV LLS +DG+ +++VIG TNR D ID AL RPGR +
Sbjct: 753 GLAPSRSRRQDQT--HNSVVATLLSLLDGLKSRGSVIVIGATNRPDAIDPALRRPGRFDR 810
Query: 387 QMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQST 446
++ LP + R IL++HTK+ + +A+ T ++GA+L+ + A
Sbjct: 811 EIYFPLPTFEDRSAILSLHTKK---WPSPISGAFLSVIASQTVGYAGADLQSICTQAAIN 867
Query: 447 AMNR-------LIKASSKVEVDPEAMEKLMVERTDFLHAL 479
A+ R L+ A E + ++VE D+L AL
Sbjct: 868 ALKRTCPLKEILLSAEKGFEHGRLPLPSILVEERDWLAAL 907
>04_03_0179 -
12304726-12304782,12305509-12305601,12305729-12305833,
12306715-12306793,12307297-12307415,12307728-12307919,
12308158-12308277,12309542-12309613,12310157-12310246,
12310402-12310485
Length = 336
Score = 121 bits (292), Expect = 2e-27
Identities = 84/226 (37%), Positives = 124/226 (54%), Gaps = 21/226 (9%)
Query: 214 GIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLN 273
GIGGL+ + + A + ++LG KG+LLYGPPGTGKTL+A N
Sbjct: 115 GIGGLEKQIEELVE-AVVLPIIHKNCFQRLGIHPPKGVLLYGPPGTGKTLVAHAFASQTN 173
Query: 274 AREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARG 333
A K+ GPQ+ K +GE +R F A+E+ C II DEIDAI ++
Sbjct: 174 ATFLKLT-GPQLAVKLIGEGARLVRDAFQLAKEKAP-C-------IIFIDEIDAI-GSKH 223
Query: 334 SVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLP 393
G+ V T+V +LL+++DGV +I VI TNR +++D A LR GRL+ ++E P
Sbjct: 224 FDSGDREVQQTIV-ELLNQLDGVGSYESIKVIAATNRPEVLDPAFLRSGRLDQKIEFPHP 282
Query: 394 DEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGL 439
E+ R IH+++M + DV+ ELA T +F+GA+L+ +
Sbjct: 283 SEQAR-----IHSRKMDK----NPDVNFEELACCTDDFNGAQLKAV 319
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VLL GPP +GKT +A A ++ F+K+ P+
Sbjct: 151 VLLYGPPGTGKTLVAHAFASQTNATFLKLTGPQ 183
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 119 bits (287), Expect = 9e-27
Identities = 77/223 (34%), Positives = 121/223 (54%), Gaps = 17/223 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGG D + I R A + E+ +Q+G +G+LLYGPPGTGKT++A+ + A
Sbjct: 117 IGGCDIQKQEI-REAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTA 175
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
++V G + + KY+GE +R +F A+E II DE+DAI AR
Sbjct: 176 AFIRVV-GSEFVQKYLGEGPRMVRDVFRLAKENAPA--------IIFIDEVDAIATARFD 226
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
G + V ++ +LL+++DG DQ N+ VI TNR D +D ALLRPGRL+ ++E L
Sbjct: 227 AQTGADREVQ-RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPL 285
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAE 435
PD + + + + T +M ++++VD + + S A+
Sbjct: 286 PDRRQKRLVFQVCTAKM----NLSDEVDLEDYVSRPDKISAAD 324
Score = 31.5 bits (68), Expect = 3.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VLL GPP +GKT LA +A + F++V E
Sbjct: 152 VLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSE 184
>01_05_0430 +
22078651-22078677,22079269-22079356,22079669-22079929,
22080693-22080950,22081036-22081160,22082375-22082851,
22082937-22083848
Length = 715
Score = 114 bits (275), Expect = 3e-25
Identities = 83/215 (38%), Positives = 117/215 (54%), Gaps = 18/215 (8%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEA 295
P+ +LG K KG+LL GPPGTGKT++AR I A P +G + + +VG
Sbjct: 252 PKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAG--EAGVPFFSCSGSEFEEMFVGVGAR 309
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDG 355
+R LFA A++ C II DEIDAI +R + +NQLL ++DG
Sbjct: 310 RVRDLFAAAKKRSP-C-------IIFMDEIDAIGGSRNPK--DQQYMKMTLNQLLVELDG 359
Query: 356 VDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKI 415
Q I+VI TN + +D+AL+RPGR + + + PD +GR QIL H ++ +
Sbjct: 360 FKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLK---- 415
Query: 416 AEDVDSMELATLTKNFSGAELEGLVR-AAQSTAMN 449
++DVD M +A T FSGA+L LV AA AM+
Sbjct: 416 SDDVDLMIIARGTPGFSGADLANLVNVAALKAAMD 450
Score = 32.3 bits (70), Expect = 1.7
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKY 587
VLL GPP +GKT LA +A + PF CS + F E + R+VR+ +
Sbjct: 266 VLLVGPPGTGKTMLARAIAGEAGVPFFS-CSGSE---FEEMFVGVGARRVRDLF 315
>04_04_0171 -
23282840-23283036,23283360-23283660,23283747-23284070,
23284678-23284698,23284877-23285788
Length = 584
Score = 113 bits (273), Expect = 4e-25
Identities = 76/213 (35%), Positives = 117/213 (54%), Gaps = 19/213 (8%)
Query: 241 EQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEANIRR 299
++LG K +G+LL GPPGTGKTL+AR + A P V+ + ++ +VG A +R
Sbjct: 323 KKLGAKLPRGVLLVGPPGTGKTLLARAVAG--EAGIPFFSVSASEFVEVFVGRGAARVRD 380
Query: 300 LFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQL 359
LF +A+E + II DE+DA+ +RG + D +NQLL+++DG D
Sbjct: 381 LFKEAKE--------AAPSIIFIDELDAVGGSRGRSFNDE--RDQTLNQLLTEMDGFDSD 430
Query: 360 NNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTK--RMREYKKIAE 417
++V+ TNR +D AL RPGR ++ +G+PD +GR IL +H + + E +I
Sbjct: 431 MKVIVMAATNRPKALDPALCRPGRFSRKVLVGVPDLEGRRNILAVHLRDVPLEEDPEIIC 490
Query: 418 DVDSMELATLTKNFSGAELEGLVRAAQSTAMNR 450
D+ +A+LT GA+L +V A A R
Sbjct: 491 DL----VASLTPGLVGADLANIVNEAALLAARR 519
Score = 33.1 bits (72), Expect = 0.99
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VLL GPP +GKT LA +A + PF V + E
Sbjct: 333 VLLVGPPGTGKTLLARAVAGEAGIPFFSVSASE 365
>01_05_0429 +
22070636-22070662,22071490-22071577,22071908-22072168,
22072925-22073161,22073251-22073375,22074093-22074569,
22074655-22075569
Length = 709
Score = 111 bits (268), Expect = 2e-24
Identities = 82/215 (38%), Positives = 115/215 (53%), Gaps = 18/215 (8%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEA 295
P+ LG K KG+LL GPPGTGKT++AR + A P +G + + +VG
Sbjct: 245 PKRFTHLGGKLPKGVLLVGPPGTGKTMLARAVAG--EAGVPFFSCSGSEFEEMFVGVGAR 302
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDG 355
+R LFA A++ C II DEIDAI +R + +NQLL ++DG
Sbjct: 303 RVRDLFAAAKKRSP-C-------IIFMDEIDAIGGSRNPK--DQQYMRMTLNQLLVELDG 352
Query: 356 VDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKI 415
Q I+VI TN +D+AL+RPGR + + + PD +GR QIL H ++ +
Sbjct: 353 FKQNEGIIVIAATNFPQSLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMLKVLK---- 408
Query: 416 AEDVDSMELATLTKNFSGAELEGLVR-AAQSTAMN 449
++DVD M +A T FSGA+L LV AA AM+
Sbjct: 409 SDDVDLMIIARGTPGFSGADLANLVNVAALKAAMD 443
Score = 31.9 bits (69), Expect = 2.3
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKY 587
VLL GPP +GKT LA +A + PF CS + F E + R+VR+ +
Sbjct: 259 VLLVGPPGTGKTMLARAVAGEAGVPFFS-CSGSE---FEEMFVGVGARRVRDLF 308
>01_05_0724 -
24612712-24612852,24612985-24613038,24613340-24613429,
24613499-24613780,24613926-24614119,24614379-24614508,
24614610-24614690,24614766-24614891,24615019-24615076,
24615319-24615380,24615753-24615803,24615946-24616065,
24616280-24616403,24616832-24616920,24617304-24617396,
24617910-24618063,24618673-24619178
Length = 784
Score = 108 bits (260), Expect = 2e-23
Identities = 75/208 (36%), Positives = 110/208 (52%), Gaps = 18/208 (8%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVN-GPQILDKYVGESEA 295
P +LG K KGILL G PGTGKTL+A+ I A P G + + +VG
Sbjct: 350 PSKFTRLGGKLPKGILLTGSPGTGKTLLAKAIAG--EAGVPFFYRAGSEFEEMFVGVGAR 407
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDG 355
+R LF A +++ C I+ DEIDA+ R G+T ++QLL ++DG
Sbjct: 408 RVRSLF-QAAKKKAPC-------IVFIDEIDAVGSTRKQWEGHT---KKTLHQLLVEMDG 456
Query: 356 VDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKI 415
+Q I+V+ TN D++D AL RPGR + + + PD +GR +IL ++ + K +
Sbjct: 457 FEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYL----QDKPV 512
Query: 416 AEDVDSMELATLTKNFSGAELEGLVRAA 443
+ DVD +A T F+GA+L LV A
Sbjct: 513 SSDVDVNAIARSTPGFNGADLANLVNIA 540
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 108 bits (259), Expect = 2e-23
Identities = 77/223 (34%), Positives = 119/223 (53%), Gaps = 18/223 (8%)
Query: 246 KHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAE 305
K +GILL+GPPGTGKT++A+ I A V+ I K+ GE E N+R LF+ A
Sbjct: 533 KPCRGILLFGPPGTGKTMLAKAIANDAGASFIN-VSMSTITSKWFGEDEKNVRALFSLA- 590
Query: 306 EEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNN--IL 363
A II DE+D++ R G + + + N+ +S DG+ + IL
Sbjct: 591 -------AKVAPTIIFVDEVDSMLGQRARCGEHEAMRK-IKNEFMSHWDGLLSKSGERIL 642
Query: 364 VIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSME 423
V+ TNR +DEA++R R E ++ +GLP R IL + + +K+AED+D E
Sbjct: 643 VLAATNRPFDLDEAIIR--RFERRIMVGLPTLDSRELIL----RTLLSKEKVAEDIDYKE 696
Query: 424 LATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAME 466
LAT+T+ +SG++L+ L A + L+K + E++ A E
Sbjct: 697 LATMTEGYSGSDLKNLCVTAAYRPVRELLKREREKEMERRANE 739
>01_06_0280 +
28129750-28129868,28130677-28131145,28133605-28133802,
28134168-28134412,28134749-28134907,28135491-28135578,
28135983-28136264
Length = 519
Score = 101 bits (242), Expect = 3e-21
Identities = 91/286 (31%), Positives = 144/286 (50%), Gaps = 32/286 (11%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+ GL +E + A ++ PE + + + KG+L++GPPGTGKTL+A+ +
Sbjct: 237 VAGL-SEAKRLLEEAVVLPLWMPEYFQGIR-RPWKGVLMFGPPGTGKTLLAKAVATECGT 294
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
V+ + K+ GESE +R LF + R A S I DEID++C +RG+
Sbjct: 295 TFFN-VSSATLASKWRGESERMVRCLF-----DLARFYAPS---TIFIDEIDSLCTSRGA 345
Query: 335 VGGNTGVHDTVVNQLLSKIDGVD--------QLNNILVIGMTNRRDMIDEALLRPGRLEV 386
