Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000447-TA|BGIBMGA000447-PA|IPR003960|AAA-protein
subdomain, IPR003593|AAA ATPase, IPR009010|Aspartate
decarboxylase-like fold, IPR003338|AAA ATPase VAT, N-terminal,
IPR004201|Cell division protein 48, CDC48, domain 2, IPR003959|AAA
ATPase, central region
(878 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 750 0.0
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 750 0.0
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 750 0.0
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 164 3e-40
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 162 8e-40
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 162 8e-40
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 148 2e-35
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 146 4e-35
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 146 4e-35
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 146 6e-35
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 144 2e-34
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 144 2e-34
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 142 7e-34
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 142 1e-33
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 142 1e-33
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 142 1e-33
Z70205-4|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 138 2e-32
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 138 2e-32
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 138 2e-32
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 128 1e-29
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 128 1e-29
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 127 4e-29
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 126 5e-29
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 123 6e-28
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 122 1e-27
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 122 1e-27
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 122 1e-27
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 118 2e-26
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 116 1e-25
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 109 6e-24
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 109 6e-24
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 88 2e-17
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 85 2e-16
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 85 2e-16
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Hypothetical ... 85 2e-16
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 81 3e-15
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 81 3e-15
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 81 4e-15
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 76 1e-13
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 66 1e-10
AC132211-4|AAN01432.2| 238|Caenorhabditis elegans Hypothetical ... 63 7e-10
AC024789-1|AAK85500.1| 238|Caenorhabditis elegans Hypothetical ... 63 7e-10
Z48583-3|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 45 3e-04
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 41 0.003
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 41 0.003
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 36 0.094
U80026-1|AAC25844.1| 355|Caenorhabditis elegans Fucosyl transfe... 33 0.88
U42848-7|AAA83612.2| 567|Caenorhabditis elegans Hypothetical pr... 33 0.88
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 32 1.5
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 32 1.5
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 32 1.5
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 32 1.5
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr... 31 2.7
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 31 2.7
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 31 3.5
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 31 3.5
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr... 31 4.7
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 30 6.2
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 30 6.2
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 750 bits (1854), Expect = 0.0
Identities = 365/602 (60%), Positives = 454/602 (75%), Gaps = 15/602 (2%)
Query: 2 KAAKCPSDELAITNCALIHQDDFPS-DIKHIEVSTGPSQHFVFSIRFYNGVDRGTVGFSA 60
+ K PS+E + N A +++ DF IKH+ V+ GP+ H++FSIR + G + F
Sbjct: 69 RVRKAPSEEHTLANYAYVNRSDFDDKQIKHVRVNPGPAHHYIFSIRNDGSIKPGEIAFGV 128
Query: 61 PQRKWATLSIGQTIDVKPFKPSSAECLCSVTLEADFMMKKTTSTDPYDSEQMARDFLIQF 120
P RKWA LS+ Q + V PF +E + S+ L ADF KK +++P +++ MAR+F IQF
Sbjct: 129 PHRKWAALSLDQEVRVTPFTFQQSEYVGSMILTADFNAKKNVTSEPLNADLMAREFSIQF 188
Query: 121 ANQVFTVGQQLAFLFQEKK-----VLSLIVKNLEAVDVVALAAGANAV---------PRR 166
Q F+ G Q+AF F++K+ LSL+VK++E D+ AA A+ P++
Sbjct: 189 GGQAFSKGMQMAFRFEDKEKNKTHTLSLVVKSIEGFDIGKAAAAASGASNTDSSATKPKQ 248
Query: 167 VRMGRLLPDASVQFDKAENSSLNLIGKAKGKQPRQSIINPDWDFGKMGIGGLDNEFNAIF 226
+ G LLP++ + FDK E S LNLIGK+KGK +SIINPDWDF +MGIGGLD EF+ IF
Sbjct: 249 IEAGELLPNSVIVFDKEEGSMLNLIGKSKGKSAYRSIINPDWDFQQMGIGGLDTEFSHIF 308
Query: 227 RRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQIL 286
RRAFASRVFPPE +EQLG KHV+GILL+GPPGTGKTLMARQIGKMLNAREPKIVNGPQIL
Sbjct: 309 RRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQIL 368
Query: 287 DKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVV 346
DKYVGESE+N+R+LFADAEEE +RCGANSGLHIIIFDEIDAICK RGS+ G++ VHDTVV
Sbjct: 369 DKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTVV 428
Query: 347 NQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHT 406
NQLLSK+DGV+QLNNILVIGMTNRRDMIDEALLRPGRLEVQME+ LPDE GR+QIL IHT
