Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000447-TA|BGIBMGA000447-PA|IPR003960|AAA-protein
subdomain, IPR003593|AAA ATPase, IPR009010|Aspartate
decarboxylase-like fold, IPR003338|AAA ATPase VAT, N-terminal,
IPR004201|Cell division protein 48, CDC48, domain 2, IPR003959|AAA
ATPase, central region
(878 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_732| Best HMM Match : AAA (HMM E-Value=0) 374 e-103
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 4e-34
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 140 6e-33
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 1e-31
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 1e-31
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 135 2e-31
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 134 4e-31
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 130 5e-30
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 6e-29
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 123 7e-28
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 120 5e-27
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 119 9e-27
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 97 4e-20
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 94 4e-19
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 3e-17
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 71 5e-12
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 5e-11
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 67 5e-11
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 6e-09
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-07
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 9e-07
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 47 8e-05
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 0.001
SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.004
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 40 0.007
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 38 0.035
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 34 0.57
SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0) 33 0.76
SB_46289| Best HMM Match : DUF1690 (HMM E-Value=0.32) 33 0.76
SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.00
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 33 1.3
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 33 1.3
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 32 1.7
SB_57545| Best HMM Match : zf-C3HC4 (HMM E-Value=0.023) 32 2.3
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.3
SB_2807| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.3
SB_47595| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31) 31 3.1
SB_7302| Best HMM Match : DUF910 (HMM E-Value=2.2) 31 3.1
SB_41548| Best HMM Match : ResIII (HMM E-Value=0.27) 31 4.0
SB_44585| Best HMM Match : DeoC (HMM E-Value=3.7e-13) 31 4.0
SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.0
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 31 4.0
SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) 31 5.3
SB_56566| Best HMM Match : Ank (HMM E-Value=0) 30 7.0
SB_16493| Best HMM Match : NACHT (HMM E-Value=1.1e-08) 30 9.3
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 30 9.3
SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08) 30 9.3
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 9.3
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 374 bits (919), Expect = e-103
Identities = 177/235 (75%), Positives = 211/235 (89%), Gaps = 1/235 (0%)
Query: 220 NEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI 279
NEF+ I RRAFA+R+FP +VV+++G KHVKGILL+GPPGTGKTLMARQIG MLN REPKI
Sbjct: 154 NEFSNIVRRAFATRLFPADVVDKMGLKHVKGILLFGPPGTGKTLMARQIGTMLNTREPKI 213
Query: 280 VNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVG-GN 338
++GP++L+K+VGESEANIR+LFA+AEEE+KR G NS LH+IIFDE DA+CK+R S G
Sbjct: 214 ISGPEVLNKFVGESEANIRKLFAEAEEEQKRFGDNSALHLIIFDEFDAVCKSRYSYNTGG 273
Query: 339 TGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGR 398
TGV D+VVNQLL+KIDGV+QLNN+L+IGMTNRRD+ID+ALLRPGRLEVQ+EIGLPDE+GR
Sbjct: 274 TGVQDSVVNQLLAKIDGVEQLNNVLLIGMTNRRDLIDDALLRPGRLEVQVEIGLPDEEGR 333
Query: 399 VQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIK 453
VQIL IHT +MRE K +A+DVD ELAT TKNF+GAE+EGLVRAAQSTAMNR IK
Sbjct: 334 VQILKIHTAKMRENKVLADDVDLAELATQTKNFTGAEIEGLVRAAQSTAMNRFIK 388
Score = 104 bits (249), Expect = 4e-22
Identities = 53/163 (32%), Positives = 96/163 (58%), Gaps = 17/163 (10%)
Query: 1 MKAAKCPSDELAITNCALIHQDDFPSD-IKHIEVSTGPSQHFVFSIRFYNGVDRGTVGFS 59
+K AKCPSD+L+++NC +++++D ++ +KH+EV TG + F+F+ + + +G+ GFS
Sbjct: 4 LKVAKCPSDKLSLSNCLIVNENDLNAEKVKHVEVRTGGPKGFIFTTMVSDDIPQGSAGFS 63
Query: 60 APQRKWATLSIGQTIDVKPFKPSSAECLCSVTLEADFMMKKTTSTDPYDSEQMARDFLIQ 119
QRKW ++S+ ID + + + D YD+++MA F
Sbjct: 64 LIQRKWTSVSLNSYIDG----------------DTRIVWVHRPTQDAYDTDKMAAYFTDI 107
Query: 120 FANQVFTVGQQLAFLFQEKKVLSLIVKNLEAVDVVALAAGANA 162
F + F++GQQ+ F F +KK+L L++K++E +DV L A + +
Sbjct: 108 FFDHAFSLGQQVPFGFHDKKLLLLVIKSMEVIDVGLLRAASES 150
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 144 bits (348), Expect = 4e-34
Identities = 88/220 (40%), Positives = 126/220 (57%), Gaps = 14/220 (6%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
PE ++LG + +GIL+YGPPG KTL+AR + I GP++ K+VGESE
Sbjct: 560 PEAFQRLGIRPPRGILMYGPPGCSKTLIARALATESGLNFIAI-KGPELFSKWVGESEKA 618
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV 356