G + V ++LL +IDGV+ Q ++V+ TN IDEAL R RLE
Sbjct: 346 SGEHESSR-RVKSELLVQIDGVNNSSTTEDGQPKIVMVLAATNFPWDIDEALRR--RLEK 402
Query: 387 QMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQST 446
++ I LP+ + R ++NI+ K + ++A DVD E+A T+ +SG +L + R A
Sbjct: 403 RIYIPLPNFESRKALININLKTV----EVATDVDIDEVARRTEGYSGDDLTNVCRDASMN 458
Query: 447 AMNRLIKASSKVEV---DPEAMEKLMVERTDFLHAL---ENDIKPA 486
M R I ++ E+ + + K V DF AL + + PA
Sbjct: 459 GMRRKIAGKTRDEIKNMSKDEISKDPVAMCDFEEALAKVQKSVSPA 504
>01_01_0886 -
6970112-6970225,6970357-6970473,6970567-6970635,
6970711-6970849,6970964-6971532,6971799-6971966,
6972097-6972184,6972260-6972818,6972924-6973024,
6973113-6973155,6973845-6973938,6974160-6974215,
6974460-6974581,6975306-6975517
Length = 816
Score = 99.1 bits (236), Expect = 1e-20
Identities = 72/218 (33%), Positives = 113/218 (51%), Gaps = 18/218 (8%)
Query: 246 KHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAE 305
K +GILL+GPPGTGKT++A+ I A V+ I K+ GE E N+R LF A
Sbjct: 540 KPCRGILLFGPPGTGKTMLAKAIANEAQASFIN-VSMSTITSKWFGEDEKNVRALFTLA- 597
Query: 306 EEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQL--NNIL 363
A II DE+D++ R G + + + N+ ++ DG+ IL
Sbjct: 598 -------AKVSPTIIFVDEVDSMLGQRNRAGEHEAMR-KIKNEFMTHWDGLLSRPDQKIL 649
Query: 364 VIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSME 423
V+ TNR +DEA++R R E ++ +GLP + R IL + + +K+ +D E
Sbjct: 650 VLAATNRPFDLDEAIIR--RFERRIMVGLPSLESRELIL----RSLLSKEKVDGGLDYKE 703
Query: 424 LATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVD 461
LAT+T+ +SG++L+ L A + LI+ K E++
Sbjct: 704 LATMTEGYSGSDLKNLCTTAAYRPVRELIQKERKKELE 741
Score = 29.9 bits (64), Expect = 9.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKV 562
+LL GPP +GKT LA +A + F+ V
Sbjct: 545 ILLFGPPGTGKTMLAKAIANEAQASFINV 573
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 92.3 bits (219), Expect = 2e-18
Identities = 66/224 (29%), Positives = 112/224 (50%), Gaps = 18/224 (8%)
Query: 246 KHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAE 305
K KGILL+GPPGTGKT++A+ + A I + I K+ GE E ++ +F+ A
Sbjct: 750 KPCKGILLFGPPGTGKTMLAKAVATEAGANFINI-SMSSIASKWFGEGEKYVKAVFSLA- 807
Query: 306 EEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV--DQLNNIL 363
+ +I DE+D + R + G + + + N+ + DG+ +L
Sbjct: 808 -------SKIAPSVIFVDEVDGMLGRRENPGEHEAMR-KMKNEFMVNWDGLRTKDKERVL 859
Query: 364 VIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSME 423
V+ TNR +DEA++R RL ++ + LPD R +IL++ + + +A+DVD
Sbjct: 860 VLAATNRPFDLDEAVVR--RLPRRLMVNLPDASNRKKILSVILAK----EDLADDVDLEA 913
Query: 424 LATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEK 467
LA LT +SG++++ L A + +++ K EA K
Sbjct: 914 LANLTDGYSGSDMKNLCVTAAHCPIREILEREKKERASAEAENK 957
>06_01_0860 -
6514921-6515034,6515125-6515196,6515344-6515400,
6515512-6515650,6515737-6515921,6516043-6516126,
6516552-6516674,6518043-6518219,6518331-6518400,
6518478-6518574,6519022-6519097,6519240-6519329,
6519548-6519655,6520715-6520756,6520854-6521045,
6521239-6521309,6521396-6521550,6521999-6522064,
6522769-6522820,6523476-6523566,6523897-6524094,
6524173-6524267,6524361-6524485,6524586-6525016
Length = 969
Score = 91.9 bits (218), Expect = 2e-18
Identities = 73/248 (29%), Positives = 126/248 (50%), Gaps = 20/248 (8%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
KGILL+GPPGTGKTL+A+ + A I G + K+ G++E + LF+ A
Sbjct: 715 KGILLFGPPGTGKTLLAKALATEAGANFISI-TGSNLTSKWFGDAEKLTKALFSFA---- 769
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNN--ILVIG 366
+ II DE+D++ ARG + + N+ ++ DG+ N IL++G
Sbjct: 770 ----SRLAPVIIFVDEVDSLLGARGGAFEHEATR-RMRNEFMAAWDGLRSKENQRILILG 824
Query: 367 MTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELAT 426
TNR +D+A++R RL ++ + LPD + R++IL I + + + D ELA
Sbjct: 825 ATNRPFDLDDAVIR--RLPRRIYVDLPDSQNRMKILKI----LLAKENLESDFRFDELAN 878
Query: 427 LTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVERTDFLHALENDIKPA 486
T+ +SG++L+ L AA ++ L++ K V + ++ DF+ A + + P+
Sbjct: 879 ATEGYSGSDLKNLCIAAAYRPVHELLE-EEKGGVSGTKISLRPLKLEDFVQA-KAKVSPS 936
Query: 487 FGTSAEAL 494
A ++
Sbjct: 937 VAFDATSM 944
>02_05_0752 +
31491462-31491921,31492177-31492271,31492346-31492573,
31493070-31493157,31493275-31493326,31493985-31494050,
31494382-31494536,31494633-31494703,31494820-31495017,
31495103-31495144,31496223-31496324,31496514-31496603,
31496708-31496783,31497299-31497395,31497488-31497557,
31497676-31497852,31498156-31498239,31498971-31499093,
31500143-31500226,31500318-31500502,31500592-31500730,
31500841-31500900,31500969-31501040,31501136-31501197,
31501839-31501945,31501984-31502058,31502800-31503248
Length = 1168
Score = 91.1 bits (216), Expect = 4e-18
Identities = 67/222 (30%), Positives = 117/222 (52%), Gaps = 20/222 (9%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANI 297
E+V++ C KG+LL+GPPGTGKTL+A+ + A I G + K+ G++E
Sbjct: 711 EIVKK--CLPCKGVLLFGPPGTGKTLLAKALATEAGANFISI-TGSTLTSKWFGDAEKLT 767
Query: 298 RRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV- 356
+ LF+ A + II DE+D++ ARG + + N+ ++ DG+
Sbjct: 768 KALFSFA--------SRLAPVIIFVDEVDSLLGARGGAFEHEATR-RMRNEFMAAWDGLR 818
Query: 357 -DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKI 415
+ IL++G TNR +D+A++R RL ++ + LPD + R++IL I + + +
Sbjct: 819 SKESQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDAQNRMKILKI----LLAKENL 872
Query: 416 AEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSK 457
D ELA T+ +SG++L+ L A+ ++ L++ K
Sbjct: 873 ESDFRFDELANSTEGYSGSDLKNLCIASAYRPVHELLEEEKK 914
>11_06_0634 - 25685216-25685329,25685407-25685511,25685681-25685740,
25685827-25685965,25686056-25686240,25686328-25686411,
25686499-25686621,25687088-25687267,25687364-25687433,
25687520-25687616,25687695-25687770,25688259-25688348,
25688383-25688529,25688647-25688715,25689004-25689177,
25689266-25689336,25689409-25689557,25690723-25690774,
25690865-25691120,25691196-25691287,25691420-25691541,
25691909-25692679,25692883-25692940,25693068-25693107,
25694462-25694595,25694685-25694793,25694896-25694991
Length = 1220
Score = 88.6 bits (210), Expect = 2e-17
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 18/214 (8%)
Query: 246 KHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAE 305
K KGILL+GPPGTGKT++A+ + A I + I K+ GE E ++ +F+ A
Sbjct: 951 KPCKGILLFGPPGTGKTMLAKAVATEAGANFINI-SMSSITSKWFGEGEKYVKAVFSLA- 1008
Query: 306 EEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV--DQLNNIL 363
+ +I DE+D++ R + G + + + N+ + DG+ +L
Sbjct: 1009 -------SKIAPSVIFIDEVDSMLGRRENPGEHEAMR-KMKNEFMVNWDGLRTKDKERVL 1060
Query: 364 VIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSME 423
V+G TNR +DEA++R R ++ + LPD R +IL + + +++A +D
Sbjct: 1061 VLGATNRPFDLDEAVIR--RFPRRLMVNLPDASNREKILKVILAK----EELAPGIDMDS 1114
Query: 424 LATLTKNFSGAELEGLVRAAQSTAMNRLIKASSK 457
LAT+T +SG++L+ L A + +++ K
Sbjct: 1115 LATMTDGYSGSDLKNLCVTAAHYPIREILEKEKK 1148
>03_02_0971 -
12807981-12808094,12808949-12809053,12809236-12809295,
12809399-12809537,12809648-12809832,12809926-12810009,
12810093-12810215,12810617-12810796,12811017-12811092,
12811178-12811277,12811355-12811430,12812155-12812244,
12812342-12812449,12813583-12813651,12813751-12813921,
12814002-12814072,12814263-12814360,12814659-12814719,
12814935-12814971,12815217-12815308,12815428-12815549,
12816281-12816414
Length = 764
Score = 88.6 bits (210), Expect = 2e-17
Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 18/221 (8%)
Query: 246 KHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAE 305
K KGILL+GPPGTGKT++A+ + A I + I K+ GE E ++ +F+ A
Sbjct: 495 KPCKGILLFGPPGTGKTMLAKAVATEAGANFINI-SMSSISSKWFGEGEKFVKAVFSLA- 552
Query: 306 EEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV--DQLNNIL 363
+ +I DE+D + R + G + + + N+ + DG+ +L
Sbjct: 553 -------SKIAPSVIFVDEVDGMLGRRENPGEHEAMR-KMKNEFMVNWDGLRTKDKERVL 604
Query: 364 VIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSME 423
V+ TNR +DEA++R RL ++ + LPD R +IL++ + + +A+DVD
Sbjct: 605 VLAATNRPFDLDEAVVR--RLPRRLMVNLPDASNRRKILSVILAK----EDLADDVDLEA 658
Query: 424 LATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEA 464
+A+LT+ +SG++L+ L A + +++ K + EA
Sbjct: 659 VASLTEGYSGSDLKNLCITAAHLPIKDILEKEKKEKALAEA 699
>01_05_0749 +
24890944-24891146,24891414-24891535,24891633-24891721,
24891813-24891848,24892268-24892367,24892524-24892566,
24892645-24892739,24892978-24893036,24893114-24893613,
24893691-24893772,24893864-24894429,24894520-24894655,
24894750-24894812,24894942-24895172,24895282-24895395
Length = 812
Score = 88.2 bits (209), Expect = 2e-17
Identities = 73/227 (32%), Positives = 116/227 (51%), Gaps = 22/227 (9%)
Query: 246 KHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAE 305
K KG+LL+GPPGTGKT++A+ + A I + + K+ GESE I+ LF+ A
Sbjct: 501 KPCKGVLLFGPPGTGKTMLAKALANAAGASFLNI-SMASMTSKWYGESEKCIQALFSLA- 558
Query: 306 EEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNN--IL 363
A II DE+D++ R + N V N+ ++ DG+ +N IL
Sbjct: 559 -------AKLAPAIIFIDEVDSMLGKRDNHSENEASR-RVKNEFMAHWDGLLSKSNERIL 610
Query: 364 VIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSME 423
V+ TNR +D+A++R R E ++ +GLP + R IL K+ E++D E