Sbjct: 429 NQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHT 488
Query: 407 KRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAME 466
RMREY K+ +VD +++ TKNFSGAELEGLVRAAQS+AMNRL+KA K + DP+A+E
Sbjct: 489 ARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNRLVKAGGKAQADPDAIE 548
Query: 467 KLMVERTDFLHALENDIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARAT 526
KL + DF +ALENDIKPAFG S E+L FL+RG++ WG V+ I ++G L +
Sbjct: 549 KLAINSGDFDYALENDIKPAFGRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNP 608
Query: 527 EASGLVSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREK 586
E SG +V+L G +GKT+LAAQ+AK SDFPFVKV SPED VGF+E+AKC+ ++K E
Sbjct: 609 ENSGFRTVVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGFSESAKCMALKKAFED 668
Query: 587 YK 588
K
Sbjct: 669 AK 670
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 750 bits (1854), Expect = 0.0
Identities = 365/602 (60%), Positives = 454/602 (75%), Gaps = 15/602 (2%)
Query: 2 KAAKCPSDELAITNCALIHQDDFPS-DIKHIEVSTGPSQHFVFSIRFYNGVDRGTVGFSA 60
+ K PS+E + N A +++ DF IKH+ V+ GP+ H++FSIR + G + F
Sbjct: 69 RVRKAPSEEHTLANYAYVNRSDFDDKQIKHVRVNPGPAHHYIFSIRNDGSIKPGEIAFGV 128
Query: 61 PQRKWATLSIGQTIDVKPFKPSSAECLCSVTLEADFMMKKTTSTDPYDSEQMARDFLIQF 120
P RKWA LS+ Q + V PF +E + S+ L ADF KK +++P +++ MAR+F IQF
Sbjct: 129 PHRKWAALSLDQEVRVTPFTFQQSEYVGSMILTADFNAKKNVTSEPLNADLMAREFSIQF 188
Query: 121 ANQVFTVGQQLAFLFQEKK-----VLSLIVKNLEAVDVVALAAGANAV---------PRR 166
Q F+ G Q+AF F++K+ LSL+VK++E D+ AA A+ P++
Sbjct: 189 GGQAFSKGMQMAFRFEDKEKNKTHTLSLVVKSIEGFDIGKAAAAASGASNTDSSATKPKQ 248
Query: 167 VRMGRLLPDASVQFDKAENSSLNLIGKAKGKQPRQSIINPDWDFGKMGIGGLDNEFNAIF 226
+ G LLP++ + FDK E S LNLIGK+KGK +SIINPDWDF +MGIGGLD EF+ IF
Sbjct: 249 IEAGELLPNSVIVFDKEEGSMLNLIGKSKGKSAYRSIINPDWDFQQMGIGGLDTEFSHIF 308
Query: 227 RRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQIL 286
RRAFASRVFPPE +EQLG KHV+GILL+GPPGTGKTLMARQIGKMLNAREPKIVNGPQIL
Sbjct: 309 RRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQIL 368
Query: 287 DKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVV 346
DKYVGESE+N+R+LFADAEEE +RCGANSGLHIIIFDEIDAICK RGS+ G++ VHDTVV
Sbjct: 369 DKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTVV 428
Query: 347 NQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHT 406
NQLLSK+DGV+QLNNILVIGMTNRRDMIDEALLRPGRLEVQME+ LPDE GR+QIL IHT
Sbjct: 429 NQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHT 488
Query: 407 KRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAME 466
RMREY K+ +VD +++ TKNFSGAELEGLVRAAQS+AMNRL+KA K + DP+A+E
Sbjct: 489 ARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNRLVKAGGKAQADPDAIE 548
Query: 467 KLMVERTDFLHALENDIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARAT 526
KL + DF +ALENDIKPAFG S E+L FL+RG++ WG V+ I ++G L +
Sbjct: 549 KLAINSGDFDYALENDIKPAFGRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNP 608
Query: 527 EASGLVSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREK 586
E SG +V+L G +GKT+LAAQ+AK SDFPFVKV SPED VGF+E+AKC+ ++K E
Sbjct: 609 ENSGFRTVVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGFSESAKCMALKKAFED 668
Query: 587 YK 588
K
Sbjct: 669 AK 670
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 750 bits (1854), Expect = 0.0
Identities = 365/602 (60%), Positives = 454/602 (75%), Gaps = 15/602 (2%)
Query: 2 KAAKCPSDELAITNCALIHQDDFPS-DIKHIEVSTGPSQHFVFSIRFYNGVDRGTVGFSA 60
+ K PS+E + N A +++ DF IKH+ V+ GP+ H++FSIR + G + F
Sbjct: 3 RVRKAPSEEHTLANYAYVNRSDFDDKQIKHVRVNPGPAHHYIFSIRNDGSIKPGEIAFGV 62
Query: 61 PQRKWATLSIGQTIDVKPFKPSSAECLCSVTLEADFMMKKTTSTDPYDSEQMARDFLIQF 120
P RKWA LS+ Q + V PF +E + S+ L ADF KK +++P +++ MAR+F IQF
Sbjct: 63 PHRKWAALSLDQEVRVTPFTFQQSEYVGSMILTADFNAKKNVTSEPLNADLMAREFSIQF 122
Query: 121 ANQVFTVGQQLAFLFQEKK-----VLSLIVKNLEAVDVVALAAGANAV---------PRR 166
Q F+ G Q+AF F++K+ LSL+VK++E D+ AA A+ P++
Sbjct: 123 GGQAFSKGMQMAFRFEDKEKNKTHTLSLVVKSIEGFDIGKAAAAASGASNTDSSATKPKQ 182
Query: 167 VRMGRLLPDASVQFDKAENSSLNLIGKAKGKQPRQSIINPDWDFGKMGIGGLDNEFNAIF 226
+ G LLP++ + FDK E S LNLIGK+KGK +SIINPDWDF +MGIGGLD EF+ IF
Sbjct: 183 IEAGELLPNSVIVFDKEEGSMLNLIGKSKGKSAYRSIINPDWDFQQMGIGGLDTEFSHIF 242
Query: 227 RRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQIL 286
RRAFASRVFPPE +EQLG KHV+GILL+GPPGTGKTLMARQIGKMLNAREPKIVNGPQIL
Sbjct: 243 RRAFASRVFPPEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQIL 302
Query: 287 DKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVV 346
DKYVGESE+N+R+LFADAEEE +RCGANSGLHIIIFDEIDAICK RGS+ G++ VHDTVV
Sbjct: 303 DKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTVV 362
Query: 347 NQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHT 406
NQLLSK+DGV+QLNNILVIGMTNRRDMIDEALLRPGRLEVQME+ LPDE GR+QIL IHT
Sbjct: 363 NQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHT 422
Query: 407 KRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAME 466
RMREY K+ +VD +++ TKNFSGAELEGLVRAAQS+AMNRL+KA K + DP+A+E
Sbjct: 423 ARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNRLVKAGGKAQADPDAIE 482
Query: 467 KLMVERTDFLHALENDIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARAT 526
KL + DF +ALENDIKPAFG S E+L FL+RG++ WG V+ I ++G L +
Sbjct: 483 KLAINSGDFDYALENDIKPAFGRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNP 542
Query: 527 EASGLVSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREK 586
E SG +V+L G +GKT+LAAQ+AK SDFPFVKV SPED VGF+E+AKC+ ++K E
Sbjct: 543 ENSGFRTVVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGFSESAKCMALKKAFED 602
Query: 587 YK 588
K
Sbjct: 603 AK 604
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 164 bits (398), Expect = 3e-40
Identities = 118/364 (32%), Positives = 178/364 (48%), Gaps = 23/364 (6%)