+R +F A R A S I+ FDE+DAI R S GG+ V+D V+ QLL+++DGV
Sbjct: 619 VREVFLKA-----RATAPS---IVFFDELDAIAGQRNSTGGSD-VNDRVLTQLLTELDGV 669
Query: 357 DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIA 416
+ L +++ I TNR DMID+AL+RPGR++ + + LP R IL IH R
Sbjct: 670 ETLKDVIFIAATNRPDMIDKALMRPGRVDRLIYVPLPCWDTRRHILEIHLAR----TPCE 725
Query: 417 EDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASS 456
+D +L T+ +SGAE+ + R A A+ I+A S
Sbjct: 726 GSLDLEDLVERTEGYSGAEIAAVCREAALAALQENIQAES 765
Score = 129 bits (312), Expect = 8e-30
Identities = 111/386 (28%), Positives = 172/386 (44%), Gaps = 35/386 (9%)
Query: 199 PRQSIINPDWDFGK----MGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLY 254
P S+I D + K IGGL + A+ R + PE+ G +GILLY
Sbjct: 238 PFGSVIKKDSEAKKGVSFQSIGGLKTQIQAV-REMIEMPLTNPELFTAYGVPPPRGILLY 296
Query: 255 GPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGAN 314
GP GTGKT++AR + +NGP++L +Y GE+EA +R +F +A+ N
Sbjct: 297 GPSGTGKTMIARAVANETGVHF-FCINGPEVLSRYYGETEARLREIFTEAQ--------N 347
Query: 315 SGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNN---ILVIGMTNRR 371
I+ DE+DA+C R V VV LL+ +DG+ + ++V+ TNR
Sbjct: 348 KSPSIVFIDELDALCPRRDKVQNE--FERRVVATLLTLMDGMHMKSTDTYVMVLAATNRP 405
Query: 372 DMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNF 431
D +D AL RPGR + ++EIG+P R IL ++ D D LA +
Sbjct: 406 DALDPALRRPGRFDREIEIGIPSVTDRRDIL---VTLLKNVPHSLHDEDISSLAESAHGY 462
Query: 432 SGAELEGLVRAAQSTAMNRLI------KASSKVEVDPEAMEKLMVERTDFLHALENDIKP 485
GA+L + A A R + + S + D +L+V D + A ++P
Sbjct: 463 VGADLAAACKEASLYAFKRSLHNHDNGSSQSLEQRDARIKRELLVSSED-MRAAFRCVRP 521
Query: 486 AFGTSAEALEHFLARGIVNWGSPV--SSIFEDGQLYIQQARATEASGL---VSVLLEGPP 540
+ ALE G+ + + E + ++ A + G+ +L+ GPP
Sbjct: 522 S-AMREVALEVPKVHWSDVGGNEMIKRKLKEAVEWPLKHPEAFQRLGIRPPRGILMYGPP 580
Query: 541 NSGKTALAAQLAKLSDFPFVKVCSPE 566
KT +A LA S F+ + PE
Sbjct: 581 GCSKTLIARALATESGLNFIAIKGPE 606
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 140 bits (338), Expect = 6e-33
Identities = 85/219 (38%), Positives = 124/219 (56%), Gaps = 17/219 (7%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEA 295
P+ +LG K KG +L GPPGTGKTL+A+ + A P + ++G + L+ +VG A
Sbjct: 70 PQQYHELGAKIPKGAILSGPPGTGKTLLAKAVAG--EAGVPFLSISGSEFLEMFVGVGPA 127
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHD---TVVNQLLSK 352
+R LFA A + C II DEIDA+ +ARG GG G HD +NQLL +
Sbjct: 128 RVRDLFAQARKNAP-C-------IIFIDEIDAVGRARGR-GGQFGGHDERENTLNQLLVE 178
Query: 353 IDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREY 412
+DG N++V+ TNR D++D ALLRPGR + Q+ + PD KGR I +H K ++
Sbjct: 179 MDGFSSSTNVVVLSGTNRPDVLDPALLRPGRFDRQIHLPAPDIKGRCSIFKVHLKPIK-- 236
Query: 413 KKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRL 451
K + E+ + ++A LT F+GA++ + A A L
Sbjct: 237 KNVDEEKLARKMAALTPGFTGADIANVCNEAALIAARYL 275
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
+L GPP +GKT LA +A + PF+ + E
Sbjct: 85 ILSGPPGTGKTLLAKAVAGEAGVPFLSISGSE 116
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 136 bits (328), Expect = 1e-31
Identities = 95/277 (34%), Positives = 147/277 (53%), Gaps = 23/277 (8%)
Query: 209 DFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQI 268
D +GGLD+ I + PE+ G + G+LLYGPPGTGKTLMA+ +
Sbjct: 808 DISWKDVGGLDSVKEEILD-TIQLPLLHPELFAA-GLRR-SGVLLYGPPGTGKTLMAKAV 864
Query: 269 GKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAI 328
+ V GP++++ YVG+SE N+R +F+ A+ C +I FDE+D++
Sbjct: 865 ATECSLNFLS-VKGPELINMYVGQSEQNVREVFSRAQAASP-C-------VIFFDELDSL 915
Query: 329 CKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQM 388
RG G + GV D VV QLL+++DG+ ++ VIG TNR D++D ALLRPGR + +
Sbjct: 916 APNRGRSGDSGGVMDRVVAQLLAELDGLHSTCDVFVIGATNRPDLLDPALLRPGRFDKLL 975
Query: 389 EIGL-PDEKGRVQILNIHTKRMREYKKIAEDVDSMELAT-LTKNFSGAELEGLVRAAQST 446
+G+ D ++ +L T++ + D E A L N +GA+L + A
Sbjct: 976 YLGVSEDHHAQLSVLKALTRKF----TFSADFRLEEFANKLPLNLTGADLYAMASDALLQ 1031
Query: 447 AMNRLIKASSKVEVDPEAMEKLMVE--RTDFLHALEN 481
AM R+I+ + + +A E ++E DF AL+N
Sbjct: 1032 AMRRIIQETGG---NADAAEDAVIEVCLADFCVALQN 1065
Score = 36.7 bits (81), Expect = 0.081
Identities = 84/344 (24%), Positives = 134/344 (38%), Gaps = 38/344 (11%)
Query: 251 ILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFA-------D 303
+LL G PGTGK + + LN +I I D V +E I+ LF +
Sbjct: 546 VLLTGLPGTGKRAICMAVSSQLNLAVQEISCFDLIGDS-VAATETRIKNLFVRVPRVITN 604
Query: 304 AEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNIL 363
+ + K + I++ I AI K + + T+ + D D ++
Sbjct: 605 RDIKLKFLANDCRPCILLLRHIHAIGKDKEGQEDEPRIAATLQDCTEFIKDQSDW--PLV 662
Query: 364 VIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSME 423
VI +++ D I + E+++E P E+ R+ +L + + +A DV+
Sbjct: 663 VIATSSQPDSICSGIYASFLHEIKLES--PSEQERLCML----QGISSVYSLAPDVNFEV 716
Query: 424 LATLTKNFSGAELEGLVRAAQSTAMNRL---IKASSKVEVDPEAMEKLMVERTDFLHALE 480
LA T F A+ L A S A R+ + A + E +L + A
Sbjct: 717 LARRTAGFVLADFAALFTRATSIASARVTQYLTAKLHLNTKTEDPSQLFTIQQCIKSACR 776
Query: 481 NDIKPAFGTSAEALE-----HFLARGI-----VNW------GSPVSSIFEDGQLYIQQAR 524
+ + F EAL+ H A G ++W S I + QL +
Sbjct: 777 SGVSINFKDFQEALDALQASHADAIGAPKIPDISWKDVGGLDSVKEEILDTIQLPLLHPE 836
Query: 525 ATEASGL--VSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
A+GL VLL GPP +GKT +A +A F+ V PE
Sbjct: 837 LF-AAGLRRSGVLLYGPPGTGKTLMAKAVATECSLNFLSVKGPE 879
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 135 bits (327), Expect = 1e-31
Identities = 86/254 (33%), Positives = 132/254 (51%), Gaps = 16/254 (6%)
Query: 209 DFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQI 268