Sbjct: 611 VLAATNRPFDLDDAVIR--RFEHRIMVGLPTLESRELILKTLLS-----KETVENIDFKE 663
Query: 424 LATLTKNFSGAELEGL-VRAAQSTAMNRLIKASSKV--EVDPEAMEK 467
LA +T+ ++ ++L+ + V AA L K +KV E PE ++
Sbjct: 664 LAKMTEGYTSSDLKNICVTAAYHPVRELLQKEKNKVKKETAPETKQE 710
Score = 33.9 bits (74), Expect = 0.57
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVG--FTETAKCLQ 579
VLL GPP +GKT LA LA + F+ + S M + E+ KC+Q
Sbjct: 506 VLLFGPPGTGKTMLAKALANAAGASFLNI-SMASMTSKWYGESEKCIQ 552
>09_06_0271 + 21959213-21960559
Length = 448
Score = 87.4 bits (207), Expect = 4e-17
Identities = 78/240 (32%), Positives = 119/240 (49%), Gaps = 24/240 (10%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGG + + + R A + PE+ G +G+LL+GP GTGKT++A+ + + +A
Sbjct: 192 IGGCEAQKREV-REAVELPLTHPELFAAAGVDPPRGVLLHGPLGTGKTMLAKAVARETSA 250
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
+ VN + L ++ G +R LF R + I+ DE+DAI AR
Sbjct: 251 AFFR-VNAAE-LARHDGPRV--VRDLF--------RLARDMAPAIVFIDEVDAIAAARQG 298
Query: 333 --GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
GG V+ +LL+++DG D+ N+ VI TNR D +D ALLRPGRL+ ++E
Sbjct: 299 GDDDDGGARRHVQRVLIELLTQMDGFDESTNVRVIMATNRADDLDPALLRPGRLDRKVEF 358
Query: 391 GLPD--EKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAM 448
P+ E+ R+ +L T M + DVD LA S AE+ + R A A+
Sbjct: 359 TAPESPEEKRL-VLQTCTAGM----SLDGDVDLDALAARRDKLSAAEIAAVCRKAGMQAV 413
>01_01_0270 -
2225250-2225263,2225549-2225732,2225817-2225972,
2226276-2226374,2226489-2226563,2226682-2226750,
2226917-2227115,2227492-2227597,2228118-2228526
Length = 436
Score = 86.2 bits (204), Expect = 1e-16
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 16/216 (7%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
K LLYGPPGTGK+ +A + +++ I + ++ K++GESE + LF A E
Sbjct: 143 KAFLLYGPPGTGKSYLAEAVATEVDSTFFSI-SSSDLVSKWMGESEKLVANLFQMARE-- 199
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNN-ILVIGM 367
+ II DEID++C RG N + +LL ++ G D N+ +LV+
Sbjct: 200 ------NAPSIIFIDEIDSLCGQRGECNENEASR-RIKTELLVQMQGFDNSNDKVLVLAA 252
Query: 368 TNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATL 427
TN ++D+A+ R R + + I LPD K R IH + + + D + LA
Sbjct: 253 TNMPHVLDQAMRR--RFDKCIYIPLPDLKARKDTFKIH---IGDTPHSLTEGDFVSLAYQ 307
Query: 428 TKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPE 463
T+ FSG+++ V+ A + + A ++ D +
Sbjct: 308 TEGFSGSDIAVCVKDALFQPVRKTQDAKFFIKADDD 343
>06_01_0209 +
1587656-1587876,1587964-1588055,1590520-1590545,
1591130-1591370,1591459-1591554,1591639-1591754,
1591837-1591917,1592597-1592720,1593222-1593271,
1593735-1593825,1594386-1594421,1594502-1594602,
1594684-1594800
Length = 463
Score = 82.6 bits (195), Expect = 1e-15
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
+G+LL+GPPG GKT++A+ + A V+ + K+VGE+E +R LF A + +
Sbjct: 225 RGLLLFGPPGNGKTMLAKAVASESEATFFN-VSASSLTSKWVGEAEKLVRTLFMVAVDRQ 283
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNN--ILVIG 366
+I DEID++ AR + + ++ L + DGV + ++VIG
Sbjct: 284 P--------SVIFMDEIDSVMSAR--LANENDASRRLKSEFLIQFDGVTSNPDDLVIVIG 333
Query: 367 MTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELAT 426
TN+ +D+A+LR RL ++ + LPD R +L K + +K + D++ LA
Sbjct: 334 ATNKPQELDDAVLR--RLVKRIYVPLPDPNVRRLLLKTQLKG-QSFKLSSHDLE--RLAA 388
Query: 427 LTKNFSGAELEGLVRAAQSTAMNRL 451
T+ +SG++L L A + L
Sbjct: 389 DTEGYSGSDLRALCEEAAMMPIREL 413
>06_03_1386 +
29816744-29816941,29817030-29817330,29817421-29817579,
29818916-29819211,29819534-29819761
Length = 393
Score = 81.4 bits (192), Expect = 3e-15
Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 26/256 (10%)
Query: 203 IINPDW-DFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGK 261
+INPD D IGGLD+ A++ P KG+LLYGPPGTGK
Sbjct: 73 VINPDHIDVEFDSIGGLDHVKQALYELVILPLRRPELFTFGKLLSPQKGVLLYGPPGTGK 132
Query: 262 TLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIII 321
T++A+ I K A V ++ K+ G+++ + +F+ A + + II
Sbjct: 133 TMLAKAIAKESGAVFIN-VRISNLMSKWFGDAQKLVSAVFSLAHKLQPA--------IIF 183
Query: 322 FDEIDAICKARGSVGGNTGVHDTVVN---QLLSKIDG--VDQLNNILVIGMTNRRDMIDE 376
DE+D+ R T H+ + N + +S DG DQ ++V+ TNR +DE
Sbjct: 184 IDEVDSFLGQR-----RTTDHEAMTNMKTEFMSLWDGFTTDQNARVMVLAATNRPSELDE 238
Query: 377 ALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAEL 436
A+LR R EIG+P + R +IL + K + + +++ +A L + F+G+++
Sbjct: 239 AILR--RFTQIFEIGIPVQSERSKILRVVLKG----ENVEPNINYDYIAGLCEGFTGSDI 292
Query: 437 EGLVRAAQSTAMNRLI 452
L + A + L+
Sbjct: 293 LELCKQAAFYPIRELL 308
Score = 33.1 bits (72), Expect = 0.99
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKV 562
VLL GPP +GKT LA +AK S F+ V
Sbjct: 122 VLLYGPPGTGKTMLAKAIAKESGAVFINV 150
>02_01_0450 +
3234378-3234834,3235118-3235223,3235722-3235920,
3236119-3236187,3236299-3236373,3236484-3236582,
3236694-3236864,3237394-3237519
Length = 433
Score = 80.2 bits (189), Expect = 7e-15
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 18/228 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+ GLD A+ FP + K K LLYGPPGTGK+ +A+ + ++
Sbjct: 127 VSGLDGAKQALQEAVVLPVEFPQFFTGKR--KPWKAFLLYGPPGTGKSYLAKAVATEADS 184
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
I + +L K++GESE + LF A E + II DEID++C RG
Sbjct: 185 TFFSI-SSSDLLSKWMGESEKLVTNLFQMARE--------NAPSIIFIDEIDSLCGQRGE 235
Query: 335 VGGNTGVHDTVVNQLLSKIDGVDQLNN-ILVIGMTNRRDMIDEALLRPGRLEVQMEIGLP 393
G + V + L ++ GV ++ +LV+ TN +D+A+ R R + ++ I LP
Sbjct: 236 -GNESEASRRVKTEFLVQMQGVGHNDDKVLVLAATNTPYALDQAVRR--RFDKRIYIPLP 292
Query: 394 DEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVR 441
D K R + +H + + D LA T FSG+++ V+
Sbjct: 293 DLKARQHMFKVH---LGDTPHSLTKGDFESLARRTDGFSGSDIAVCVK 337
>01_01_0268 -
2214923-2215048,2215131-2215286,2215371-2215469,
2215557-2215631,2215732-2215800,2216515-2216713,
2220162-2220267,2221117-2221588
Length = 433
Score = 80.2 bits (189), Expect = 7e-15
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
+ LLYGPPGTGK+ +A+ + ++ I + ++ K++GESE + LF A E
Sbjct: 164 RAFLLYGPPGTGKSYLAKAVATEADSTFFSI-SSSDLVSKWMGESEKLVANLFQMARE-- 220
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNN-ILVIGM 367
+ II DEID++C RG G + + +LL ++ GV ++ +LV+
Sbjct: 221 ------NAPSIIFIDEIDSLCGQRGE-GNESEASRRIKTELLVQMQGVGHNDDKVLVLAA 273
Query: 368 TNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATL 427
TN +D+A+ R R + ++ I LPD K R + +H + + + D LA
Sbjct: 274 TNTPYALDQAVRR--RFDKRIYIPLPDLKARQHMFKVH---LGDTPHNLNESDFENLARR 328
Query: 428 TKNFSGAELEGLVR 441
T FSG+++ V+
Sbjct: 329 TDGFSGSDIAVCVK 342
>01_06_0763 +
31800556-31800618,31800659-31800802,31800859-31800980,
31801742-31801807,31801891-31801998,31802226-31802292,
31802716-31802800,31803169-31803329,31803490-31803591,
31803807-31804029,31804155-31804300
Length = 428
Score = 76.6 bits (180), Expect = 8e-14
Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 20/253 (7%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
KGILL+GPPGTGKT++A+ + I + I+ K+ G+SE ++ LF E
Sbjct: 178 KGILLFGPPGTGKTMLAKAVATECKTTFFNI-SASSIVSKWRGDSEKLVKVLF-----EL 231
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNN-ILVIGM 367
R A S I DEIDAI RG + +LL ++DG+ + N+ + V+
Sbjct: 232 ARHHAPS---TIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTKTNDLVFVLAA 288
Query: 368 TNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATL 427
TN +D A+LR RLE ++ + LP+ + R + ++ D L
Sbjct: 289 TNLPWELDAAMLR--RLEKRILVPLPEAEARHAMFEELLPSTTSKLEVPYDT----LVEK 342
Query: 428 TKNFSGAELEGLVRAAQSTAMNRL---IKASSKVEVDPEAMEKLMVERTDFLHALENDIK 484
T+ +SG+++ + + A + RL ++A ++ + E E ++ D AL N +
Sbjct: 343 TEGYSGSDIRLVCKEAAMQPLRRLMSVLEARDELVPEEELPEVGPLKPEDIEVALRN-TR 401
Query: 485 PAFGTSAEALEHF 497
P+ A E F
Sbjct: 402 PSAHLHAHRYEKF 414
>02_05_0693 -
30977323-30977421,30977783-30977843,30978874-30978996,
30979258-30979340,30979847-30979924,30980375-30980506,
30980685-30980728,30980966-30981090,30981468-30981769,
30981877-30981994,30982444-30982574,30983082-30983276,
30983362-30983646
Length = 591
Score = 70.5 bits (165), Expect = 5e-12
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 21/197 (10%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEANIRRLFADAEEE 307
+ +L GPPGTGKT AR I K A P + V I+ KY GESE + +F+ A +
Sbjct: 377 RAVLFEGPPGTGKTSSARVIAKQ--AGVPLLYVPLEIIMSKYYGESERLLGSVFSLANDL 434
Query: 308 EKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGM 367
+ G II DE+D+ AR S +++ +L +IDG +Q ++VI
Sbjct: 435 P-----DGG--IIFLDEVDSFASARDSEMHEATRR--ILSVILRQIDGFEQDRRVVVIAA 485
Query: 368 TNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATL 427
TNR++ +D AL+ R + + LPD++ R +I +Y K + + +
Sbjct: 486 TNRKEDLDPALI--SRFDSIICFDLPDQQTRAEI-------SAQYAKHLTKSELFQFSLA 536
Query: 428 TKNFSGAELEGLVRAAQ 444
T+ SG ++ + + A+
Sbjct: 537 TEEMSGRDIRDICQQAE 553
Score = 33.9 bits (74), Expect = 0.57
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 517 QLYIQQARAT----EASGLVSVLLEGPPNSGKTALAAQLAKLSDFPFVKV 562
++Y + ARAT E + +VL EGPP +GKT+ A +AK + P + V
Sbjct: 358 EVYDEIARATRCKFETNRPRAVLFEGPPGTGKTSSARVIAKQAGVPLLYV 407
>01_06_0221 -
27653591-27653724,27654270-27654473,27655216-27655315,
27655728-27655888,27656846-27656930,27657548-27657614,
27658434-27658541,27658639-27658704,27659341-27659387,