Query: 209 DFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQI 268
D G +GG+ + I + + P++ + +G K +GILL+GPPGTGKTL+AR +
Sbjct: 206 DIGYDDLGGVRKQLAQI-KEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAV 264
Query: 269 GKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAI 328
+ ++NGP+++ K GESE+N+R+ F + E+ + I+ DEIDAI
Sbjct: 265 ANETGSFF-FLINGPEVMSKMSGESESNLRKAFEECEKNQPA--------ILFIDEIDAI 315
Query: 329 CKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQM 388
R G V +V+QLL+ +DGV +N++VI TNR + ID AL R GR + ++
Sbjct: 316 APKREKTNGE--VERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREI 373
Query: 389 EIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAA---QS 445
+IG+PD GR++IL IHTK M K+A+DVD ++A F GA+L L A Q
Sbjct: 374 DIGIPDAVGRLEILRIHTKNM----KLADDVDLEQIANECHGFVGADLASLCSEAALQQI 429
Query: 446 TAMNRLIKASSKVEVDPEAMEKLMVERTDFLHALENDIKPAFGTSAEALEHFLARGIVNW 505
LI ++D E + L V +F A A + + I
Sbjct: 430 REKMELIDLEDD-QIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGL 488
Query: 506 GSPVSSIFEDGQLYIQQARATEASGLV---SVLLEGPPNSGKTALAAQLAKLSDFPFVKV 562
+ + E Q ++ G+ VL GPP GKT LA +A F+ +
Sbjct: 489 QNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISI 548
Query: 563 CSPE 566
PE
Sbjct: 549 KGPE 552
Score = 153 bits (370), Expect = 7e-37
Identities = 99/273 (36%), Positives = 149/273 (54%), Gaps = 23/273 (8%)
Query: 192 GKAKGKQPRQSII---NPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHV 248
GK+ R++++ N W IGGL N + + V PE + G +
Sbjct: 463 GKSSPSALREAVVETPNTTWS----DIGGLQNVKREL-QELVQYPVEHPEKYLKFGMQPS 517
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
+G+L YGPPG GKTL+A+ I A I GP++L + GESEAN+R +F ++
Sbjct: 518 RGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEANVRDVF-----DK 571
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTG--VHDTVVNQLLSKIDGVDQLNNILVIG 366
R A ++ FDE+D+I KARG G G D V+NQ+L+++DG++ N+ +IG
Sbjct: 572 ARAAAPC---VLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIG 628
Query: 367 MTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELAT 426
TNR D+ID A+LRPGRL+ + I LPDE R QIL ++ +++D+D LA
Sbjct: 629 ATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRK----TPLSKDLDLTFLAK 684
Query: 427 LTKNFSGAELEGLVRAAQSTAMNRLIKASSKVE 459
T FSGA+L + + A A+ I+ ++E
Sbjct: 685 NTVGFSGADLTEICQRACKLAIRESIEKEIRIE 717
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 162 bits (394), Expect = 8e-40
Identities = 111/335 (33%), Positives = 167/335 (49%), Gaps = 20/335 (5%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
P++ + +G K +GILL+GPPGTGKTL+AR + A ++NGP+I+ K GESE+N
Sbjct: 232 PQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFF-FLINGPEIMSKMSGESESN 290
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV 356
+R+ FA+ E+ I+ DEIDAI R G V +V+QLL+ +DG+
Sbjct: 291 LRKAFAECEKNSPA--------ILFIDEIDAIAPKREKAHGE--VEKRIVSQLLTLMDGL 340
Query: 357 DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIA 416
+++VI TNR + ID AL R GR + +++IG+PD GR++IL IHTK M K+
Sbjct: 341 KTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNM----KLG 396
Query: 417 EDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVE--VDPEAMEKLMVERTD 474
EDVD ++A F GA+L L A + ++ + +D E + L V +
Sbjct: 397 EDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMEN 456
Query: 475 FLHALENDIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLV-- 532
F A+ A + + I + + E Q ++ G+
Sbjct: 457 FRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPS 516
Query: 533 -SVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VL GPP GKT LA +A F+ + PE
Sbjct: 517 RGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 551
Score = 153 bits (371), Expect = 5e-37
Identities = 100/273 (36%), Positives = 150/273 (54%), Gaps = 22/273 (8%)
Query: 191 IGKAKGKQPRQSII---NPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKH 247
+GK+ R++++ N W IGGL N + + V PE + G +
Sbjct: 461 MGKSSPSALREAVVETPNTTWS----DIGGLQNVKREL-QELVQYPVEHPEKYLKFGMQP 515
Query: 248 VKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEE 307
+G+L YGPPG GKTL+A+ I A I GP++L + GESEAN+R +F +
Sbjct: 516 SRGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEANVRDVF-----D 569
Query: 308 EKRCGANSGLHIIIFDEIDAICKARG-SVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIG 366
+ R A ++ FDE+D+I KARG SVG G D V+NQ+L+++DG++ N+ +IG
Sbjct: 570 KARAAAPC---VLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIG 626
Query: 367 MTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELAT 426
TNR D+ID A+LRPGRL+ + I LPDE R+QI ++ ++ D+D LA
Sbjct: 627 ATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRK----TPLSADLDLNFLAK 682
Query: 427 LTKNFSGAELEGLVRAAQSTAMNRLIKASSKVE 459
T FSGA+L + + A A+ I+ + E
Sbjct: 683 NTVGFSGADLTEICQRACKLAIRESIEREIRQE 715
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 162 bits (394), Expect = 8e-40
Identities = 111/335 (33%), Positives = 167/335 (49%), Gaps = 20/335 (5%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
P++ + +G K +GILL+GPPGTGKTL+AR + A ++NGP+I+ K GESE+N
Sbjct: 232 PQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFF-FLINGPEIMSKMSGESESN 290
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV 356
+R+ FA+ E+ I+ DEIDAI R G V +V+QLL+ +DG+
Sbjct: 291 LRKAFAECEKNSPA--------ILFIDEIDAIAPKREKAHGE--VEKRIVSQLLTLMDGL 340
Query: 357 DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIA 416
+++VI TNR + ID AL R GR + +++IG+PD GR++IL IHTK M K+
Sbjct: 341 KTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNM----KLG 396
Query: 417 EDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVE--VDPEAMEKLMVERTD 474
EDVD ++A F GA+L L A + ++ + +D E + L V +
Sbjct: 397 EDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMEN 456