D G + + GLD+ + + ++ PE LG KGILL G PG GKTL+ +
Sbjct: 207 DSGNIILSGLDDSIKML-KELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLLVHKA 265
Query: 269 GKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAI 328
+ NG + + GESE N+RR+F A R + G ++ DE+DA+
Sbjct: 266 TVDCGIKLVS-TNGTDVFGPHAGESEENLRRVFNKA-----RYASRFGPCVLFIDELDAL 319
Query: 329 CKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQM 388
C RGS G + +V QLL+ +DG++ ++VIG TNR + +D AL RPGR + ++
Sbjct: 320 CPKRGSSGNEE--ENRIVAQLLTLMDGLESRGRVIVIGATNRPNALDPALRRPGRFDREV 377
Query: 389 EIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAM 448
IG+P R+ IL H K + ++ DVD LA +T + GA+L L + A A+
Sbjct: 378 VIGVPSAGQRLDILRAHCKPI----NLSVDVDLTHLAEITVGYVGADLASLCQQAAFAAL 433
Query: 449 NRLI---KASSKVE 459
R + K+ +KV+
Sbjct: 434 KRSLAKNKSGNKVK 447
Score = 71.3 bits (167), Expect = 3e-12
Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Query: 341 VHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQ 400
+ +T N L S++ D + +++++ TNR + ID ALLRPGR++ + + PD K R++
Sbjct: 680 IRETRTNDL-SRLFSQD-VKDLILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLE 737
Query: 401 ILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEV 460
IL +HT+ + +A DVD +A T+ +SGA+LE L R + R+I +
Sbjct: 738 ILRVHTR----FSPLAPDVDLSVIAEGTELYSGADLENLCREVYTDLDGRVIGLVRSATI 793
Query: 461 DPEAMEK 467
A+ K
Sbjct: 794 RQPALGK 800
Score = 59.7 bits (138), Expect = 1e-08
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGL+ A+ R+A + PE ++G + +G+LLYGPPG KT + R +
Sbjct: 486 VGGLEGVKQAL-RQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRAAASSTHC 544
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIF-DEIDAICKARG 333
+ + Q+ YVG++E +R L L +++F DE+D++ G
Sbjct: 545 TFMSL-SCAQLFSSYVGDAERTLRELVLQ-------------LPLLLFLDELDSLA---G 587
Query: 334 SVGGNTGVHDTVVNQLLSKIDGVDQLNNI 362
G N G+ ++ LL+++DGV NI
Sbjct: 588 KRGNNLGMETRLLATLLNEMDGVGVSANI 616
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 135 bits (326), Expect = 2e-31
Identities = 97/296 (32%), Positives = 148/296 (50%), Gaps = 26/296 (8%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGL+ + A+ V+P EV ++ +G+L +GPPGTGKTL+AR + +
Sbjct: 886 VGGLNKQIQALKEMILFPLVYP-EVFDKFKITPPRGVLFFGPPGTGKTLVARALANECSQ 944
Query: 275 REPKIV----NGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICK 330
+ K+ G L K+VGESE +R LF A II FDEID +
Sbjct: 945 GDKKVSFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPS--------IIFFDEIDGLAP 996
Query: 331 ARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
R S +H ++V+ LL+ +DG+D +++IG TNR D ID AL RPGR + + +
Sbjct: 997 VRSS--RQDQIHSSIVSTLLALMDGLDSRGEVVIIGATNRIDAIDPALRRPGRFDREFQF 1054
Query: 391 GLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNR 450
LPD R IL+IHT RE++ ELA + GA+++ L A A+ R
Sbjct: 1055 ALPDRDARRSILSIHT---REWEPRLSQRFISELADYCVGYCGADIKALCTEAALCALRR 1111
Query: 451 ----LIKASSKVEVDPEAMEKLMVERTDFLHALENDIKPAFGTSAEALEHFLARGI 502
+ +S K+ +D +E + DF++A ++ I PA S + L+ I
Sbjct: 1112 RYPQVYTSSRKLLLDINDIE---ITFKDFINATKS-IVPAHQRSVASPARVLSTTI 1163
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 134 bits (323), Expect = 4e-31
Identities = 76/201 (37%), Positives = 120/201 (59%), Gaps = 15/201 (7%)
Query: 250 GILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEK 309
G+LLYGPPGTGKTL+A + K I GP++L KY+G SE +R +F A+ K
Sbjct: 703 GLLLYGPPGTGKTLLAGVVAKECGLNFISI-KGPELLSKYIGASEQAVRDMFTRAQSA-K 760
Query: 310 RCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTN 369
C I+ FDE D++ RG +TGV D VVNQLL+++DGV+ L + ++ T+
Sbjct: 761 PC-------ILFFDEFDSLAPRRGH--DSTGVTDRVVNQLLTQLDGVEGLKGVYILAATS 811
Query: 370 RRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTK 429
R D+ID ALLRPGRL+ + +PD+ R ++ + + +A+D+D ++
Sbjct: 812 RPDLIDPALLRPGRLDKCVYCPIPDQGDRREVF----RALSHDLPLADDIDLDSISDSCH 867
Query: 430 NFSGAELEGLVRAAQSTAMNR 450
+F+GA+++ L+ +Q A++R
Sbjct: 868 HFTGADIKALLYNSQLEAIHR 888
Score = 54.0 bits (124), Expect = 5e-07
Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 25/260 (9%)
Query: 319 IIIFDEIDAICKARGSV--GGNTGVHDTVVNQLLSKIDGVDQLNN--ILVIGMTNRRDMI 374
+++ D++D + + G + G G++ + Q+ + + +N + VI + RD +
Sbjct: 490 VLLLDDLDHVVSSPGPMQEAGGEGLYRLRLAQVFKDMVANEIASNGKVAVIATSESRDSL 549
Query: 375 DEALLRPGRLEVQ---MEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNF 431
ALL V +E+ LPDE+ R+ +L+ KR A+++D +A F
Sbjct: 550 HGALLSSRGCHVFENIVELSLPDERQRLDMLSALAKRKLR-GACADNLDMSLVAKKADGF 608
Query: 432 SGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVERTDFLHALENDIKPAF-GTS 490
S +L LV A A R +++ DP + V +D A+ + A G
Sbjct: 609 SPKDLNSLVDRALHFASVR------QLDKDP-----VTVSNSDIEQAITGFVPAALRGVP 657
Query: 491 AEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLV----SVLLEGPPNSGKTA 546
H + G PV + ++ L+ + A + +LL GPP +GKT
Sbjct: 658 LHQAGHLGWENVGGLG-PVKGVLQETLLWPSKFAGLFAKCPLRLRGGLLLYGPPGTGKTL 716
Query: 547 LAAQLAKLSDFPFVKVCSPE 566
LA +AK F+ + PE
Sbjct: 717 LAGVVAKECGLNFISIKGPE 736
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 130 bits (314), Expect = 5e-30
Identities = 77/192 (40%), Positives = 110/192 (57%), Gaps = 15/192 (7%)
Query: 205 NPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLM 264
N WD IGGL+ + + V P+ + G KG+L YGPPG GKTL+
Sbjct: 306 NVSWD----DIGGLEGVKREL-QELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 360
Query: 265 ARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDE 324
A+ I A I GP++L + GESEAN+R +F D C ++ FDE