27659497-27659691,27659833-27659877
Length = 403
Score = 67.3 bits (157), Expect = 5e-11
Identities = 61/190 (32%), Positives = 91/190 (47%), Gaps = 14/190 (7%)
Query: 201 QSIINPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTG 260
+ II D I GL+N + + A + P+ + L KGILL+GPPGTG
Sbjct: 118 RDIIRGSPDVKWESIKGLENA-KRLLKEAVVMPIKYPKYFKGL-LSPWKGILLFGPPGTG 175
Query: 261 KTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHII 320
KT++A+ + I + I+ K+ G+SE ++ LF E R A S I
Sbjct: 176 KTMLAKAVATECKTTFFNI-SASSIVSKWRGDSEKLVKVLF-----ELARHHAPS---TI 226
Query: 321 IFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNN-ILVIGMTNRRDMIDEALL 379
DEIDAI RG + +LL ++DG+ + ++ + V+ TN +D A+L
Sbjct: 227 FLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTKTDDLVFVLAATNLPWELDAAML 286
Query: 380 RPGRLEVQME 389
R RLE Q E
Sbjct: 287 R--RLEKQQE 294
>04_04_0251 +
23930789-23930960,23931065-23931128,23931641-23931747,
23931832-23931899,23932068-23932097,23932357-23932460,
23932558-23932662,23932815-23932904,23932982-23933057,
23933292-23933361,23933799-23933869,23933945-23934035,
23934192-23934319,23934547-23934675,23934762-23934902
Length = 481
Score = 64.5 bits (150), Expect = 4e-10
Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
Query: 225 IFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAR--------E 276
+ R A ++ +F + V+ + +LL+GPPGTGKT + + + + L+ R +
Sbjct: 193 LLRYAASALLFTEKGVDPCLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFKSRYSMCQ 252
Query: 277 PKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVG 336
VN + K+ ES + +LF +E + S L ++ DE++++ AR +
Sbjct: 253 LIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEE---ESNLVFVLIDEVESLAAARQAAI 309
Query: 337 GNTGVHDT--VVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPD 394
+ D+ VVN LL+++D + N++++ +N ID A + R +++ +G P
Sbjct: 310 SGSEPSDSIRVVNALLTQMDKLKSWPNVIILTTSNITTAIDIAFV--DRADIKAYVGPPT 367
Query: 395 EKGRVQIL 402
+ R +IL
Sbjct: 368 LQARYEIL 375
>02_05_0459 +
29217728-29217919,29218095-29218190,29219785-29219895,
29219984-29220293,29220745-29220835,29220976-29221285,
29221469-29221617,29221914-29222418
Length = 587
Score = 56.4 bits (130), Expect = 9e-08
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
+ +L YGPPGTGKTL+AR++ + + G + E+ I ++F A++
Sbjct: 347 RNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGD--VAPLGSEAVTKIHQIFDWAKKSR 404
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMT 368
K G+ ++ DE DA R S + + +N LL + DQ +I+++ T
Sbjct: 405 K------GM-LLFIDEADAFLCERNST-HMSEAQRSALNALLFRTG--DQSRDIVLVLAT 454
Query: 369 NRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIH 405
NR +D A+ R++ +E LP E+ R Q+L ++
Sbjct: 455 NRPSDLDAAI--TDRIDEVIEFPLPGEEERFQLLRLY 489
>05_07_0306 - 29108860-29109282,29109425-29110441
Length = 479
Score = 52.8 bits (121), Expect = 1e-06
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 11/168 (6%)
Query: 242 QLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLF 301
++G +G LLYGPPGTGK+ + I M N + I + L+ +S +++RRL
Sbjct: 244 RIGRAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDIYD----LELTEVKSNSDLRRLL 296
Query: 302 ADAEEEEKRCGANSGLHIIIFDEIDA-ICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLN 360
+ I + + I +A+ + G ++ LL+ +DG+ +
Sbjct: 297 VGMSNRSILVVEDIDCTIDLQQRDEGEIKRAKPTYSGEENEDKVTLSGLLNFVDGLWSTS 356
Query: 361 NI--LVIGMTNRRDMIDEALLRPGRLEVQMEIG-LPDEKGRVQILNIH 405
+++ TN R+ +D ALLRPGR+++ + +G E RV N H
Sbjct: 357 GEERIIVFTTNYRERLDPALLRPGRMDMHIHMGYCTREAFRVLASNYH 404
>12_02_0277 + 16682836-16684368
Length = 510
Score = 48.4 bits (110), Expect = 2e-05
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 41/177 (23%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANI 297
E ++G +G LLYGPPGTGKT M IG M N + + + LD + A +
Sbjct: 233 EYHSKVGKAWKRGYLLYGPPGTGKTTM---IGAMANFLDYDVYD----LDLTSVKDNAEL 285
Query: 298 RRLFADAEEEEKRCGANSGLHIIIFDEIDAI-----CKARGSVGGNTGVHD--------- 343
R+LF D ++ II+ ++IDAI K +G N+ D
Sbjct: 286 RKLFLDTTDKS----------IIVIEDIDAIEVELTTKRKGKKMDNSDEVDNNHVLVELS 335
Query: 344 --------TVVNQLLSKIDGVDQL--NNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
++ LLS +DG+ + + + TN D +D AL+RPGR++ +E+
Sbjct: 336 NKTDDKSKVTLSGLLSFVDGLWSACGSERVFVFTTNHVDRLDPALIRPGRMDKHIEM 392
>12_02_0275 + 16662206-16663738
Length = 510
Score = 48.4 bits (110), Expect = 2e-05
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 41/177 (23%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANI 297
E ++G +G LLYGPPGTGKT M IG M N + + + LD + A +
Sbjct: 233 EYHSKVGKAWKRGYLLYGPPGTGKTTM---IGAMANFLDYDVYD----LDLTSVKDNAEL 285
Query: 298 RRLFADAEEEEKRCGANSGLHIIIFDEIDAI-----CKARGSVGGNTGVHD--------- 343
R+LF D ++ II+ ++IDAI K +G N+ D
Sbjct: 286 RKLFLDTTDKS----------IIVIEDIDAIEVELTTKRKGKKMDNSDEVDNNHVLVELS 335
Query: 344 --------TVVNQLLSKIDGVDQL--NNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
++ LLS +DG+ + + + TN D +D AL+RPGR++ +E+
Sbjct: 336 NKTDDKSKVTLSGLLSFVDGLWSACGSERVFVFTTNHVDRLDPALIRPGRMDKHIEM 392
>02_05_0405 +
28708077-28708391,28708478-28708573,28709030-28709450,
28710051-28710141,28710483-28710819,28710905-28711053,
28711782-28712295
Length = 640
Score = 48.4 bits (110), Expect = 2e-05
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 14/157 (8%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
+ +L YGPPGTGKT+ AR++ + + + ++ G + ++ I +LF A++
Sbjct: 397 RNMLFYGPPGTGKTMAARELARK-SGLDYALMTGGDVA-PLGSQAVTKIHQLFDWAKK-- 452
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMT 368
+N GL ++ DE DA R + + +N LL + DQ +I++ T
Sbjct: 453 ----SNRGL-LLFIDEADAFLCERNKT-YMSEAQRSALNALLFRTG--DQSKDIVLALAT 504
Query: 369 NRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIH 405
NR +D A+ R++ +E LP E R ++ ++
Sbjct: 505 NRPGDLDSAV--ADRIDEVLEFPLPGEDERSKLFKLY 539
>10_08_0645 - 19562886-19564484
Length = 532
Score = 47.2 bits (107), Expect = 6e-05
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 31/251 (12%)
Query: 218 LDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREP 277
+D E A R S + +LG + LLYGP GTGK+ A + + L
Sbjct: 210 MDPELKARVRADLESFLKGRAYYHRLGRAWRRSYLLYGPSGTGKSTFAAAMARFL----- 264
Query: 278 KIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGG 337
V +D G + ++R L + +I+ +++D RG G
Sbjct: 265 --VYDVYDIDMSRGGCD-DLRALLLETTPRS----------LILVEDLDRYL--RGGGDG 309
Query: 338 NTGVHDTVVNQLLSKIDGVDQL---NNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPD 394
T T +++LS +DG+ ++V M+ +D +D A+LRPGRL+V + + D
Sbjct: 310 ETSAART--SRMLSFMDGLSSCCGEERVMVFTMSGDKDGVDPAILRPGRLDVHIHFTMCD 367
Query: 395 EKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLV---RAAQSTAMNRL 451
+G + L + ++++K + + A S AEL ++ R + S A+ +
Sbjct: 368 FEG-FKTLASNYLGLKDHKLYPQVEEGFHAA--GARLSPAELGEIMLANRGSPSRALRTV 424
Query: 452 IKASSKVEVDP 462
I A V P
Sbjct: 425 INALQHVAPAP 435
>12_02_0291 + 16951154-16952740
Length = 528
Score = 46.8 bits (106), Expect = 8e-05
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 41/177 (23%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANI 297
E ++G +G LL+GPPGTGK+ M IG M N + + + LD ++ + +
Sbjct: 233 EYHSKVGKAWKRGYLLHGPPGTGKSTM---IGAMANFLDYDVYD----LDLTSVKNNSEL 285
Query: 298 RRLFADAEEEEKRCGANSGLHIIIFDEIDAI-----CKARGSVGGN-TGVHD-------- 343
R+LF D ++ II+ ++IDAI K +G N +HD
Sbjct: 286 RKLFLDTTDKS----------IIVIEDIDAIEVELTTKRKGKKAANGDEIHDKRMLIEFS 335
Query: 344 --------TVVNQLLSKIDGVDQL--NNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
++ LLS +DG+ + + + TN D +D AL+RPGR++ +E+
Sbjct: 336 DKNDEKSKVTLSGLLSFVDGLWSACGSERIFMFTTNHIDRLDPALIRPGRMDKHIEM 392
>05_07_0307 - 29111643-29112104,29112222-29113214
Length = 484
Score = 46.8 bits (106), Expect = 8e-05
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 241 EQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRL 300
+++G +G LLYGPPGTGK+ + I M N + I + L+ S + +RRL
Sbjct: 235 KRIGKAWKRGYLLYGPPGTGKSSL---IAAMANHLKFDIYD----LELTGVHSNSELRRL 287
Query: 301 FADAEEEEKRCGANSGLHIIIFD-EIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQL 359
+ I + E S + G ++ LL+ +DG+
Sbjct: 288 LVGMTSRSILVVEDIDCSIELKQREAGEERTKSNSTEEDKGEDKVTLSGLLNFVDGLWST 347
Query: 360 NNI--LVIGMTNRRDMIDEALLRPGRLEVQMEIG-LPDEKGRVQILNIHT 406
+ +++ TN ++ +D+AL+RPGR+++ + +G E R+ N H+
Sbjct: 348 SGEERIIVFTTNYKERLDQALMRPGRMDMHIHMGYCTPEAFRILASNYHS 397
>06_03_1259 - 28800954-28802468
Length = 504
Score = 45.6 bits (103), Expect = 2e-04
Identities = 36/153 (23%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 249 KGILLYGPPGTGKTLMARQIGKML--NAREPKIVNGP------QILDKYVGESEANIRRL 300
+G LL+GPPGTGKT + I +L + + ++ P ++L +S + +
Sbjct: 256 RGYLLHGPPGTGKTSLVAAIANLLEFDVYDLELTTVPTNSHLRRLLVSTTPKSVVVVEDI 315
Query: 301 FADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV--DQ 358
+ +++ A+ + ++ I A + G ++ +L+ +DG+
Sbjct: 316 DCSLDLSDRKNKASDDENAA---QLSIISPAAAAAMAAMGRESISLSGVLNFVDGLWSSC 372
Query: 359 LNNILVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
+ L++ TN + +D ALLRPGR++ ++E+G
Sbjct: 373 VGERLMVFTTNHPERLDPALLRPGRMDRKIELG 405
Score = 31.9 bits (69), Expect = 2.3
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDF 557
LL GPP +GKT+L A +A L +F