Query: 475 FLHALENDIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEASGLV-- 532
F A+ A + + I + + E Q ++ G+
Sbjct: 457 FRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPS 516
Query: 533 -SVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VL GPP GKT LA +A F+ + PE
Sbjct: 517 RGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 551
Score = 153 bits (371), Expect = 5e-37
Identities = 100/273 (36%), Positives = 150/273 (54%), Gaps = 22/273 (8%)
Query: 191 IGKAKGKQPRQSII---NPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKH 247
+GK+ R++++ N W IGGL N + + V PE + G +
Sbjct: 461 MGKSSPSALREAVVETPNTTWS----DIGGLQNVKREL-QELVQYPVEHPEKYLKFGMQP 515
Query: 248 VKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEE 307
+G+L YGPPG GKTL+A+ I A I GP++L + GESEAN+R +F +
Sbjct: 516 SRGVLFYGPPGCGKTLLAKAIANECQANFISI-KGPELLTMWFGESEANVRDVF-----D 569
Query: 308 EKRCGANSGLHIIIFDEIDAICKARG-SVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIG 366
+ R A ++ FDE+D+I KARG SVG G D V+NQ+L+++DG++ N+ +IG
Sbjct: 570 KARAAAPC---VLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIG 626
Query: 367 MTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELAT 426
TNR D+ID A+LRPGRL+ + I LPDE R+QI ++ ++ D+D LA
Sbjct: 627 ATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRK----TPLSADLDLNFLAK 682
Query: 427 LTKNFSGAELEGLVRAAQSTAMNRLIKASSKVE 459
T FSGA+L + + A A+ I+ + E
Sbjct: 683 NTVGFSGADLTEICQRACKLAIRESIEREIRQE 715
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 148 bits (358), Expect = 2e-35
Identities = 95/256 (37%), Positives = 141/256 (55%), Gaps = 14/256 (5%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
PE E+ G GILLYGPPG KTL+AR + V GP++ K+VG+SE
Sbjct: 482 PEAFERFGIDPPAGILLYGPPGCSKTLIARALASEAKMNF-LAVKGPELFSKWVGDSEKA 540
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV 356
IR LF+ A + I+ FDEIDA+ +RGS ++GV D V+ QLL+++DG+
Sbjct: 541 IRDLFSRARQVAPT--------IVFFDEIDAVGSSRGSEK-SSGVSDRVLAQLLTELDGL 591
Query: 357 DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIA 416
++ + ++++ TNR D +D ALLRPGRL+ + +GLP E R IL + TK+M+ +
Sbjct: 592 EKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGLPCEVTRRAILEMRTKKMK-FDDTV 650
Query: 417 EDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVERTD-F 475
+D +L T +SGAEL + R A AM I A+ E +V RT+ +
Sbjct: 651 RTID--KLVEKTSGYSGAELVAVCRTAAMFAMRESIDATIVQWTHFEQALAAVVSRTEAY 708
Query: 476 LHALENDIKPAFGTSA 491
L + +D K ++A
Sbjct: 709 LLEIYDDFKAGRASNA 724
Score = 34.7 bits (76), Expect = 0.29
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 251 ILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEE-EEK 309
+L++G PG+GKTL+ +++ +L+ I + ++++ G + NI + D E E++
Sbjct: 275 VLIWGLPGSGKTLLLKEVALVLSGSTTYIGSCEELME-LNGVTTGNI--VIVDVNELEKE 331
Query: 310 RCGANSGLHIIIFDE 324
AN L ++ DE
Sbjct: 332 NTKANRALSFLLGDE 346
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 146 bits (355), Expect = 4e-35
Identities = 91/236 (38%), Positives = 134/236 (56%), Gaps = 17/236 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGLD + I + V PE+ + LG KG+LLYGPPGTGKTL+AR +
Sbjct: 156 VGGLDTQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTEC 214
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
+ V+G +++ K++GE +R LF A E II DEID+I +R
Sbjct: 215 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRVE 265
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
GS GG++ V T++ +LL+++DG + NI VI TNR D++D ALLRPGR++ ++E
Sbjct: 266 GSRGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPA 324
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAM 448
PDEK R QIL IH+++M + I D ++A SGAE++ + A A+
Sbjct: 325 PDEKARAQILKIHSRKMNLMRGIRMD----KIAEQIPGASGAEVKSVCTEAGMFAL 376
Score = 33.5 bits (73), Expect = 0.66
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 509 VSSIFEDGQLYIQQARATEASGLVS---VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSP 565
+ I E +L ++ +A G+ VLL GPP +GKT LA +A ++ F++V
Sbjct: 163 IKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGS 222
Query: 566 E 566
E
Sbjct: 223 E 223
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 146 bits (355), Expect = 4e-35
Identities = 91/236 (38%), Positives = 134/236 (56%), Gaps = 17/236 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGLD + I + V PE+ + LG KG+LLYGPPGTGKTL+AR +
Sbjct: 177 VGGLDTQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTEC 235
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
+ V+G +++ K++GE +R LF A E II DEID+I +R
Sbjct: 236 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRVE 286
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
GS GG++ V T++ +LL+++DG + NI VI TNR D++D ALLRPGR++ ++E
Sbjct: 287 GSRGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPA 345
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAM 448
PDEK R QIL IH+++M + I D ++A SGAE++ + A A+
Sbjct: 346 PDEKARAQILKIHSRKMNLMRGIRMD----KIAEQIPGASGAEVKSVCTEAGMFAL 397
Score = 33.5 bits (73), Expect = 0.66
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 509 VSSIFEDGQLYIQQARATEASGLVS---VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSP 565
+ I E +L ++ +A G+ VLL GPP +GKT LA +A ++ F++V
Sbjct: 184 IKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGS 243
Query: 566 E 566
E
Sbjct: 244 E 244
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 146 bits (354), Expect = 6e-35
Identities = 96/256 (37%), Positives = 141/256 (55%), Gaps = 21/256 (8%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GG ++ + R + + PE LG + KG+LLYGPPGTGKTL AR + +A
Sbjct: 179 VGGCKDQIEKL-REVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDA 237
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
+++ G +++ KYVGE +R LF A + K C +I FDEIDA+ AR
Sbjct: 238 CFIRVI-GSELVQKYVGEGARMVRELFEMARTK-KAC-------LIFFDEIDAVGGARFD 288