Sbjct: 361 AKAIANECQANFISI-KGPELLTMWFGESEANVRDVF-DKARSAAPC-------VLFFDE 411
Query: 325 IDAICKARG-SVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGR 383
+D+I K+RG +VG G D V+NQ+L+++DG++ N+ +IG TNR D+ID A+LRPGR
Sbjct: 412 LDSIAKSRGGNVGDGGGAADRVINQVLTEMDGMNVKKNVFIIGATNRPDIIDPAILRPGR 471
Query: 384 LEVQMEIGLPDE 395
L+ + I LPD+
Sbjct: 472 LDQLIYIPLPDD 483
Score = 79.8 bits (188), Expect = 9e-15
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 30/265 (11%)
Query: 306 EEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTG-VHDTVVNQLLSKIDGVDQLNNILV 364
E KR L+ + +D+I K + G V +V+QLL+ +DG+ Q ++++V
Sbjct: 141 EPVKREEEEESLNEVGYDDIGGCRKQLAQIKETHGEVERRIVSQLLTLMDGLKQRSHVIV 200
Query: 365 IGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMEL 424
+ TNR + +D AL R GR + +++IG+PD GR++IL IHTK M K+ +DVD ++
Sbjct: 201 MAATNRPNSVDVALRRFGRFDREVDIGIPDATGRLEILRIHTKNM----KLGDDVDLEQI 256
Query: 425 ATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVERTDFLHALENDIK 484
E L+ T +D E ++ L V DF +A+
Sbjct: 257 ---------REKMDLIDLEDET-------------IDAEVLDSLAVSMDDFRYAMGVSNP 294
Query: 485 PAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLV---SVLLEGPPN 541
A + + + I + E Q ++ G+ VL GPP
Sbjct: 295 SALRETVVEVPNVSWDDIGGLEGVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPG 354
Query: 542 SGKTALAAQLAKLSDFPFVKVCSPE 566
GKT LA +A F+ + PE
Sbjct: 355 CGKTLLAKAIANECQANFISIKGPE 379
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 126 bits (305), Expect = 6e-29
Identities = 80/214 (37%), Positives = 118/214 (55%), Gaps = 11/214 (5%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGLD + I + V PE+ E LG KG+LLYGPPGTGKTL+AR +
Sbjct: 179 VGGLDKQIKEI-KEVIELPVKHPELFEALGIDQPKGVLLYGPPGTGKTLLARAVAHHTEC 237
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCG---ANSGLH---IIIFDEIDAI 328
+ V+G +++ K++GE +R LF A E +S H II DEID+I
Sbjct: 238 TFIR-VSGSELVQKFIGEGARMVRELFVMARHGENLQAMYFVDSREHAPSIIFMDEIDSI 296
Query: 329 CKAR--GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEV 386
+R G GG++ V T++ +LL+++DG + NI VI TNR D++D ALLRPGR++
Sbjct: 297 GSSRLEGGSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDR 355
Query: 387 QMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVD 420
++E P+E+G ++ R R ED +
Sbjct: 356 KIEFPPPNEEGVCTEAGMYALRERRVHVTQEDFE 389
Score = 33.9 bits (74), Expect = 0.57
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 509 VSSIFEDGQLYIQQARATEASGL---VSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSP 565
+ I E +L ++ EA G+ VLL GPP +GKT LA +A ++ F++V
Sbjct: 186 IKEIKEVIELPVKHPELFEALGIDQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGS 245
Query: 566 E 566
E
Sbjct: 246 E 246
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 123 bits (296), Expect = 7e-28
Identities = 74/182 (40%), Positives = 107/182 (58%), Gaps = 13/182 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGG + + + R + + PE LG + KG+LL+GPPGTGKTL AR + +A
Sbjct: 86 IGGCKEQIDKL-REVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDA 144
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
+++ G +++ KYVGE +R LF A + K C I+ FDEIDAI AR
Sbjct: 145 CFIRVI-GSELVQKYVGEGARMVRELFEMARTK-KAC-------IVFFDEIDAIGGARFD 195
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
GG+ V T++ +L++++DG D NI V+ TNR D +D AL+RPGRL+ ++E GL
Sbjct: 196 DGAGGDNEVQRTML-ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 254
Query: 393 PD 394
PD
Sbjct: 255 PD 256
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VLL GPP +GKT A +A +D F++V E
Sbjct: 121 VLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 153
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 120 bits (289), Expect = 5e-27
Identities = 93/282 (32%), Positives = 142/282 (50%), Gaps = 24/282 (8%)
Query: 148 LEAVD----VVALAAGANAVPR---RVRMGRLLPDASVQFDKAENSSLNLIGKAKGKQPR 200
LEAVD +VA G+N R + L P ASV K N+ ++++
Sbjct: 92 LEAVDQNTGIVASTTGSNYYVRILSTIDKELLKPSASVALHKHSNALVDILPPEADSSIA 151
Query: 201 QSIINPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTG 260
+ IGG+D + I R A + E+ +Q+G +G+LLYGPPG G
Sbjct: 152 MLTNEEKPNVSYAEIGGMDIQKQEI-REAVELPLTHFELYKQIGIDPPRGVLLYGPPGCG 210
Query: 261 KTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHII 320
KT++A+ + A ++V G + + KY+GE +R +F A+E II
Sbjct: 211 KTMLAKAVAHHTTAAFIRVV-GSEFVQKYLGEGPRMVRDVFRLAKENAPA--------II 261
Query: 321 IFDEIDAICKAR--GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEAL 378
DEIDAI R G + V ++ +LL+++DG DQ N+ VI TNR+D +D AL
Sbjct: 262 FIDEIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQNVNVKVIMATNRQDTLDPAL 320
Query: 379 LRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVD 420
LRPGRL+ ++E LPD + + I + T +M ++E+VD
Sbjct: 321 LRPGRLDRKIEFPLPDRRQKRLIFSTITNKM----NLSEEVD 358
Score = 30.7 bits (66), Expect = 5.3
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VLL GPP GKT LA +A + F++V E
Sbjct: 201 VLLYGPPGCGKTMLAKAVAHHTTAAFIRVVGSE 233
Score = 29.9 bits (64), Expect = 9.3
Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 284 QILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHD 343
++ ++Y+ + + N+++ A+EE KR + ++I ++A+ + G V TG +
Sbjct: 54 EVQEEYIKDEQKNLKKELLHAQEEVKRI---QSVPLVIGQFLEAVDQNTGIVASTTGSNY 110
Query: 344 TVVNQLLSKID 354
V ++LS ID
Sbjct: 111 YV--RILSTID 119
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 119 bits (287), Expect = 9e-27
Identities = 83/245 (33%), Positives = 131/245 (53%), Gaps = 18/245 (7%)
Query: 242 QLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEANIRRL 300