Sbjct: 259 LLHGPPGTGKTSLVAAIANLLEF 281
>01_05_0631 + 23835120-23836109,23836204-23836674
Length = 486
Score = 45.2 bits (102), Expect = 2e-04
Identities = 63/256 (24%), Positives = 116/256 (45%), Gaps = 36/256 (14%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANI 297
E +++G +G LLYGPPGTGK+ + I M N + + + L+ + +
Sbjct: 236 EYYKKIGKAWKRGYLLYGPPGTGKSSL---IAAMANYLKFDVYD----LELTEVNWNSTL 288
Query: 298 RRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGG------NTGVHDTVVNQLLS 351
RRL I++ ++ID + + G N ++ LL+
Sbjct: 289 RRLLIGMTNRS----------ILVIEDIDCTLELQQREEGQESSKSNPSEDKVTLSGLLN 338
Query: 352 KIDGVDQLNNI--LVIGMTNRRDMIDEALLRPGRLEVQMEIG-LPDEKGRVQILNIHT-K 407
+DG+ + +++ TN ++ +D ALLRPGR+++ + +G E R+ N H+
Sbjct: 339 FVDGLWSTSGEERIIVFTTNYKERLDPALLRPGRMDMHVHMGYCCPESFRILASNYHSID 398
Query: 408 RMREYKKIAEDVDSM-----ELA-TLTKN-FSGAELEGLVR-AAQSTAMNRLIKASSKVE 459
Y +I E + + E+A L +N + LEGL++ + + + KA + +
Sbjct: 399 NHATYPEIEELIKEVMVTPAEVAEVLMRNDDTDVALEGLIQFLKRKKDVGKEGKAENVEQ 458
Query: 460 -VDPEAMEKLMVERTD 474
V E EK M+++ D
Sbjct: 459 VVKAEETEKGMMKKND 474
>02_02_0522 -
11161385-11161537,11162513-11162668,11164176-11164298,
11164404-11164466,11164512-11164577,11165128-11165232,
11165336-11165435,11165520-11165590,11166037-11166093,
11167215-11167292,11167367-11167441,11168490-11168540,
11169015-11169094,11169560-11169660,11169749-11169810,
11170084-11170590
Length = 615
Score = 44.8 bits (101), Expect = 3e-04
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 251 ILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDK--YVGES-EANIRRLFADAEEE 307
IL+ GP G+GKTL+A+ + + +N P ++ L + YVGE E+ + +L A A+ +
Sbjct: 215 ILVMGPTGSGKTLLAKTLARFVNV--PFVIADATTLTQAGYVGEDVESILYKLLAAADFD 272
Query: 308 EKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKI 353
A G I+ DE+D I K S+ + V V Q L K+
Sbjct: 273 V--AAAQQG--IVYIDEVDKITKKAESINLSRDVSGEGVQQALLKM 314
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 533 SVLLEGPPNSGKTALAAQLAKLSDFPFV 560
++L+ GP SGKT LA LA+ + PFV
Sbjct: 214 NILVMGPTGSGKTLLAKTLARFVNVPFV 241
>01_06_0035 + 25782410-25783384,25784130-25784696
Length = 513
Score = 44.4 bits (100), Expect = 4e-04
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 32/167 (19%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVG--ESEA 295
E E+ G +G L++GPPGTGK+ + I L + D +G S
Sbjct: 228 EYYERTGRAWKRGYLIHGPPGTGKSSLVAAISNHLRF---------DVYDLELGGVRSNT 278
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKA---RGSVGGNTGVHDTVVNQ---- 348
+R+L + I++ +++D A R GG G + VN+
Sbjct: 279 ELRKLLIRMKNRS----------ILLIEDVDCAVVAAPRREPHGGPDGSNPPSVNRKVTL 328
Query: 349 --LLSKIDGV--DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
LL+ +DG+ + ++I T D +D+ALLRPGR+++ + +G
Sbjct: 329 SGLLNMVDGLWSSSGHERILIFTTTHVDRLDQALLRPGRMDMHVHMG 375
>12_02_0289 - 16914975-16916238,16916246-16916484
Length = 500
Score = 44.0 bits (99), Expect = 5e-04
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 38/174 (21%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANI 297
E ++G +G LL+GPPGTGKT M IG M N + + + LD + A++
Sbjct: 227 EYHSKVGKAWKRGYLLHGPPGTGKTTM---IGAMANFLDYDVYD----LDLISVLNNADL 279
Query: 298 RRLFADAEEEEKRCGANSGLHIIIFDEIDAI-----CKARGSVGGN-------TGVHD-- 343
R+LF D ++ II+ ++IDAI +G N G+ D
Sbjct: 280 RKLFLDTTDKS----------IIVIEDIDAIEVELTTNRKGKKAANGDDKHVVIGLSDKN 329
Query: 344 -----TVVNQLLSKIDGVDQL--NNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
++ LL+ IDG+ + + + TN D +D AL R GR+++ +E+
Sbjct: 330 HDKSKVTLSGLLNFIDGLWSACGSERIFVFTTNHVDHLDPALTRRGRMDMDIEM 383
>03_06_0343 + 33274329-33274981,33275197-33276121
Length = 525
Score = 44.0 bits (99), Expect = 5e-04
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 249 KGILLYGPPGTGKT----LMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADA 304
+G LL+GPPGTGK+ MA +G + E V+ L K + ++ + + D
Sbjct: 286 RGYLLHGPPGTGKSTMVAAMANYLGYDVYDMELTSVHTNTDLRKLLIQTTSKSIIVIEDV 345
Query: 305 EEEEKRCGANSGLHIIIFDEIDAICKA-----RGSVGGNTGVHDTV-VNQLLSKIDGVDQ 358
+ G D+ DA RG GG G V ++ LL+ IDG+
Sbjct: 346 DCSSNLTGRRKATGDGEDDDDDAKTTTKKVIDRGGGGGGVGGDSKVTLSGLLNFIDGLWS 405
Query: 359 L--NNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIH 405
L++ TN + +D AL+R GR++ ++E+ D + + IH
Sbjct: 406 AFGEERLIVLTTNHVEDLDPALIRTGRMDKKIEMSYCDFETFKSMAKIH 454
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 42.7 bits (96), Expect = 0.001
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKI------VNGPQILDKYVGESEAN-IRRLF 301
K +LL GPPG GKT A+ + +ML + ++ ++K VG S +N I+ L
Sbjct: 451 KAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELI 510
Query: 302 ADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKI 353
++A +++ DE+D + S G GV D + + +SKI
Sbjct: 511 SNATLNYSNNRLKRPKAVLVMDEVDGM-----SAGDRGGVADLIASIKMSKI 557
>12_02_0122 + 13923510-13925081
Length = 523
Score = 41.5 bits (93), Expect = 0.003
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 249 KGILLYGPPGTGKTLMARQIGKML-----NAREPKIVNGPQILDKYV---GESEANIRRL 300
+G LLYGPPGTGK+ M + L + + N ++ Y+ G+S I +
Sbjct: 246 RGYLLYGPPGTGKSTMIAAMANFLDYDVYDLELTAVKNNTELRKLYIETTGKSIIVIEDI 305
Query: 301 --FADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQ 358
D + K+ ++ + D K + G ++ LL+ IDG+
Sbjct: 306 DCSIDLTGKRKKSSGDNKASDGGGEGSDDKPKLPTEADKDDGGSKVTLSGLLNFIDGLWS 365
Query: 359 L--NNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
++I TN ++ +D AL+R GR++V +E+
Sbjct: 366 ACGGERIIIFTTNHKEKLDPALIRRGRMDVHIEM 399
>12_02_1267 - 27448871-27450445
Length = 524
Score = 40.3 bits (90), Expect = 0.007
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLN-----AREPKIVNGPQILDKYV---GESEANIRRL 300
+G LL+GPPGTGK+ M + L+ + + Y+ G+S I +
Sbjct: 245 RGYLLHGPPGTGKSTMIAAMANFLDYDVYDLELTAVKTNTDLRKLYIETTGKSIIVIEDI 304
Query: 301 FADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQL- 359
+ KR +N DE D + ++ LL+ IDG+
Sbjct: 305 DCSVDLTAKR--SNDKKKKKSSDEDDDDKPKLPTEQEKDEASKVTLSGLLNFIDGLWSAC 362
Query: 360 -NNILVIGMTNRRDMIDEALLRPGRLEVQMEIG-LPDEKGRV---QILNIHTKRM-REYK 413
++I TN ++ +D AL+R GR++V +E+ E +V L + M E +
Sbjct: 363 GGERIIIFTTNHKEKLDPALIRRGRMDVHIEMSYCRFEAFKVLAKNYLGVEQHEMFVEIR 422
Query: 414 KIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVE 471
++ E++D M A + +N +G R + + LI+A +K +V+ K E
Sbjct: 423 RLLEEID-MSPADVAENLMPKASKGKKRDPDA-CLAGLIEALNKAKVEAAEAAKAKEE 478
>07_01_0670 + 5030971-5032698
Length = 575
Score = 39.9 bits (89), Expect = 0.009
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANI 297
E + G +G LL+GPPGTGK+ M + M N + I + ++ V + N+
Sbjct: 263 EFYRRTGKPWKRGYLLHGPPGTGKSTM---VAAMANYLDYDIYD----VELTVVGNNNNL 315
Query: 298 RRLFADAEEEEKRCGANSGLHI-IIFDEIDAICKARGSV--GGNTGVHDTVVNQLLSKID 354
R+L + + + + I D + S G + D ++ LL+ ID
Sbjct: 316 RKLLIETTSKSIIVIEDIDCSLDITGDRAARRSRPPPSYRDGHDRRSSDVTLSGLLNFID 375
Query: 355 GVDQL--NNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
G+ +V+ TN D +D AL+R GR+++ +E+
Sbjct: 376 GLWSACGGERIVVFTTNHLDKLDPALIRRGRMDMHIEM 413
>12_02_1268 + 27458823-27460046
Length = 407
Score = 39.1 bits (87), Expect = 0.015
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 35/160 (21%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
+G LL+GPPGTGK+ M I M N + + + L+ ES +RRLF +
Sbjct: 146 RGYLLFGPPGTGKSTM---IAAMANFLDYDVYD----LELTAVESNTELRRLFIE----- 193
Query: 309 KRCGANSGLHIIIFDEIDAICKARGS----------------VGGNTGVHDTVVNQLLSK 352
+G II+ ++ID G + ++ LL+
Sbjct: 194 -----TTGKSIIVIEDIDCSIDLTGKRKKKKKDKKKKKMMPPSDDDDEEKKVTLSGLLNF 248
Query: 353 IDGVDQL--NNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
IDG+ ++I TN ++ +D AL+R GR+++ +E+
Sbjct: 249 IDGLWSACGGERIIIFTTNHKEKLDPALIRRGRMDMHIEM 288
>07_01_0671 + 5036069-5037670
Length = 533
Score = 39.1 bits (87), Expect = 0.015
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANI 297
E + G +G LL+GPPGTGK+ M I M N + I + ++ + ++
Sbjct: 271 EFYRRAGKPWKRGYLLHGPPGTGKSTM---IASMANYLDYDIYD----VELTMVSDNNDL 323
Query: 298 RRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVD 357
R+L E K + + D + G + G G ++ LL+ IDG+
Sbjct: 324 RKLL--IETTSKSIVVIEDIDCSLDLTGDRATRRPGEIRG--GGSMVTLSGLLNFIDGLW 379
Query: 358 QLN--NILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
+ +V+ TN + +D AL+R GR+++ +E+
Sbjct: 380 SASGGERVVVFTTNHVEKLDPALIRRGRMDMHIEM 414
>09_04_0308 +
16567361-16568854,16568946-16569068,16569372-16569649,
16570316-16571924,16572363-16573781
Length = 1640
Score = 38.7 bits (86), Expect = 0.020
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 16/188 (8%)
Query: 218 LDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLN---- 273
LD E A + E + G +G LL+GPPG+GK+ + + L
Sbjct: 215 LDPELKARLLADLTAFADGSEFYRRTGRPWKRGYLLHGPPGSGKSSLIAAMANHLRYDVF 274
Query: 274 ----AREPKIVNGPQILDKYVGESEANIR----RLFADAEEEEKRCGANSGLHIIIFDEI 325
R + +L + S I L + + +R LH +
Sbjct: 275 DLELTRVATNADLRALLIQTTNRSLIVIEDIDCSLHLTGDRKSRRNKRRRLLHATAASDD 334
Query: 326 DAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQL--NNILVIGMTNRRDMIDEALLRPGR 383
D+ S GG+ ++ LL+ DG+ +++ TN D ID ALLRPGR
Sbjct: 335 DS--SDSDSDGGDNHRSKVTLSGLLNFTDGLWSCCGEERIIVFTTNHVDGIDPALLRPGR 392
Query: 384 LEVQMEIG 391
++V + +G
Sbjct: 393 MDVHVRLG 400