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
GG+ V T++ +L++++DG D NI V+ TNR D +D AL+RPGRL+ ++E L
Sbjct: 289 DGQGGDNEVQRTML-ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFAL 347
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLI 452
PD GR IL IH K+M + I D+ LA L N +GAE+ + A A I
Sbjct: 348 PDLAGRAHILKIHAKQMSVERDIRYDL----LARLCPNSTGAEIRSVCTEAGMFA----I 399
Query: 453 KASSKVEVDPEAMEKL 468
+A KV + + +E +
Sbjct: 400 RARRKVATEKDFLEAI 415
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VLL GPP +GKT A +A +D F++V E
Sbjct: 214 VLLYGPPGTGKTLCARAVANRTDACFIRVIGSE 246
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 144 bits (349), Expect = 2e-34
Identities = 91/253 (35%), Positives = 142/253 (56%), Gaps = 19/253 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGL + + R + PE+ +++G KG LL+GPPGTGKTL+AR + L+
Sbjct: 144 VGGLAEQIREL-REVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDC 202
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
K+V+ I+DKY+GES IR +F A + + C I+ DEIDAI R S
Sbjct: 203 NFLKVVSSA-IVDKYIGESARMIREMFNYARDHQP-C-------IVFMDEIDAIGGRRFS 253
Query: 335 VGGNTGVH-DTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLP 393
G + + +LL+++DG D L + VI TNR D +D ALLRPGRL+ ++EIGLP
Sbjct: 254 EGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLP 313
Query: 394 DEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIK 453
+E+ R++IL IH+ ++ ++ ++D + L+ FS A+L + A A I+
Sbjct: 314 NEQSRLEILKIHSNKITKH----GEIDFEAVVKLSDGFSAADLRNVCTEAGMFA----IR 365
Query: 454 ASSKVEVDPEAME 466
A + +D + M+
Sbjct: 366 AEREFVIDEDFMK 378
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDFPFVKVCS 564
LL GPP +GKT LA +A D F+KV S
Sbjct: 180 LLFGPPGTGKTLLARAVASQLDCNFLKVVS 209
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 144 bits (349), Expect = 2e-34
Identities = 91/253 (35%), Positives = 142/253 (56%), Gaps = 19/253 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGL + + R + PE+ +++G KG LL+GPPGTGKTL+AR + L+
Sbjct: 152 VGGLAEQIREL-REVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDC 210
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
K+V+ I+DKY+GES IR +F A + + C I+ DEIDAI R S
Sbjct: 211 NFLKVVSSA-IVDKYIGESARMIREMFNYARDHQP-C-------IVFMDEIDAIGGRRFS 261
Query: 335 VGGNTGVH-DTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLP 393
G + + +LL+++DG D L + VI TNR D +D ALLRPGRL+ ++EIGLP
Sbjct: 262 EGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLP 321
Query: 394 DEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIK 453
+E+ R++IL IH+ ++ ++ ++D + L+ FS A+L + A A I+
Sbjct: 322 NEQSRLEILKIHSNKITKH----GEIDFEAVVKLSDGFSAADLRNVCTEAGMFA----IR 373
Query: 454 ASSKVEVDPEAME 466
A + +D + M+
Sbjct: 374 AEREFVIDEDFMK 386
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDFPFVKVCS 564
LL GPP +GKT LA +A D F+KV S
Sbjct: 188 LLFGPPGTGKTLLARAVASQLDCNFLKVVS 217
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 142 bits (345), Expect = 7e-34
Identities = 87/236 (36%), Positives = 133/236 (56%), Gaps = 17/236 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGLD + I + V PE+ + LG KG+LL+GPPGTGKTL+AR +
Sbjct: 161 VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTEC 219
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
+ V+G +++ K++GE +R LF A E II DEID+I +R
Sbjct: 220 TFIR-VSGSELVQKFIGEGARMVRELFVMAREHAPS--------IIFMDEIDSIGSSRVE 270
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
GS GG++ V T++ +LL+++DG + NI VI TNR D++D ALLRPGR++ ++E
Sbjct: 271 GSSGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPA 329
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAM 448
PDEK R IL IH+++M + ++ ++A SGAE++ + A A+
Sbjct: 330 PDEKARADILKIHSRKM----NLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFAL 381
Score = 33.1 bits (72), Expect = 0.88
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 509 VSSIFEDGQLYIQQARATEASGLVS---VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSP 565
+ I E +L ++ +A G+ VLL GPP +GKT LA +A ++ F++V
Sbjct: 168 IKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGS 227
Query: 566 E 566
E
Sbjct: 228 E 228
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1 protein.
Length = 1291
Score = 142 bits (343), Expect = 1e-33
Identities = 117/389 (30%), Positives = 179/389 (46%), Gaps = 34/389 (8%)
Query: 170 GRLLPD--ASVQFDKAENSSLNLIGKAKGKQPRQSI--INPDWDFGKMGIGGLDNEFNAI 225
GR +P + A++ ++ + K Q I ++ D G +GGL + ++
Sbjct: 344 GRFMPINMTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSSVGFDQVGGLGHHIQSL 403
Query: 226 FRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIV----N 281
++P EV E+ KG++ YGPPGTGKTL+AR + K+
Sbjct: 404 KEVVLFPMLYP-EVFEKFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRK 462
Query: 282 GPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGV 341
G L K+VGESE +R LF A II FDEID + R S +
Sbjct: 463 GADCLSKWVGESERQLRLLFDQAYAMRPS--------IIFFDEIDGLAPVRSSKQDQ--I 512
Query: 342 HDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQI 401
H ++V+ LL+ +DG+D ++VIG TNR D +D AL RPGR + ++ LPD R QI
Sbjct: 513 HASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQI 572
Query: 402 LNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMN----RLIKASSK 457
L+IHT + E K I E +D+ +A T + GA+L+ L A + + S +
Sbjct: 573 LDIHTSKWEENKPIPETLDA--IAERTSGYCGADLKFLCTEAVLIGLRSRYPHIYMCSER 630
Query: 458 VEVDPEAMEKLMVERTDFLHALENDIKPAFGTSAEALEHFL-ARGIVNWGSPVSSIFE-- 514
+++D + + + F HA+ I PA L R + G VS++
Sbjct: 631 LKLD---VATIKITSEHFGHAMRR-ITPASRRDLTIPSRPLDERTSILLGDTVSNLISLR 686
Query: 515 --DGQLYIQQARATEASGLVSVLLEGPPN 541
G ++ A AT +S L V+ PN
Sbjct: 687 IPQGYRCVENAMATASSELEQVVRALEPN 715
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1 protein.