QLG K KG LL GPPGTGKTL+A+ + A P + + G ++ + G A +R L
Sbjct: 152 QLGAKIPKGALLVGPPGTGKTLLAKAVAT--EADVPFLSMAGSDFVEMFAGVGSARVRDL 209
Query: 301 FADAEEEEKRCGANSGLHIIIFDEIDAICKARGS---VGGNTGVHDTVVNQLLSKIDGVD 357
F A + C I+ DE+DAI ++R S +GG+ +T+ NQLL ++DG++
Sbjct: 210 FTRARKLAP-C-------IVYIDEVDAIGRSRKSSRSMGGHNEQENTL-NQLLVEMDGMN 260
Query: 358 QLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAE 417
L+ ++++ TNR D++D ALLRPGR + + I LP R++I +H K++ + I
Sbjct: 261 TLDGVIMLASTNRADILDNALLRPGRFDRHIAIDLPTLPERMEIFEVHLKKLTLKRSI-- 318
Query: 418 DVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVERTDFLH 477
D + LA LT SGA++ + A A RL K + + A+E+++ H
Sbjct: 319 DQYTKRLAELTPGHSGADIANICNEAALHAA-RLNKKNVDTKNFEYAVERVIAGMEKRTH 377
Query: 478 ALEND 482
+ D
Sbjct: 378 TMSPD 382
Score = 35.5 bits (78), Expect = 0.19
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYKTHGAKL 594
LL GPP +GKT LA +A +D PF+ + + F E + +VR+ + T KL
Sbjct: 162 LLVGPPGTGKTLLAKAVATEADVPFLSMAGSD----FVEMFAGVGSARVRDLF-TRARKL 216
Query: 595 TEC 597
C
Sbjct: 217 APC 219
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 97.5 bits (232), Expect = 4e-20
Identities = 70/208 (33%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 197 KQPRQSIINPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGP 256
++P +S + IGG N + + + PEV LG G LL+GP
Sbjct: 661 EKPLESFASTQSSVKFADIGGCSNTLEQVGK--LLVHMCHPEVFTTLGVTPTTGFLLHGP 718
Query: 257 PGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSG 316
PG GKTL+A I L K+ +I+ GESE +R LF A + C
Sbjct: 719 PGCGKTLLAHAIAGELEMPFLKLA-ATEIVSGVSGESEEKVRELFTSAVAQAP-C----- 771
Query: 317 LHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNN--ILVIGMTNRRDMI 374
I+ DEIDAI R + + + +V+QLLS +D ++ + +LVIG TNR D +
Sbjct: 772 --ILFLDEIDAITPKRENASKD--MERRIVSQLLSCMDDLNNNPDAHVLVIGATNRPDSL 827
Query: 375 DEALLRPGRLEVQMEIGLPDEKGRVQIL 402
D AL R GR + ++ +G+PDE R +I+
Sbjct: 828 DPALRRAGRFDREISMGIPDESARARIV 855
Score = 36.3 bits (80), Expect = 0.11
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYKTHGAKL 594
LL GPP GKT LA +A + PF+K+ + E + G + ++ KVRE + + A+
Sbjct: 714 LLHGPPGCGKTLLAHAIAGELEMPFLKLAATEIVSGVSGESE----EKVRELFTSAVAQ- 768
Query: 595 TECAPC 600
APC
Sbjct: 769 ---APC 771
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 94.3 bits (224), Expect = 4e-19
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 10/139 (7%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
PE LG H GILL GPPG GKTL+A+ I V GP++L+ YVGESE
Sbjct: 6 PEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFIS-VKGPELLNMYVGESERA 64
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV 356
+R++F A NS +I FDE+D++C R S +G VVNQLL+++DG+
Sbjct: 65 VRQVFQRAR--------NSAPCVIFFDELDSLCPRR-SGSSESGSSVRVVNQLLTEMDGL 115
Query: 357 DQLNNILVIGMTNRRDMID 375
++ ++G TN+ + D
Sbjct: 116 QARKHVFIMGATNKPGIRD 134
Score = 35.1 bits (77), Expect = 0.25
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 520 IQQARATEASGLV---SVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
+Q A GL +LL GPP GKT LA +A S F+ V PE
Sbjct: 3 VQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPE 52
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 87.8 bits (208), Expect = 3e-17
Identities = 59/169 (34%), Positives = 96/169 (56%), Gaps = 15/169 (8%)
Query: 284 QILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR--GSVGGNTGV 341
QI + ++G+ +R FA A+E+ II DE+DAI R G+ V
Sbjct: 162 QIQEMFIGDGAKLVRDAFALAKEKAPA--------IIFIDELDAIGTKRFDSEKAGDREV 213
Query: 342 HDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQI 401
T++ +LL+++DG ++I VI TNR D++D ALLR GRL+ ++E PD++ R +I
Sbjct: 214 QRTML-ELLNQLDGFSSHHDIKVIAATNRVDILDPALLRSGRLDRKIEFPNPDQEARARI 272
Query: 402 LNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNR 450
L IH+++M ++ DV+ EL+ T +F+GA L+ + A A+ R
Sbjct: 273 LQIHSRKM----NVSGDVNFDELSRCTDDFNGAMLKAVCVEAGMIALRR 317
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 70.5 bits (165), Expect = 5e-12
Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 7/116 (6%)
Query: 341 VHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQ 400
+ +T N L S++ D + +++++ TNR + ID ALLRPGR++ + + PD K R++
Sbjct: 213 IRETRTNDL-SRLFSQD-VKDLILVAATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLE 270
Query: 401 ILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAM-NRLIKAS 455
IL +HT+ + +A DVD +A T+ +SGA+LE L R +T + + ++AS
Sbjct: 271 ILRVHTR----FSPLAPDVDLSVIAEGTELYSGADLENLCRENLNTKLGSESVRAS 322
Score = 67.7 bits (158), Expect = 4e-11
Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGL+ A+ R+A + PE ++G + +G+LLYGPPG KT + R +
Sbjct: 15 VGGLEGVKQAL-RQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRAAASSTHC 73
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
+ + Q+ YVG++E +R LF A R A + I+ DE+D++ G
Sbjct: 74 TFMSL-SCAQLFSSYVGDAERTLRELFLKA-----RATAPA---ILFLDELDSLA---GK 121
Query: 335 VGGNTGVHDTVVNQLLSKIDGVDQLNNI 362
G N G+ ++ LL+++DGV NI
Sbjct: 122 RGNNLGMETRLLATLLNEMDGVGVSANI 149
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 67.3 bits (157), Expect = 5e-11
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 18/157 (11%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
+G+L+ GPPGTGKT++A+ + V+ + KY GESE +R LF E
Sbjct: 284 RGVLMVGPPGTGKTMLAKAVATECGTTFFN-VSSSTLTSKYRGESEKLVRILF-----EM 337
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV------DQLNNI 362
R A S I DEID+IC RGS + V ++LL ++DGV + +
Sbjct: 338 ARFYAPS---TIFVDEIDSICSRRGSDSEHEASR-RVKSELLVQMDGVGGSSDDGETKQV 393