>03_01_0100 - 791425-792996
Length = 523
Score = 38.3 bits (85), Expect = 0.026
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 26/156 (16%)
Query: 242 QLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLF 301
+LG + LLYGP GTGK+ A + + L G I D V S A L
Sbjct: 225 RLGRVWRRSYLLYGPLGTGKSTFAAAMARFL---------GYDIYD--VDLSRAGSDDLR 273
Query: 302 ADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQL-- 359
A R +I+ +++D + GG G + ++LS +DGV
Sbjct: 274 ALLLHTTPRS-------LILVEDLDRFLQ-----GGGAGDAEARAARVLSFMDGVASCCG 321
Query: 360 -NNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPD 394
++V M ++ +D A++RPGRL+V + L D
Sbjct: 322 EERVMVFTMRGGKEGVDAAVVRPGRLDVHIHFTLCD 357
>02_05_0415 +
28787353-28787496,28787658-28788204,28788297-28788392,
28788532-28788645,28788929-28789962,28790053-28790124
Length = 668
Score = 37.9 bits (84), Expect = 0.035
Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 1/141 (0%)
Query: 306 EEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVI 365
E E A H + E+ A+CK G T Q L +DGVD++ +
Sbjct: 2 EVEAATAAAMDFHALSRRELQALCKRNGVRANMTNAAMADALQSLPTVDGVDEIGTAALC 61
Query: 366 GMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELA 425
T R + AL + + + G P +GR ++ + + +R + ED +L
Sbjct: 62 LPTPSRSTMKSALKAAAAIGEEQQHGSPLPRGR-RVSVMSPEAIRLDVEEGEDEMKRDLV 120
Query: 426 TLTKNFSGAELEGLVRAAQST 446
G L R A++T
Sbjct: 121 KEIVRTPGVALRSTSRRARAT 141
>07_03_1756 -
29239137-29239325,29239741-29240259,29240693-29240800,
29240856-29241155,29241730-29241831,29243042-29243209,
29243878-29243991,29244184-29244288,29244372-29244502,
29244794-29244918,29245001-29245172,29245277-29245316,
29245636-29245722,29245803-29245868,29246412-29246510,
29246714-29246836,29247066-29247107,29247195-29247260,
29247362-29247553,29247672-29247737,29248839-29249141
Length = 1038
Score = 36.7 bits (81), Expect = 0.081
Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 16/198 (8%)
Query: 244 GCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEANIRRLFA 302
G K I L GPPG GKT + R I + LN + + V G + + G + +
Sbjct: 457 GTSQGKIICLSGPPGVGKTSIGRSIARALNRKFYRFSVGGLADVAEIKGHRRTYVGAMPG 516
Query: 303 DAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGV------HDTVVNQLLSKIDGV 356
+ K G + L ++ DEID + RG G + VN L +D
Sbjct: 517 KMVQCLKSVGTANPL--VLIDEIDKL--GRGHSGDPASALLELLDPEQNVNFLDHYLDVP 572
Query: 357 DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIG-LPDEKGRV--QILNIHTKRMREYK 413
L+ +L + N +MI LL R+E+ G + DEK + L +T+ K
Sbjct: 573 IDLSKVLFVCTANVIEMIPNPLL--DRMEIIAIAGYITDEKMHIARDYLEKNTREACGIK 630
Query: 414 KIAEDVDSMELATLTKNF 431
+V L L +++
Sbjct: 631 PEQAEVTDAALLALIESY 648
>06_03_1258 + 28796643-28798169
Length = 508
Score = 36.7 bits (81), Expect = 0.081
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 349 LLSKIDGV--DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
+L+ +DG+ + LV+ TN D +D ALLRPGR++ ++E+G
Sbjct: 384 VLNFVDGLWSSCVGERLVVFTTNHTDRLDPALLRPGRMDRKVELG 428
Score = 33.1 bits (72), Expect = 0.99
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 249 KGILLYGPPGTGKTLMARQIGKML 272
+G LL+GPPGTGKT + I +L
Sbjct: 265 RGYLLHGPPGTGKTSLVAAIANLL 288
Score = 31.9 bits (69), Expect = 2.3
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDF 557
LL GPP +GKT+L A +A L +F
Sbjct: 268 LLHGPPGTGKTSLVAAIANLLEF 290
>02_05_0922 -
32742863-32742958,32743081-32743136,32743253-32743382,
32743768-32743849,32744038-32744227,32744290-32744369,
32744769-32744985,32745740-32745923
Length = 344
Score = 36.7 bits (81), Expect = 0.081
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 251 ILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEA--NIRRLFAD-AEEE 307
+LLYGPPGTGKT + + L + G IL+ + +R+ D A
Sbjct: 74 LLLYGPPGTGKTSTILAVARKLYGSQ----YGNMILELNASDERGIDVVRQQIQDFASAR 129
Query: 308 EKRCGANSGLHIIIFDEIDAICK 330
GA + +++ DE DA+ K
Sbjct: 130 SLSFGAKQSVKMVLLDEADAMTK 152
>07_03_0607 +
19916946-19917479,19917543-19918010,19918092-19918479,
19919025-19919076,19919294-19919333
Length = 493
Score = 36.3 bits (80), Expect = 0.11
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 25/176 (14%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKT----LMARQIGKMLNAREPKIVNGPQILDKY-VGE 292
E ++G +G LL+GPPGTGK+ MA Q+ L + V+ L + +G
Sbjct: 214 EYYRRIGKAWKRGYLLHGPPGTGKSSLVAAMANQLRFNLYDLDLSEVHSNSALQRLLIGM 273
Query: 293 SEA------NIRRLFADAEEEEKR--------CGANSGLHIIIFDEIDAICKARGSVGGN 338
NI F+ E+ + C + G +DE + + G+ +
Sbjct: 274 PNRTILVIENIDCCFSARSREDGKDRKTPPAVCYGDGGGD---YDEDEYYEEDEGNWRDD 330
Query: 339 TGVHDTV-VNQLLSKIDGVDQLNNI--LVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
++ ++ LL+ IDG+ + +++ TN +D +D ALLRPGR+++ + +G
Sbjct: 331 FSEKQSLTLSGLLNFIDGLWSTSGEERVIVFTTNYKDRLDAALLRPGRMDMHIYMG 386
>07_03_0605 + 19908541-19909605,19909703-19910092
Length = 484
Score = 36.3 bits (80), Expect = 0.11
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 43/180 (23%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANI 297
E ++G +G LL+GPPGTGK+ + + M N + + LD S + +
Sbjct: 244 EYYRRIGKAWKRGYLLHGPPGTGKSSL---VAAMANHLRFNLYD----LDLSEVHSNSAL 296
Query: 298 RRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQ--------- 348
+RL RC I+I ++ID AR G T+ N
Sbjct: 297 QRLLIGMTN---RC-------ILIVEDIDCCFSARSREDGKERKKPTLTNNDGGGGDDDD 346
Query: 349 ---------------LLSKIDGVDQLNNI--LVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
LL+ IDG+ + +++ TN +D +D ALLRPGR+++ + +G
Sbjct: 347 DEGDDFSEKRLTLSGLLNFIDGLWSTSGEERVIVFTTNYKDRLDAALLRPGRMDMHVYMG 406
>03_05_0157 - 21346104-21347693
Length = 529
Score = 36.3 bits (80), Expect = 0.11
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 19/173 (10%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKML-------NAREPKIVNGPQ-ILDKY 289
E ++G +G LL+GPPGTGK+ + + L + E ++ Q +L
Sbjct: 269 EYYRRIGKAWKRGYLLHGPPGTGKSSLVAAMANYLRFNLYDLDLSEVRVNAALQRLLISM 328
Query: 290 VGESEANIRRLFA--DAEEEEKRCGANSGLH------IIIFDEIDAI-CKARGSVGGNTG 340
+S I + DA E + L D DA+ R G+
Sbjct: 329 PNKSILVIEDIDCCFDANPREAHKITTAALDQAEDFDFSSSDSDDAVGAPPRARRAGDLQ 388
Query: 341 VHDTVVNQLLSKIDGVDQLNNI--LVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
++ LL+ IDG+ + +++ TN ++ +D ALLRPGR+++ + +G
Sbjct: 389 QQKLTLSGLLNFIDGLWSTSGEERVIVFTTNYKERLDPALLRPGRMDMHVYMG 441
>01_02_0077 + 10889048-10889082,10890243-10890605,10890680-10891619
Length = 445
Score = 36.3 bits (80), Expect = 0.11
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 18/152 (11%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
+G LL+GPPGTGK+ M I M N + I + ++ V + ++RRL + +
Sbjct: 187 RGYLLHGPPGTGKSTM---IAAMANYLDYDIYD----VELTVVKDNNDLRRLLIETTSKS 239
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVG---GNTGVHD-----TVVNQLLSKIDGVDQL- 359
+ + + + A + RG + HD ++ LL+ IDG+
Sbjct: 240 IIVIEDIDCSLDLTGD-RAATQRRGRQNDRDDGSRRHDRDGSMVTLSGLLNFIDGLWSAC 298
Query: 360 -NNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
+V+ TN D +D AL+R GR+++++E+
Sbjct: 299 GGERIVVFTTNHVDKLDAALIRRGRMDMRIEM 330
>05_06_0196 +
26293889-26294122,26294317-26294375,26294454-26294554,
26294638-26294717,26294856-26294906,26295225-26295299,
26295386-26295463,26295700-26295756,26296226-26296296,
26296395-26296494,26296574-26296678,26296763-26296825,
26296940-26297062,26297129-26297193,26297352-26297358
Length = 422
Score = 35.9 bits (79), Expect = 0.14
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 533 SVLLEGPPNSGKTALAAQLAKLSDFPFV 560
++LL GP SGKT LA LA+ +D PFV
Sbjct: 122 NILLIGPTGSGKTLLAKTLARFADVPFV 149
Score = 31.1 bits (67), Expect = 4.0
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 251 ILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDK--YVGES-EANIRRLFADAEEE 307
ILL GP G+GKTL+A+ + + A P ++ + + Y GE E+ I L A A+
Sbjct: 123 ILLIGPTGSGKTLLAKTLARF--ADVPFVIADATAITQAGYSGEDVESIICNLLAAAKFN 180
Query: 308 EKRCGANSGLHIIIFDEIDAICK 330
+ G I+ DE+D + K
Sbjct: 181 VE--ATERG--IVYIDEVDKLIK 199
>03_01_0417 -
3197956-3198438,3198550-3200001,3200116-3200277,
3200351-3201133
Length = 959
Score = 35.5 bits (78), Expect = 0.19
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 243 LGCKHVKGILLYGPPGTGKTL 263
LGC+ V ++YGPPGTGKT+
Sbjct: 407 LGCRGVAPYVIYGPPGTGKTM 427
>07_01_0672 - 5041742-5043175
Length = 477
Score = 35.1 bits (77), Expect = 0.25
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 242 QLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLF 301
++G +G LL+GPPGTGK+ M I M N + I + ++ + ++RRLF
Sbjct: 238 RIGKAWKRGYLLHGPPGTGKSTM---IAAMANYLDYDIYD----VELTSVATNTDLRRLF 290
Query: 302 ADAEE------EEKRCGAN-SGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKID 354
+ + E+ C + +G A + ++ LL+ ID
Sbjct: 291 IETKGKSIIVIEDIDCSVDLTGKRKKRSPHAAAAAAEPVDAAKDESASKVTLSGLLNVID 350
Query: 355 GVDQL--NNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
G+ +V+ TN +D AL+R GR++ +E+
Sbjct: 351 GLWSACGGERIVVFTTNHVGKLDPALIRRGRMDKHIEM 388
>03_02_0741 -
10857656-10857844,10858315-10858848,10859516-10859824,
10860521-10860622,10861446-10861613,10862734-10862847,
10863003-10863107,10863206-10863336,10863680-10863804,
10863890-10864061,10864411-10864505,10864771-10864841,
10864923-10865009,10865119-10865184,10865401-10865499,