Length = 1291
Score = 142 bits (343), Expect = 1e-33
Identities = 117/389 (30%), Positives = 179/389 (46%), Gaps = 34/389 (8%)
Query: 170 GRLLPD--ASVQFDKAENSSLNLIGKAKGKQPRQSI--INPDWDFGKMGIGGLDNEFNAI 225
GR +P + A++ ++ + K Q I ++ D G +GGL + ++
Sbjct: 344 GRFMPINMTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSSVGFDQVGGLGHHIQSL 403
Query: 226 FRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIV----N 281
++P EV E+ KG++ YGPPGTGKTL+AR + K+
Sbjct: 404 KEVVLFPMLYP-EVFEKFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRK 462
Query: 282 GPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGV 341
G L K+VGESE +R LF A II FDEID + R S +
Sbjct: 463 GADCLSKWVGESERQLRLLFDQAYAMRPS--------IIFFDEIDGLAPVRSSKQDQ--I 512
Query: 342 HDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQI 401
H ++V+ LL+ +DG+D ++VIG TNR D +D AL RPGR + ++ LPD R QI
Sbjct: 513 HASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQI 572
Query: 402 LNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMN----RLIKASSK 457
L+IHT + E K I E +D+ +A T + GA+L+ L A + + S +
Sbjct: 573 LDIHTSKWEENKPIPETLDA--IAERTSGYCGADLKFLCTEAVLIGLRSRYPHIYMCSER 630
Query: 458 VEVDPEAMEKLMVERTDFLHALENDIKPAFGTSAEALEHFL-ARGIVNWGSPVSSIFE-- 514
+++D + + + F HA+ I PA L R + G VS++
Sbjct: 631 LKLD---VATIKITSEHFGHAMRR-ITPASRRDLTIPSRPLDERTSILLGDTVSNLISLR 686
Query: 515 --DGQLYIQQARATEASGLVSVLLEGPPN 541
G ++ A AT +S L V+ PN
Sbjct: 687 IPQGYRCVENAMATASSELEQVVRALEPN 715
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 142 bits (343), Expect = 1e-33
Identities = 117/389 (30%), Positives = 179/389 (46%), Gaps = 34/389 (8%)
Query: 170 GRLLPD--ASVQFDKAENSSLNLIGKAKGKQPRQSI--INPDWDFGKMGIGGLDNEFNAI 225
GR +P + A++ ++ + K Q I ++ D G +GGL + ++
Sbjct: 344 GRFMPINMTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSSVGFDQVGGLGHHIQSL 403
Query: 226 FRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIV----N 281
++P EV E+ KG++ YGPPGTGKTL+AR + K+
Sbjct: 404 KEVVLFPMLYP-EVFEKFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKVAFFMRK 462
Query: 282 GPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGV 341
G L K+VGESE +R LF A II FDEID + R S +
Sbjct: 463 GADCLSKWVGESERQLRLLFDQAYAMRPS--------IIFFDEIDGLAPVRSSKQDQ--I 512
Query: 342 HDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQI 401
H ++V+ LL+ +DG+D ++VIG TNR D +D AL RPGR + ++ LPD R QI
Sbjct: 513 HASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQI 572
Query: 402 LNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMN----RLIKASSK 457
L+IHT + E K I E +D+ +A T + GA+L+ L A + + S +
Sbjct: 573 LDIHTSKWEENKPIPETLDA--IAERTSGYCGADLKFLCTEAVLIGLRSRYPHIYMCSER 630
Query: 458 VEVDPEAMEKLMVERTDFLHALENDIKPAFGTSAEALEHFL-ARGIVNWGSPVSSIFE-- 514
+++D + + + F HA+ I PA L R + G VS++
Sbjct: 631 LKLD---VATIKITSEHFGHAMRR-ITPASRRDLTIPSRPLDERTSILLGDTVSNLISLR 686
Query: 515 --DGQLYIQQARATEASGLVSVLLEGPPN 541
G ++ A AT +S L V+ PN
Sbjct: 687 IPQGYRCVENAMATASSELEQVVRALEPN 715
>Z70205-4|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4 protein.
Length = 996
Score = 138 bits (334), Expect = 2e-32
Identities = 85/236 (36%), Positives = 134/236 (56%), Gaps = 17/236 (7%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
P++ E +G KGILL+GP G GKTL+A N V GP++L KY+G SE N
Sbjct: 751 PQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSNFSVVN-VKGPELLSKYIGASEEN 809
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV 356
+R +F E+ + C I+ FDE+D++ RG +TGV D VVNQLL+++DG
Sbjct: 810 VRLVF----EKARSCAPC----ILFFDELDSLAPKRGH--DSTGVTDRVVNQLLTELDGA 859
Query: 357 DQ-LNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKI 415
+ + ++++G T+R D+ID+ALLRPGR + + G P++ R+ I+ + T +++
Sbjct: 860 EGGMKGVIILGCTSRIDLIDDALLRPGRFDHHVYCGHPEKTERLDIMKVLTNKLK----- 914
Query: 416 AEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVE 471
DVD LA T +SGA+L+ L AQ ++ K +E D +++ +E
Sbjct: 915 PTDVDFECLAQKTDGWSGADLQLLFTNAQFYNARQIAKEEDGLEEDNVPIDQASIE 970
Score = 31.9 bits (69), Expect = 2.0
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYKTHGAK 593
+LL GP GKT LA S+F V V PE + + ++ +R V EK ++
Sbjct: 765 ILLHGPSGCGKTLLANATISNSNFSVVNVKGPELLSKYIGASE-ENVRLVFEKARS---- 819
Query: 594 LTECAPC 600
CAPC
Sbjct: 820 ---CAPC 823
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 138 bits (334), Expect = 2e-32
Identities = 85/236 (36%), Positives = 134/236 (56%), Gaps = 17/236 (7%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEAN 296
P++ E +G KGILL+GP G GKTL+A N V GP++L KY+G SE N
Sbjct: 751 PQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSNFSVVN-VKGPELLSKYIGASEEN 809
Query: 297 IRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV 356
+R +F E+ + C I+ FDE+D++ RG +TGV D VVNQLL+++DG
Sbjct: 810 VRLVF----EKARSCAPC----ILFFDELDSLAPKRGH--DSTGVTDRVVNQLLTELDGA 859
Query: 357 DQ-LNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKI 415
+ + ++++G T+R D+ID+ALLRPGR + + G P++ R+ I+ + T +++
Sbjct: 860 EGGMKGVIILGCTSRIDLIDDALLRPGRFDHHVYCGHPEKTERLDIMKVLTNKLK----- 914
Query: 416 AEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVE 471
DVD LA T +SGA+L+ L AQ ++ K +E D +++ +E
Sbjct: 915 PTDVDFECLAQKTDGWSGADLQLLFTNAQFYNARQIAKEEDGLEEDNVPIDQASIE 970
Score = 31.9 bits (69), Expect = 2.0
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYKTHGAK 593
+LL GP GKT LA S+F V V PE + + ++ +R V EK ++
Sbjct: 765 ILLHGPSGCGKTLLANATISNSNFSVVNVKGPELLSKYIGASE-ENVRLVFEKARS---- 819
Query: 594 LTECAPC 600
CAPC
Sbjct: 820 ---CAPC 823