Query: 363 LVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRV 399
+V+ TN +DEAL R RLE ++ I LP + +V
Sbjct: 394 MVLAATNFPWDLDEALRR--RLEKRIYIPLPTDLPQV 428
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 67.3 bits (157), Expect = 5e-11
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 258 GTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGL 317
GTGK+ +A+ + N V+ ++ K++GESE +++LF A E +
Sbjct: 175 GTGKSYLAKAVATEANNSTFISVSSSDLVSKWLGESERLVKQLFELARENKP-------- 226
Query: 318 HIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNN-ILVIGMTNRRDMIDE 376
II DE+D++C +R + + + L ++ GV N+ +LV+G TN +D
Sbjct: 227 SIIFIDEVDSLCGSRSENESESA--RRIKTEFLVQMQGVGVDNDQVLVLGATNIPWTLDS 284
Query: 377 ALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAEL 436
A+ R R E ++ I LP++ R ++ +H + K + + +L T +SGA++
Sbjct: 285 AIRR--RFEKRIYIPLPEQAARSKMFELH---LGGSKTLLGAQEIKQLGQKTDGYSGADI 339
Query: 437 EGLVRAAQSTAMNRLIKAS 455
+VR A + ++ +A+
Sbjct: 340 SVVVREALMMPVRKVQQAT 358
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 60.5 bits (140), Expect = 6e-09
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGGLD + I + + + PE+ E++G K KG++LYG PGTGKTL+A+ + +A
Sbjct: 382 IGGLDTQIQEI-KESVELPLTHPELYEEMGIKPPKGVILYGQPGTGKTLLAKAVANQTSA 440
Query: 275 REPKIVNGPQILDKYV 290
++V G +++ KY+
Sbjct: 441 TFLRVV-GSELIQKYL 455
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 54.0 bits (124), Expect = 5e-07
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 209 DFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQI 268
D G + + GLD+ + + ++ PE LG KGILL G PG GKTL+ +
Sbjct: 37 DSGNIILSGLDDSIKML-KELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLLVHKA 95
Query: 269 GKMLNAREPKIVNGPQILDKYVGESEANIRRLFADA 304
+ NG + + GESE N+RR+F A
Sbjct: 96 TVDCGIKLVS-TNGTDVFGPHAGESEENLRRVFNKA 130
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 53.2 bits (122), Expect = 9e-07
Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 18/108 (16%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREP-KIVNGPQILDKYVGESEA 295
PE ++LG K G+LL G PGTGKTL+A+ + A P +G + + +VG A
Sbjct: 153 PEKFKRLGGKLPTGVLLIGSPGTGKTLLAKAVAG--EAGVPFFFCSGSEFDEMFVGVGAA 210
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHD 343
+R LFA A +E C I+ DE+DAI GG+ VHD
Sbjct: 211 RVRNLFA-AAKEHAPC-------IVFVDELDAI-------GGSRVVHD 243
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 46.8 bits (106), Expect = 8e-05
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 21/152 (13%)
Query: 244 GCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFAD 303
G + +G LLYGPPG GK+ + + L+ ++N + D+ + + N L +
Sbjct: 218 GIPYRRGYLLYGPPGCGKSSFIQALAGELD-YSICVMN---LSDRSLTDDRLN--HLMSV 271
Query: 304 AEEEEKRCGANSGLHIIIFDEIDAICKAR-----GSVGGNTGVHDTVVNQLLSKIDGVDQ 358
A ++ II+ ++IDA R + GG + + LL+ +DGV
Sbjct: 272 APQQS----------IILLEDIDAAFVKRDETNAANKGGGMYQNRVTFSGLLNTLDGVAS 321
Query: 359 LNNILVIGMTNRRDMIDEALLRPGRLEVQMEI 390
+V TN +D AL+RPGR++ + EI
Sbjct: 322 SEERVVFMTTNHLKRLDPALIRPGRVDFKQEI 353
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 43.2 bits (97), Expect = 0.001
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILD 287
PE LG H GILL GPPG GKTL+A+ I V GP++L+
Sbjct: 6 PEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFIS-VKGPELLN 55
Score = 35.1 bits (77), Expect = 0.25
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 520 IQQARATEASGLV---SVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
+Q A GL +LL GPP GKT LA +A S F+ V PE
Sbjct: 3 VQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPE 52
>SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 41.1 bits (92), Expect = 0.004
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 383 RLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELE 437
R++ ++E +PDEK + +I NIHT+RM +AEDV+ E + SGA+++
Sbjct: 2 RIDRKIEFPMPDEKTKRRIFNIHTQRM----TLAEDVNLEEFIMAKDDLSGADIK 52
>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
Length = 568
Score = 40.3 bits (90), Expect = 0.007
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 248 VKGILLYGPPGTGK----TLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN-IRRLFA 302
+K LL GPPG GK TL+ +++G + L++ V ES +N F
Sbjct: 271 LKAALLSGPPGVGKTTTATLVCQELGYSYVEMNASDARSKKTLEQVVSESLSNKSMDAFV 330
Query: 303 DAEEEEKRCGANSGL-HIIIFDEIDAI 328
+ K A SGL H+++ DE+D +
Sbjct: 331 GSNCASKGVAAKSGLKHVLLMDEVDGM 357
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 37.9 bits (84), Expect = 0.035
Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 15/126 (11%)
Query: 251 ILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDK--YVGES-EANIRRLFADAEEE 307
ILL GP G+GKTL+A+ I + L+ P + L + YVGE E+ I +L +A
Sbjct: 273 ILLLGPTGSGKTLLAQTIARCLDV--PFAICDCTALTQAGYVGEDIESVIAKLLQEAGGN 330
Query: 308 EKRCGANSGLHIIIFDEIDAICKARG-----SVGGNTGVHDTVVNQLLSKIDGVDQLNNI 362
++ A G I+ DE+D I G VGG GV ++ L + V + N+
Sbjct: 331 VEK--AQQG--IVFLDEVDKIGAVPGVHNLRDVGGE-GVQQGLLKILEGTVVNVPERNSR 385
Query: 363 LVIGMT 368
+ G T
Sbjct: 386 KMRGDT 391
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 533 SVLLEGPPNSGKTALAAQLAKLSDFPFVKVC 563
++LL GP SGKT LA +A+ D PF +C
Sbjct: 272 NILLLGPTGSGKTLLAQTIARCLDVPFA-IC 301
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 33.9 bits (74), Expect = 0.57
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 249 KGILLYGPPGTGKTLMARQIGK 270
+ +L YGPPGTGKT+ A+ + +
Sbjct: 330 RNLLFYGPPGTGKTMFAKSLAR 351
>SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 802