10866631-10866672,10866757-10866822,10866910-10867101,
10867224-10867289,10868473-10868811
Length = 1023
Score = 35.1 bits (77), Expect = 0.25
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 14/161 (8%)
Query: 244 GCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEANIRRLFA 302
G K I L GPPG GKT + R + + LN + + V G + + G + +
Sbjct: 470 GSSQGKIICLCGPPGVGKTSIGRSVARALNRKFYRFSVGGLSDIAEIKGHRRTYVGAMPG 529
Query: 303 DAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGV------HDTVVNQLLSKIDGV 356
+ K G ++ L ++ DEID + RG G + N L +D
Sbjct: 530 KMVQCLKSVGTSNPL--VLIDEIDKL--GRGYSGDPASALLELLDPEQNANFLDHYLDVP 585
Query: 357 DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIG-LPDEK 396
L+ +L + N +MI LL R+E+ G + DEK
Sbjct: 586 IDLSKVLFVCTANVIEMIPGPLL--DRMEIITIAGYITDEK 624
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 34.7 bits (76), Expect = 0.33
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 239 VVEQLGCKHVKGI-LLYGPPGTGKTLMARQIG-KMLNAR 275
++ + GC H + L++GPPGTGKT +A + MLN R
Sbjct: 418 IMSKAGCHHNHSVDLVWGPPGTGKTRLAAGLAICMLNLR 456
>02_02_0371 -
9513742-9514293,9514784-9514923,9515217-9515556,
9515659-9515721,9515812-9515910,9516016-9516126,
9517114-9517257
Length = 482
Score = 34.7 bits (76), Expect = 0.33
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 255 GPPGTGKTLMARQIGKMLN----AREPKI--VNGPQILDKYVGESEANIRRLFADAE 305
G PGTGKT++AR +GK+L+ K+ V ++ ++VG + RR DAE
Sbjct: 248 GNPGTGKTMVARILGKLLHMVGVLPTDKVTEVQRTDLVGEFVGHTGPKTRRKIQDAE 304
>09_04_0220 - 15813809-15815380
Length = 523
Score = 33.9 bits (74), Expect = 0.57
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 12/160 (7%)
Query: 241 EQLGCKHVKGILLYGPPGTGKT----LMARQIGKMLNAREPKIVNG----PQILDKYVGE 292
E+ G +G LLYGPPGTGK+ MA +G + E V ++L K +
Sbjct: 231 ERTGRAWKRGYLLYGPPGTGKSSMIAAMANHLGYDVYDLELTEVGSNAELRKLLMKTTSK 290
Query: 293 SEANIRRLFADAEEEEKRCGANSGLHIIIFDEID--AICKARGSVGGNTGVHDTVVNQLL 350
S I + + + A + ID AI + + ++ LL
Sbjct: 291 SIIVIEDIDCSVDLTNRATAAAAAQPPKPRASIDGGAIDQDAAAAPAGAAARSITLSGLL 350
Query: 351 SKIDGVDQL--NNILVIGMTNRRDMIDEALLRPGRLEVQM 388
+ DG+ + + + TN + +D ALLR GR+++ +
Sbjct: 351 NFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHI 390
>06_01_0608 - 4399252-4399894,4401640-4402427
Length = 476
Score = 33.9 bits (74), Expect = 0.57
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREP 277
+ +LL G PGTGKT +A I K L A P
Sbjct: 68 RAVLLAGQPGTGKTALAMGIAKSLGAETP 96
Score = 33.1 bits (72), Expect = 0.99
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 518 LYIQQARATEASGLVSVLLEGPPNSGKTALAAQLAKL--SDFPFVKVCSPE 566
L +Q R + +G +VLL G P +GKTALA +AK ++ PF V + E
Sbjct: 55 LILQLIRQGKIAGR-AVLLAGQPGTGKTALAMGIAKSLGAETPFASVAASE 104
>02_04_0271 +
21445113-21445865,21446727-21446788,21446927-21447027,
21447165-21447248,21448054-21448058,21448193-21448267,
21448339-21448416,21448896-21448952,21449351-21449421,
21449529-21449628,21449758-21449862,21450004-21450066,
21450144-21450266,21450371-21450514,21450598-21450672
Length = 631
Score = 33.5 bits (73), Expect = 0.75
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 533 SVLLEGPPNSGKTALAAQLAKLSDFPFV 560
+VLL GP SGKT LA LA+ + PFV
Sbjct: 296 NVLLMGPTGSGKTLLAKTLARFVNVPFV 323
Score = 31.5 bits (68), Expect = 3.0
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 17/103 (16%)
Query: 251 ILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKR 310
+LL GP G+GKTL+A+ + + +N P ++ L + ++ N++
Sbjct: 297 VLLMGPTGSGKTLLAKTLARFVNV--PFVIADATTLTQASRVADFNVQ------------ 342
Query: 311 CGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKI 353
A G+ + DE+D I K S+ + V V Q L K+
Sbjct: 343 -AAQQGM--VYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 382
>06_01_0400 +
2862684-2862872,2862956-2863170,2863298-2863448,
2863566-2863757,2864471-2864633,2864754-2864989,
2865446-2865622,2865707-2865826,2865939-2866241
Length = 581
Score = 33.1 bits (72), Expect = 0.99
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 251 ILLYGPPGTGKTLMARQIGKML 272
+LL GPPG GKT + R+I +ML
Sbjct: 120 LLLIGPPGVGKTTVIREIARML 141
>05_06_0166 +
26093618-26095381,26095820-26096039,26096345-26096674,
26097481-26098029,26098366-26098426,26099737-26099824,
26100240-26100299
Length = 1023
Score = 33.1 bits (72), Expect = 0.99
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 252 LLYGPPGTGKTLMARQIGKMLNAREPK 278
+ YGP GTGKT AR K LN P+
Sbjct: 392 VFYGPHGTGKTSCARVFAKALNCHSPE 418
>01_06_0595 -
30485460-30486097,30486721-30487179,30487339-30487558,
30488229-30489980
Length = 1022
Score = 33.1 bits (72), Expect = 0.99
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 252 LLYGPPGTGKTLMARQIGKMLNAREPK 278
+ YGP GTGKT AR K LN P+
Sbjct: 388 VFYGPHGTGKTSCARVFAKALNCHSPE 414
>12_02_1269 + 27462644-27463612
Length = 322
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANI 297
E +G +G LL+GPPGTGK+ M + L+ G L+ +S +
Sbjct: 209 EYYASVGKAWKRGYLLFGPPGTGKSTMIAAMANFLD-------YGVYDLELTAVKSNTEL 261
Query: 298 RRLFAD 303
RRLF +
Sbjct: 262 RRLFIE 267
>12_02_1017 +
25339515-25339548,25339689-25339837,25339932-25339990,
25340665-25340742,25341155-25341347,25341424-25341454,
25341534-25341592,25341674-25341747,25342228-25342314,
25342353-25342379,25342522-25342583,25342676-25342704,
25343037-25343129
Length = 324
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 240 VEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAR-EPKIVNGPQIL 286
+E L K++ GI GPPG GK+ +A ++ + +N R K NG ++
Sbjct: 101 IEHLDSKYIVGIA--GPPGAGKSTVASEVVQRVNKRWSQKHENGSSLI 146
>10_06_0151 + 11276554-11276916,11277020-11277403
Length = 248
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 349 LLSKIDGVDQLNNI--LVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
LL+ IDG+ + +++ TN R+ +D ALLRPGR++ + +G
Sbjct: 131 LLNFIDGLWSTSGEERVIVFTTNYRERLDPALLRPGRMDKHVYMG 175
>01_06_1273 +
35896320-35896400,35896548-35896736,35897817-35897948,
35898093-35898242,35898564-35898719,35899462-35899596,
35899706-35899771,35900016-35900122,35900258-35900357,
35900436-35900527,35901026-35901095,35901229-35901318
Length = 455
Score = 32.7 bits (71), Expect = 1.3
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 239 VVEQLGCKHVKG--ILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEA 295
VV+ + K + G +LL GPP TGKT +A I + L ++ P + G ++ V ++E
Sbjct: 52 VVDMIRQKKMAGRALLLAGPPATGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEV 111
Query: 296 ---NIRRLFADAEEEEK 309
N RR +E K
Sbjct: 112 LMENFRRAIGLRIKENK 128
Score = 29.9 bits (64), Expect = 9.3
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 14/62 (22%)
Query: 519 YIQQARATEASGLV------------SVLLEGPPNSGKTALAAQLAKL--SDFPFVKVCS 564
++ QA A EA+GLV ++LL GPP +GKTALA +++ S PF +
Sbjct: 39 FVGQAAAREAAGLVVDMIRQKKMAGRALLLAGPPATGKTALALGISQELGSKVPFCPMVG 98
Query: 565 PE 566
E
Sbjct: 99 SE 100
>12_02_0295 + 17006064-17007063,17007068-17007666
Length = 532
Score = 32.3 bits (70), Expect = 1.7
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 17/91 (18%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANI 297
E ++G +G LL G PGTGK+ M IG M N + + + LD ++ + +
Sbjct: 233 EYHSKVGKAWKRGYLLRGLPGTGKSTM---IGAMANFLDYDVYD----LDLISVKNNSEL 285
Query: 298 RRLFADAEEEEKRCGANSGLHIIIFDEIDAI 328
R+LF D ++ II+ ++IDAI
Sbjct: 286 RKLFLDTTDKS----------IIVIEDIDAI 306
>12_01_0777 -
7095081-7096259,7096636-7096725,7096827-7096902,
7097150-7097367,7097502-7097717,7097922-7098107,
7098181-7098303,7098399-7098514,7099254-7099832,
7101485-7101517,7102485-7103679,7103732-7103797,
7104843-7104905,7105328-7105411
Length = 1407
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 239 VVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNARE-PKIVNGPQIL----------D 287
VV+ LG + L G PG GKT +A + + ++ + P+ + G +++
Sbjct: 769 VVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISTGDVPETIEGKKVITLDMGLLVAGT 828
Query: 288 KYVGESEANIRRLFADAEEEEK 309
KY GE E +++L + ++ ++
Sbjct: 829 KYRGEFEERLKKLMEEIKQSDE 850
>04_04_0012 + 22145111-22146388
Length = 425
Score = 32.3 bits (70), Expect = 1.7
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 5/150 (3%)
Query: 350 LSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRM 409
++KI G +L L M LR R+E ++ L + + + L + T +
Sbjct: 99 VAKIPGTSELQISLCKEMVEWTRAEKRTFLRQ-RVEARLAALLLENQEYTEALTLLTGLI 157
Query: 410 REYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLM 469
+E +++ + + +++ L + L L +A S R A++ + V P A + +
Sbjct: 158 KEVRRLDDKLLLVDIDLLESKLHFS-LRNLPKAKASLTAART--AANAIYVPP-AQQGTI 213
Query: 470 VERTDFLHALENDIKPAFGTSAEALEHFLA 499
++ LHA E D K A+ EA E F A
Sbjct: 214 DLQSGILHAEEKDYKTAYSYFFEAFEAFSA 243
>02_04_0114 +
19879468-19880671,19882007-19882179,19882265-19882605,
19882698-19882977,19883070-19883267,19883380-19883652
Length = 822
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 245 CKHVKG-ILLYGPPGTGKTLMARQIGKMLNARE-PKIVNGPQILDKYVGESEA--NIRRL 300
C+ K +L G PG GKT +A + + + A + P + G ++++ VG A R +
Sbjct: 213 CRRTKNSAVLVGAPGVGKTAIAEGLARRVAAGDVPAALAGARVVELDVGSLVAGTQYRGM 272
Query: 301 FAD-AEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGN 338
F + ++ + +G I+ DE+ + A GG+