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 138 bits (333), Expect = 2e-32
Identities = 82/236 (34%), Positives = 133/236 (56%), Gaps = 17/236 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
+GGLD + I + A + PE E++G + KG++LYG PGTGKTL+A+ + +A
Sbjct: 190 VGGLDQQIQEI-KEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSA 248
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
+IV G +++ KY+G+ +R LF AEE I+ DEIDA+ R
Sbjct: 249 TFLRIV-GSELIQKYLGDGPKMVRELFRVAEENAPS--------IVFIDEIDAVGTKRYD 299
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
+ GG + T++ +LL+++DG D ++ V+ TNR + +D AL+RPGR++ ++E L
Sbjct: 300 SNSGGEREIQRTML-ELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPL 358
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAM 448
PDEK + +I IHT RM + ++V+ E T SGA+++ + A A+
Sbjct: 359 PDEKTKRRIFQIHTSRM----TLGKEVNLEEFITAKDELSGADIKAMCTEAGLLAL 410
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 128 bits (310), Expect = 1e-29
Identities = 101/325 (31%), Positives = 162/325 (49%), Gaps = 30/325 (9%)
Query: 148 LEAVD----VVALAAGANAVPRRVRM---GRLLPDASVQFDKAENSSLNLIGKAKGK--Q 198
LEAVD +V G+N R + + L P SV K N+ ++++ Q
Sbjct: 89 LEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQ 148
Query: 199 PRQSIINPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPG 258
+ PD +G IGGLD + + R A + E+ +Q+G +G+L+YGPPG
Sbjct: 149 MLRPDEKPDISYGD--IGGLDMQKQEV-REAVELPLTHGELYQQIGIDPPRGVLMYGPPG 205
Query: 259 TGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLH 318
GKT++A+ + A ++V G + + KY+GE +R +F A+E
Sbjct: 206 CGKTMLAKAVAANTAASFIRVV-GSEFVQKYLGEGPRMVRDVFRLAKENSPS-------- 256
Query: 319 IIIFDEIDAICKAR--GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDE 376
II DEIDAI R G + V ++ +LL+++DG DQ N+ VI TNR+D +D
Sbjct: 257 IIFIDEIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQSTNVKVIMATNRQDTLDP 315
Query: 377 ALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAEL 436
ALLRPGRL+ ++E LPD + + + + RM +++DVD + SGA++
Sbjct: 316 ALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRM----NLSDDVDLEDWVARPDKISGADI 371
Query: 437 EGLVRAA--QSTAMNRLIKASSKVE 459
+ + A Q+ NR + + +E
Sbjct: 372 NSICQEAGMQAVRENRYVVLTKDLE 396
Score = 29.9 bits (64), Expect = 8.2
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 516 GQLYIQQARATEASGLVSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
G+LY QQ G VL+ GPP GKT LA +A + F++V E
Sbjct: 184 GELY-QQIGIDPPRG---VLMYGPPGCGKTMLAKAVAANTAASFIRVVGSE 230
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 128 bits (310), Expect = 1e-29
Identities = 82/238 (34%), Positives = 129/238 (54%), Gaps = 17/238 (7%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGG D + + V LG KG+L+YGPPGTGKT+MAR + +
Sbjct: 179 IGGCDKQIQELIEAVVLPMTHKDRFVN-LGIHPPKGVLMYGPPGTGKTMMARAVAAQTKS 237
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-- 332
K+ GPQ++ ++G+ +R FA A+E+ II DE+DAI R
Sbjct: 238 TFLKLA-GPQLVQMFIGDGAKLVRDAFALAKEKAPA--------IIFIDELDAIGTKRFD 288
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGL 392
G+ V T++ +LL+++DG ++I VI TNR D++D ALLR GRL+ ++E+
Sbjct: 289 SEKAGDREVQRTML-ELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPH 347
Query: 393 PDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQSTAMNR 450
P+E R +I+ IH+++M + +DV+ ELA T +F+GA+ + + A A+ R
Sbjct: 348 PNEDARARIMQIHSRKM----NVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRR 401
Score = 31.9 bits (69), Expect = 2.0
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
VL+ GPP +GKT +A +A + F+K+ P+
Sbjct: 214 VLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQ 246
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 127 bits (306), Expect = 4e-29
Identities = 79/214 (36%), Positives = 120/214 (56%), Gaps = 15/214 (7%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
+GILL GPPG GKTL+A+ + V GP++L+ YVGESE +R +F A + +
Sbjct: 569 QGILLCGPPGCGKTLLAKAVANETGMNFIS-VKGPELLNMYVGESERAVRTVFQRARDSQ 627
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMT 368
C +I FDEIDA+ R + G +VNQLL+++DGV+ + +IG T
Sbjct: 628 P-C-------VIFFDEIDALVPKRSHGESSGGAR--LVNQLLTEMDGVEGRQKVFLIGAT 677
Query: 369 NRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLT 428
NR D++D A+LRPGRL+ + + P + RV IL TK + ED+D E+A L
Sbjct: 678 NRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTR-PMLGEDIDFHEIAQLP 736
Query: 429 K--NFSGAELEGLVRAAQSTAMN-RLIKASSKVE 459
+ F+GA+L L+ + A+ R+++ V+
Sbjct: 737 ELAGFTGADLAALIHESSLLALQARVLENDESVK 770
Score = 98.7 bits (235), Expect = 2e-20
Identities = 122/436 (27%), Positives = 189/436 (43%), Gaps = 83/436 (19%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGG D +F + R A + P+ LG +G +++GPPG GKT+ A+ + L
Sbjct: 208 IGGADRQFLEVCR--LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGELAI 265
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
++ +++ GE+E IRRLF D ++ C I+I D+IDAI R +
Sbjct: 266 PMLQLA-ATELVSGVSGETEEKIRRLF-DTAKQNSPC-------ILILDDIDAIAPRRET 316
Query: 335 VGGNTGVHDTVVNQLLSKIDGV----------DQLN-------------------NILVI 365
+ VV+QL S +D + DQL +LVI
Sbjct: 317 A--QREMERRVVSQLCSSLDELVLPPREKPLKDQLTFGDDGSVAIIGDSPTAAGAGVLVI 374
Query: 366 GMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELA 425
G T+R D +D L R GR E ++ +G+PDE R +IL K +A DV ++A
Sbjct: 375 GTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICK-----VNLAGDVTLKQIA 429
Query: 426 TLTKNFSGAELEGLVRAAQSTAMNRLIKA---------SSKVEVDPEAMEKLMV-----E 471
LT + GA+L+ L+R A A++R+ + VE E +++++ +