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 810 DSDSSLKPETPRLLEYIDSNSDSSDTETCDLDSRTHPLTPLNFILSDDDHTVCDSSDLQY 869
DS+ S+ + + D+ SDS+DT CD + ++ N ++D + TVCDS+D +
Sbjct: 487 DSNDSVSDSNDTVSDRNDTVSDSNDT-VCDSNDT---VSDDNDTVNDSNDTVCDSNDTES 542
Query: 870 D 870
D
Sbjct: 543 D 543
>SB_46289| Best HMM Match : DUF1690 (HMM E-Value=0.32)
Length = 947
Score = 33.5 bits (73), Expect = 0.76
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 450 RLIKASSKVEVDPEAMEKLMVERTDFLHALENDIKPAFGTSAEALEHFLARGIVN 504
R+I A SKV + AME+ M E+ D LH N K G+ A+ G++N
Sbjct: 756 RVIDAQSKVSSELSAMEQEMAEKLDALHVDINTAKTLAGSMGHAITD-RVNGVLN 809
>SB_5453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2578
Score = 33.1 bits (72), Expect = 1.00
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 252 LLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGES-EANIRRLFADAEEEE-K 309
++ GPPG GKT + +I ++L + +P++ GP +L Y + + ++ +F E+E
Sbjct: 535 IVQGPPGCGKTFLGVKIVQLLLSLQPQL-TGPVLLLTYKNHALDEFLKAMFQFCEKENIV 593
Query: 310 RCGANS 315
R G S
Sbjct: 594 RIGGRS 599
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPG 258
+GGL + + R + PE+ +++G KG LL+GPPG
Sbjct: 137 VGGLSEQIREL-REVIELPLTNPELFQRVGIAPPKGCLLFGPPG 179
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 32.7 bits (71), Expect = 1.3
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 251 ILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFAD-AEEEEK 309
+L YGPPGTGKT + K L P G +L+ + + I + D
Sbjct: 13 LLFYGPPGTGKTSTILAVAKQL---YPDKQFGSMVLELNASD-DRGIGIVRGDILSFAST 68
Query: 310 RCGANSGLHIIIFDEIDAI 328
R SG ++I DE DA+
Sbjct: 69 RTIFKSGFKLVILDEADAM 87
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 250 GILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGES 293
G+LL GP G+GKT + + M P + Q+ D+ G+S
Sbjct: 120 GVLLEGPVGSGKTCLVEHVASMCGRSTPPEIMKVQLGDQTDGKS 163
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKV 562
+LLEG P GKT+L + +AK S V++
Sbjct: 1620 ILLEGSPGVGKTSLVSAIAKASGHELVRI 1648
>SB_57545| Best HMM Match : zf-C3HC4 (HMM E-Value=0.023)
Length = 601
Score = 31.9 bits (69), Expect = 2.3
Identities = 40/139 (28%), Positives = 54/139 (38%), Gaps = 4/139 (2%)
Query: 494 LEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLVSVLLEGPPNSGKTALAAQLAK 553
LEH+L + +V + F +L Q+ A +AS L SV+ E P L +
Sbjct: 47 LEHYLKKFVVPAPGDWPTWFYQKKLIAQEVNA-DASFL-SVIPEQGPFHVFLNLQEDVVT 104
Query: 554 LSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYKTHGAKLTE--CAPCTSDLRSYEIDY 611
+ DF F KV K +I E K A +TE S LRS+ Y
Sbjct: 105 IYDFLFKKVYKETFGSDLPNKPKPFRISLYHELKKKWMALITEKKVEIWHSVLRSFISSY 164
Query: 612 DDVSECTDSPLDIGYHKKE 630
D S+ D L K E
Sbjct: 165 DSASQIRDKALSFAASKTE 183
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 31.9 bits (69), Expect = 2.3
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 73 TIDVKPFKPSSAECLCSVTLEADFMMKKTTSTDPYDSEQMARDFLIQFANQVFTVGQQ 130
T D + +P SA S TL D ++ + DP + +AR+F I N++FT G+Q
Sbjct: 392 TFDAEDNRPGSALSRSS-TLRTDQLVSRRPREDPQMVKILAREFKIHM-NRLFTSGEQ 447
Score = 31.9 bits (69), Expect = 2.3
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 73 TIDVKPFKPSSAECLCSVTLEADFMMKKTTSTDPYDSEQMARDFLIQFANQVFTVGQQ 130
T D + +P SA S TL D ++ + DP + +AR+F I N++FT G+Q
Sbjct: 560 TFDAEDNRPGSALSRSS-TLRTDQLVSRRPREDPQMVKILAREFKIHM-NRLFTSGEQ 615
>SB_2807| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 244 GCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI 279
G KH I GPPG GK+ GKML ++ K+
Sbjct: 117 GRKHSYRIGFSGPPGAGKSTFIEFFGKMLTSKGQKV 152
>SB_47595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 31.5 bits (68), Expect = 3.1
Identities = 39/139 (28%), Positives = 54/139 (38%), Gaps = 4/139 (2%)
Query: 494 LEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLVSVLLEGPPNSGKTALAAQLAK 553
LEH+L + +V + F +L Q+ A +AS L SV+ E P L +
Sbjct: 210 LEHYLKKFVVPAPGDWPTWFYQKKLIAQEVNA-DASFL-SVIPEQGPFHVFLNLQEDVVT 267
Query: 554 LSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYKTHGAKLTE--CAPCTSDLRSYEIDY 611
+ DF F KV K ++ E K A +TE S LRS+ Y
Sbjct: 268 IYDFLFKKVYKETFGSDLPNKPKPFRVSLYHELKKKWMALITEKKVEIWHSVLRSFISSY 327
Query: 612 DDVSECTDSPLDIGYHKKE 630
D S+ D L K E
Sbjct: 328 DSASQIRDKALSFAASKTE 346
>SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31)
Length = 974
Score = 31.5 bits (68), Expect = 3.1
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Query: 545 TALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYKTHGAKLTECAPCTSDL 604
T L AQL +++ V P + + A+ L K+R K+K+H + + C P +
Sbjct: 711 TGLFAQLVRVTLIIAVLFTYPLQLFPVIQIAESLVFEKIRRKHKSHLSDIVSC-PADAIG 769
Query: 605 RSYEIDYDDVSECTD-SPLDIGYHKKEMAAKRTEI 638
R +Y + T + H + A E+
Sbjct: 770 RQEVTNYQTIDSTTSHGESGVSVHARSKEANEHEL 804
>SB_7302| Best HMM Match : DUF910 (HMM E-Value=2.2)
Length = 288
Score = 31.5 bits (68), Expect = 3.1
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 735 PAHATLLVRTENVTSRTDNLAMSPSFSEMADSGR--YTEEASSSHIDIVAMSYEDALLSN 792
P T+++ ++ + +R NL S S+ + +TE SS H + D+ ++
Sbjct: 23 PIDETIILLSKEIENRK-NLERKSSHSDKSIQNLVIHTENTSSDHHRNTPIILADSDCTD 81
Query: 793 SFDVINLEELPAATRSYDSDSSLKPETPRLLEYIDSNSDSSDTETCDLDS-RTHPLTPLN 851
S D ++ PA+ + S K R+L+ + + D+++ DL+S T TP+
Sbjct: 82 SSDAVSR---PASAEPFASPPQPKSLRQRMLQKYNPENSVDDSDSDDLESFFTKHRTPIP 138
Query: 852 FILS 855
LS
Sbjct: 139 LRLS 142
>SB_41548| Best HMM Match : ResIII (HMM E-Value=0.27)
Length = 514
Score = 31.1 bits (67), Expect = 4.0
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 252 LLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKY 289