Sbjct: 273 FEERVKKVIQEAEGAAGKVILFIDEMHMLLGAGACKGGS 311
>07_01_0564 -
4183441-4183530,4183683-4183752,4183972-4184063,
4184141-4184240,4184372-4184478,4184703-4184768,
4184879-4185013,4185653-4185808,4186113-4186262,
4186426-4186557,4187604-4187693
Length = 395
Score = 31.9 bits (69), Expect = 2.3
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEA---NIRRLFADA 304
+ +LL GPP TGKT +A I + L ++ P + G ++ V ++E N RR
Sbjct: 4 RALLLAGPPATGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLR 63
Query: 305 EEEEK 309
+E K
Sbjct: 64 IKENK 68
>03_06_0342 + 33268971-33270533
Length = 520
Score = 31.9 bits (69), Expect = 2.3
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 11/152 (7%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAR----EPKIVNGPQILDKYVGESEANIRRLFADA 304
+G LL+GPPGTGK+ M + L+ E V+ L K E+ + + D
Sbjct: 269 RGYLLHGPPGTGKSAMIAAMANYLDYDIYDIELTSVHSNTDLRKLFIETTSKSIIVIEDI 328
Query: 305 EEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHD----TVVNQLLSKIDGVDQL- 359
+ GA D+ D K G+ D ++ LL+ IDG+
Sbjct: 329 DCSLDLTGARKKKKEAA-DDDDGGSKDGGAPPKPDMKKDASSKVTLSGLLNFIDGLWSAC 387
Query: 360 -NNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
L++ TN +D AL+R GR++ +E+
Sbjct: 388 GGERLIVFTTNHVKKLDPALIRRGRMDKHIEM 419
>12_01_0647 - 5485100-5487028
Length = 642
Score = 31.5 bits (68), Expect = 3.0
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 16/148 (10%)
Query: 411 EYKKIAEDVDSMELATLTKNFSGAE--LEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKL 468
EY K+ E E+ L FS + + + + ST + RL KA +E+ A
Sbjct: 94 EYYKLREKAKEQEVCELGSYFSKMKQVVTNFLTDSDST-LERLRKAIEDLEIVTSADAAH 152
Query: 469 MVERTDFLHALENDIKPA---FGTSAEALEHFLARG-----IVNWGSPVSSIFEDGQLYI 520
++ RT + H L+ + P G + E R IV W ++ + DG
Sbjct: 153 LMGRTTYSHVLDTHVLPQDRETGFTPEVPNKMFGRDKEMEMIVQW--LINPL--DGNAET 208
Query: 521 QQARATEASGLVSVLLEGPPNSGKTALA 548
Q + +T + + L GP GKTALA
Sbjct: 209 QVS-STNPMHVPVMSLVGPCGMGKTALA 235
>07_01_0665 + 5001599-5003149
Length = 516
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 238 EVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLN 273
E ++G +G LL+GPPGTGK+ M + L+
Sbjct: 255 EYYARVGRAWKRGYLLHGPPGTGKSTMIAAMANYLD 290
>02_02_0042 - 6297211-6297981
Length = 256
Score = 31.5 bits (68), Expect = 3.0
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 783 MSYEDALLSNSFDVINLEELPAATRSYDSDSSLKPETPRLLEYID 827
MSY+ +L ++ F V+ ELP R+YD SS P + L+ D
Sbjct: 191 MSYQSSLRTSPFRVVYCHELP-TLRAYDPSSSRLPAVQQTLQERD 234
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 31.1 bits (67), Expect = 4.0
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VLL+GP +SGKT+L LA + FV++ + E
Sbjct: 929 VLLQGPTSSGKTSLVRFLAAQTGHEFVRINNHE 961
>04_04_1340 + 32766773-32767582
Length = 269
Score = 31.1 bits (67), Expect = 4.0
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 757 SPSFSEMADSGRYTEEASSSHIDIVAMSYEDALLSNSFDVINLEELPAATRSYDS-DSSL 815
SPS + +A G+ ++H+ + + E A L SF ++ E + R ++ ++ +
Sbjct: 128 SPSLTGLARGGQQVAACRAAHVKAIEVLVELASLQTSFLTLD-EAIKTTNRRVNALENVV 186
Query: 816 KPETPRLLEYIDSNSDSSDTE 836
KP + YI D + E
Sbjct: 187 KPRLENTISYIKGELDELERE 207
>12_01_0489 +
3872495-3872538,3872663-3872741,3872835-3872914,
3873888-3874007,3874090-3874159,3874238-3874311,
3874393-3874513,3874600-3874662,3874748-3874807,
3875156-3875281,3875358-3875441,3875912-3876010
Length = 339
Score = 30.7 bits (66), Expect = 5.3
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 251 ILLYGPPGTGKTLMARQIGKMLNARE---PKIVNGPQILDKYVGESEANIRRLFADAEEE 307
+L YGPPGTGKT A I L E +++ D+ + I+ A A
Sbjct: 45 MLFYGPPGTGKTTTALAIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGS 104
Query: 308 EKRCGANSGLH-IIIFDEIDAI 328
++ G + III DE D++
Sbjct: 105 ARKGGYPCPPYKIIILDEADSM 126
>11_06_0562 +
25003246-25003746,25004975-25005214,25005576-25006097,
25006184-25007248,25007350-25007656,25007761-25008001,
25008104-25008302,25008771-25008852,25008959-25009209,
25010061-25010219,25010220-25010603
Length = 1316
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDFPFVKV--CSPE-DMVGF-TETAKCL 578
L++GPP SGKT + L ++ +KV C+P+ ++V F T KCL
Sbjct: 468 LIQGPPGSGKTEITIALLQVLHHMNLKVLLCAPKTNIVKFLTNLDKCL 515
>07_01_0478 - 3605306-3605614,3605766-3605906
Length = 149
Score = 30.7 bits (66), Expect = 5.3
Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 8/126 (6%)
Query: 324 EIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGR 383
E+ A+CK T T QLL +DG+ +++ + T R + AL
Sbjct: 19 ELQAMCKRNDGHANMTNATMTDALQLLPSVDGIHKIDTTALCLPTPSRLTMKSALKAASA 78
Query: 384 L--EVQMEIGLPDEKG-RVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLV 440
+ E Q + G P +G RV + ++ +M E D M+ +N G L
Sbjct: 79 VGEEEQQQHGSPLPRGRRVSVKSLEAIQM----DFEEGEDEMKRDREERNL-GVALRSTS 133
Query: 441 RAAQST 446
R A++T
Sbjct: 134 RRARAT 139
>04_04_1035 +
30283456-30283536,30284823-30285359,30285508-30286512,
30286718-30287042,30287563-30287818,30287901-30288117,
30288743-30289095,30289330-30289833,30291267-30292467,
30292614-30292970,30293258-30293495,30294083-30295125,
30295234-30296649,30296731-30296855,30297036-30297314,
30297352-30297382,30298957-30299022,30299447-30299689,
30299848-30299898,30299980-30300071,30300182-30300249,
30300515-30300600,30300720-30300824,30300994-30301127,
30302403-30302436,30302620-30302892,30303019-30303288,
30303384-30303974,30304065-30304214
Length = 3376
Score = 30.7 bits (66), Expect = 5.3
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 239 VVEQLGCKHVKGI-LLYGPPGTGKT 262
V+ + C+H+ + L++GPPGTGKT
Sbjct: 234 VISAVQCRHLNLMKLIWGPPGTGKT 258
>04_03_0784 -
19610370-19611548,19611830-19611919,19612001-19612076,
19612917-19613134,19613333-19613548,19613974-19614159,
19614242-19614364,19614456-19614571,19615126-19615588
Length = 888
Score = 30.7 bits (66), Expect = 5.3
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 239 VVEQLGCKHVKGILLYGPPGTGKTLMARQIGKML-NAREPKIVNGPQIL----------D 287
V + LG + L G PG GKT +A + + + N P+ + G +++
Sbjct: 250 VTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLDMGLLVAGT 309
Query: 288 KYVGESEANIRRLFADAEEEE 308
KY GE E +++L + ++ +
Sbjct: 310 KYRGEFEERLKKLMEEIKQND 330
>09_06_0067 -
20645012-20645095,20645365-20645466,20645583-20645828,
20646042-20646236,20646343-20646636,20646952-20647134,
20647534-20647593,20647796-20648002,20648081-20648282,
20648367-20648494,20648759-20648842,20648955-20649134,
20649281-20649372,20649620-20649789,20650226-20650337,
20650451-20650554,20651262-20651371
Length = 850
Score = 30.3 bits (65), Expect = 7.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 255 GPPGTGKTLMARQIGKMLNAREPKIVNG 282
GPPG GKT +A I K LN + +I G
Sbjct: 408 GPPGVGKTSLASSIAKALNRKFIRISLG 435
>06_03_0499 +
21461608-21463427,21463517-21463627,21463867-21464143,
21464265-21464353,21464508-21464595,21464698-21464907,
21464985-21465110,21465429-21465620,21466532-21467188
Length = 1189
Score = 30.3 bits (65), Expect = 7.0
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 441 RAAQSTAMNRLIKASS--KVEVDPEAMEKLMVERTDFLHALENDIKPAF 487
+AA+ + M+++ S K+E DP+A L+++ ALE+D+K F
Sbjct: 795 KAAKESLMSQIANGSQMVKLEKDPDAAFALVIDGKALTFALEDDMKHMF 843
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 29.9 bits (64), Expect = 9.3
Identities = 26/125 (20%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 240 VEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRR 299
+E + KH + I + LM +++ L+A + V + ++GE EA ++R
Sbjct: 798 LENIVAKHTQDIHVLREKNVSTELMIKELHHELDALKELNVKLESEMGLHIGEKEA-LQR 856
Query: 300 LFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQL 359
FA +EE++ G+H + +E+ + K+R + ++N L ++ +++
Sbjct: 857 DFACQKEEKQNL---EGIHHSLAEEMSTL-KSRSAANQKLIEDLQIMNLKLKEVCAKNEV 912
Query: 360 NNILV 364
L+
Sbjct: 913 EKALL 917
>06_03_1175 + 28168007-28170058
Length = 683
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 833 SDTETCDLDSRTHPLTPLNFILSDDDHT 860
+DT TCD D+R PL P ++ D+ T
Sbjct: 462 NDTATCDADARATPLPPEALLIPFDNRT 489
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 29.9 bits (64), Expect = 9.3
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 242 QLGCKHVKGI-LLYGPPGTGKTLMARQIG-KMLNAREPKIVNGPQILDKYVGESEANIRR 299
Q+ C+ K ++ G PG GKT +A + +++ P+ + +++ +G A +
Sbjct: 346 QILCRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPEPLQNRKLISLDMGALLAGAK- 404
Query: 300 LFADAEEEE-----KRCGANSGLHIIIFDEIDAICKARGSVGG 337
F EE K A++G I+ DEI I A G+ GG
Sbjct: 405 -FQGQFEERLKAVLKEITASNGQIILFIDEIHTIVGA-GAAGG 445
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.133 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,179,630
Number of Sequences: 37544
Number of extensions: 1003509
Number of successful extensions: 3092
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2660
Number of HSP's gapped (non-prelim): 295
length of query: 878
length of database: 14,793,348
effective HSP length: 88
effective length of query: 790
effective length of database: 11,489,476
effective search space: 9076686040
effective search space used: 9076686040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)
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