++ GPPG GKT + +I ++L + +P++ GP +L Y
Sbjct: 394 IVQGPPGCGKTFLGVKIVQLLLSLQPQL-TGPVLLLTY 430
>SB_44585| Best HMM Match : DeoC (HMM E-Value=3.7e-13)
Length = 473
Score = 31.1 bits (67), Expect = 4.0
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 482 DIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLVSVLLEGPPN 541
+IK A A+ ++ + RG V G+ +++E+ +A + L ++L G
Sbjct: 45 EIKMAVSAGAQEIDIVITRGHVLSGN-YQALYEE---IAAMRKACGDAHLKTILATGELG 100
Query: 542 SGKTALAAQL-AKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYKTHGAKL 594
S A L A ++ F+K + ++ V T + +R VR+ Y+ G K+
Sbjct: 101 SLTNVYKASLVAMMAGSDFIKTSTGKEAVNATFPVALVMVRAVRDYYERTGHKV 154
>SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 31.1 bits (67), Expect = 4.0
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 9/135 (6%)
Query: 727 IVIPQPTAPAHATLLVRTENVTSRTDNLAMSPSFSEMADSGRYTEEASSSHIDIVAMSYE 786
++ P+ TL+ T ++T++T +A +PS + T EAS + +A +
Sbjct: 724 LIATTPSLTTQTTLIATTPSLTTQTTLIATTPSLTTQTTLIATTPEASITQTTTIATTPS 783
Query: 787 DALLSNSFDVINLEELP----AATRSYDSDSSLKPETPRLLEYIDSNSDSSDTETCDLDS 842
S SF +L ++P SY S L P P + S+ S ++ C S
Sbjct: 784 AVTPSTSF-TDSLPDIPFPFFPVLPSY-SSLMLDPSPPDHQD--SSHFPSFNSSNCSPPS 839
Query: 843 RT-HPLTPLNFILSD 856
T P +P N + D
Sbjct: 840 LTLTPHSPQNTLPDD 854
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 31.1 bits (67), Expect = 4.0
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 749 SRTDNLAMSPSFSEMADSGRYTEEASSSHIDIVAMSYEDALLSNSFDVINLEELPAATRS 808
S +DN S ++ ++S + + SSS S D SN+ + N + + +
Sbjct: 73 SNSDNSNSDNSNTDNSNSDNSSSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNN 132
Query: 809 YDSDSSLKPET-PRLLEYIDSNSDSSDTETCDLDSRTHPLTPLNFILSDDDHTVCDSSD 866
+ D+S ++ P +SNSD+S+T+ + D+ T + + + SD+ +T SD
Sbjct: 133 SNQDNSNSDDSKPDNSNTNNSNSDNSNTDNSNSDNSTSDNSNPDNLTSDNSNTDNSGSD 191
>SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)
Length = 991
Score = 30.7 bits (66), Expect = 5.3
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 251 ILLYGPPGTGKTLMARQIGKMLNAR 275
+ + GPP +GKTL+A+Q+ + NA+
Sbjct: 322 VCVLGPPHSGKTLVAKQLAERYNAK 346
>SB_56566| Best HMM Match : Ank (HMM E-Value=0)
Length = 1225
Score = 30.3 bits (65), Expect = 7.0
Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 11/176 (6%)
Query: 372 DMIDEALLR-PGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKI--AEDVDSMELATLT 428
+++ E LL+ PG L+ + + EKG V +IH + Y + A +++ +
Sbjct: 460 EVVREMLLKVPGTLKSESPSVVDSEKGDV---SIHGNQYYSYTPLHLAAQSGHVDVVRIL 516
Query: 429 KNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVERTDFLHALENDIKPAFG 488
N G ++ A Q + L + + EV + K V+ LH + + A
Sbjct: 517 LNSPGVRVDSAT-AIQGSIPLHLAAENGQSEVVSILLSKSTVQ----LHVKDKVGRSALH 571
Query: 489 TSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLVSVLLEGPPNSGK 544
+A L ++ G+ +++ E+G+ I A A+ +V+ LL+ N+ +
Sbjct: 572 LAASNGHRELVSQLIGQGADINAPDEEGKFPICYAAASGHVSVVNYLLQQEMNTDR 627
>SB_16493| Best HMM Match : NACHT (HMM E-Value=1.1e-08)
Length = 833
Score = 29.9 bits (64), Expect = 9.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 227 RRAFASRVFPPEVVEQLGCK-HVKGILLYGPPGTGKTLMARQI 268
+R +FP + + CK + K +L+ G PG+GKT M +++
Sbjct: 34 KRQGGEEIFPVDEMFTKDCKTYNKRVLVEGGPGSGKTTMCQRL 76
>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
Length = 933
Score = 29.9 bits (64), Expect = 9.3
Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 18/227 (7%)
Query: 370 RRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTK 429
R ALL PGR ++ + GR + + T ++ E + +D++E A +
Sbjct: 189 RSPKASRALLEPGRSSIETRRSVEVLLGRGEAIKNLTHKVSE---LQARIDALENAETKE 245
Query: 430 NFS-GAELEGLVRAAQSTA---MNRLIKASSKVEVDPEAMEKLMVERTDFLHALENDIKP 485
S ++R T M ++I S ++E ++E L E D L A ++K
Sbjct: 246 EVSIIPSAASIIRKESKTPAHDMMQIISVSKRLEETENSIEGL-TELVDVLSAELTEVKE 304
Query: 486 AFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLVSVLLEGPPNSGKT 545
A + E + + + + S ++ + + Q + A++ S LE + K
Sbjct: 305 AMPSKKEIPD--MRNNLKDLKSSINEVKKQTD-DSQNSHASQLSA-----LEKTVDEMKK 356
Query: 546 ALAAQLAKLSDFP--FVKVCSPEDMVGFTETAKCLQIRKVREKYKTH 590
AL QL +S+ P V + E VG + I K + +TH
Sbjct: 357 ALNQQLKDVSNRPAATVDMAEVEKFVGKKIDQEMDHITKSLARQQTH 403
>SB_54124| Best HMM Match : AAA (HMM E-Value=7.8e-08)
Length = 251
Score = 29.9 bits (64), Expect = 9.3
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 246 KHVKGILLYGPPGTGKTLMARQIGKMLN----AREPKI--VNGPQILDKYVGES 293
K ++ G PGTGKT MAR + +L+ + K+ V ++ +Y+GE+
Sbjct: 11 KETYHVMFVGNPGTGKTTMARMMAGILHEAGVIKRNKVIEVQRTALVGRYIGET 64
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 29.9 bits (64), Expect = 9.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 252 LLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESE 294
++ GPPGTGKT + ++ K+L + K +G + D E E
Sbjct: 875 VIQGPPGTGKTYIGLKVAKVLLHNKKKWDSGTEQHDDKGVEGE 917
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.133 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,614,434
Number of Sequences: 59808
Number of extensions: 1139823
Number of successful extensions: 3050
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2895
Number of HSP's gapped (non-prelim): 120
length of query: 878
length of database: 16,821,457
effective HSP length: 88
effective length of query: 790
effective length of database: 11,558,353
effective search space: 9131098870
effective search space used: 9131098870
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)
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