Sbjct: 430 KLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNEGHKNLTVEQIKEELDRVLAWLQGDD 489
Query: 472 RTDFLHALENDIKPAFGTSAEAL---------EHFLARGIVNWGS-----PVSSIFEDGQ 517
L L ++ +F AL E F V+W V E
Sbjct: 490 DPSALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSI 549
Query: 518 LY-IQQARATEASGL----VSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDM---V 569
LY I++A A G+ +LL GPP GKT LA +A + F+ V PE + V
Sbjct: 550 LYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYV 609
Query: 570 GFTETAKCLQIRKVRE 585
G +E A ++ R+
Sbjct: 610 GESERAVRTVFQRARD 625
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 126 bits (305), Expect = 5e-29
Identities = 80/211 (37%), Positives = 118/211 (55%), Gaps = 16/211 (7%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEA 295
P+ + LG K KG +L GPPGTGKTL+A+ N P I V+G + L+ +VG A
Sbjct: 315 PQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEANV--PFITVSGSEFLEMFVGVGPA 372
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTG--VHDTVVNQLLSKI 353
+R +F+ A + C I+ DEIDA+ + RG GG G + +NQLL ++
Sbjct: 373 RVRDMFSMARKNSP-C-------ILFIDEIDAVGRKRGGKGGMGGHSEQENTLNQLLVEM 424
Query: 354 DG-VDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREY 412
DG ++++VI TNR D++D ALLRPGR + Q+ + +PD KGR I +H +R
Sbjct: 425 DGFTTDESSVIVIAATNRVDILDSALLRPGRFDRQIYVPVPDIKGRASIFRVHLGPLR-- 482
Query: 413 KKIAEDVDSMELATLTKNFSGAELEGLVRAA 443
+ + V S +LA T FSGA++ + A
Sbjct: 483 TSLDKTVLSRKLAAHTPGFSGADISNVCNEA 513
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDFPFVKVCSPE 566
+L GPP +GKT LA A ++ PF+ V E
Sbjct: 330 ILTGPPGTGKTLLAKATAGEANVPFITVSGSE 361
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 123 bits (296), Expect = 6e-28
Identities = 78/214 (36%), Positives = 118/214 (55%), Gaps = 15/214 (7%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
+GILL GPPG GKTL+A+ + V GP++L+ YVGESE +R +F A + +
Sbjct: 569 QGILLCGPPGCGKTLLAKAVANETGMNFFS-VKGPELLNMYVGESERAVRTVFQRARDSQ 627
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMT 368
C +I FDEIDA+ R + G +VNQLL+++DGV+ + +IG T
Sbjct: 628 P-C-------VIFFDEIDALVPKRSHGESSGGAR--LVNQLLTEMDGVEGRQKVFLIGAT 677
Query: 369 NRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLT 428
NR D++D A+LRPGRL+ + + P + RV IL TK + ED+D E+A L
Sbjct: 678 NRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTR-PMLGEDIDFHEIAQLP 736
Query: 429 K--NFSGAELEGLVRAAQSTAMN-RLIKASSKVE 459
+ F+GA+L + A+ R+++ V+
Sbjct: 737 ELAGFTGADLAVFIHELSLLALQARVLENDESVK 770
Score = 95.5 bits (227), Expect = 1e-19
Identities = 121/436 (27%), Positives = 188/436 (43%), Gaps = 83/436 (19%)
Query: 215 IGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNA 274
IGG D +F + R A + P+ LG +G +++GPPG GKT+ A+ + L
Sbjct: 208 IGGADRQFLEVCR--LAMHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGELAI 265
Query: 275 REPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGS 334
++ +++ GE+E IRRLF D ++ C I+I D+IDAI R +
Sbjct: 266 PMLQLA-ATELVSGVSGETEEKIRRLF-DTAKQNSPC-------ILILDDIDAIAPRRET 316
Query: 335 VGGNTGVHDTVVNQLLSKIDGV----------DQLN-------------------NILVI 365
+ VV+QL S +D + DQL +LVI
Sbjct: 317 A--QREMERRVVSQLCSSLDELVLPPREKPLKDQLTFGDDGSVAIIGDSPTAAGAGVLVI 374
Query: 366 GMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELA 425
G T+R D +D L R GR + ++ +G+PDE R +IL K +A DV ++A
Sbjct: 375 GTTSRPDAVDGRLRRTGRFQNEISLGIPDETAREKILEKICK-----VNLAGDVTLKQIA 429
Query: 426 TLTKNFSGAELEGLVRAAQSTAMNRLIKA---------SSKVEVDPEAMEKLMV-----E 471
LT + GA+L+ L+R A A++R+ + VE E +++++ +
Sbjct: 430 KLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNEGHKNLTVEQIKEELDRVLAWLQGDD 489
Query: 472 RTDFLHALENDIKPAFGTSAEAL---------EHFLARGIVNWGS-----PVSSIFEDGQ 517
L L ++ +F AL E F V+W V E
Sbjct: 490 DPSALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSI 549
Query: 518 LY-IQQARATEASGL----VSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDM---V 569
LY I++A A G+ +LL GPP GKT LA +A + F V PE + V
Sbjct: 550 LYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFFSVKGPELLNMYV 609
Query: 570 GFTETAKCLQIRKVRE 585
G +E A ++ R+
Sbjct: 610 GESERAVRTVFQRARD 625
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 122 bits (294), Expect = 1e-27
Identities = 75/209 (35%), Positives = 123/209 (58%), Gaps = 17/209 (8%)
Query: 250 GILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEK 309
GI+LYG PG GKTL+A+ + V GP++L+KYVG+SE N+R++F A++
Sbjct: 495 GIILYGSPGCGKTLIAKAVATEFKIAFLS-VKGPELLNKYVGQSEENLRKVFERAKQASP 553
Query: 310 RCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV--DQLNNILVIGM 367
C +I FDEID++ RG G + GV D +V+QLL+++D + L + V+G
Sbjct: 554 -C-------VIFFDEIDSLAPNRGRNGDSGGVIDRIVSQLLAELDKLHNSPLTKVFVMGA 605
Query: 368 TNRRDMIDEALLRPGRLEVQMEIGL-PDEKGRVQILNIHTKRMREYKKIAEDVDSMELAT 426
TNR D++D +L+ PGR + +E+ D + + +IL +++MR EDVD E+A+
Sbjct: 606 TNRPDLLDNSLMTPGRFDKLVEVKPGEDVESKTKILEAVSRKMR----FEEDVDLREIAS 661
Query: 427 -LTKNFSGAELEGLVRAAQSTAMNRLIKA 454
+ + SGA+L ++ A A+ I++
Sbjct: 662 KVDEKMSGAQLFSIISNAGMAAIVETIQS 690
Score = 32.3 bits (70), Expect = 1.5
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 14/188 (7%)
Query: 405 HTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQS----TAMNRLIKASSKVEV 460
+ K + Y AE +D + T + + +L V S + +L+K KV++
Sbjct: 372 NVKNLALYTFSAEFMDENDRKTWLQYYLNEKLANHVAKKTSGFTLAELEKLVKNGKKVKI 431
Query: 461 DPEAMEKLMVERTDFLHALENDIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYI 520
+ E EK+ D + ++ A G A + + + ++ E + +
Sbjct: 432 E-EKEEKVY---EDLIDKRNSNFADAIG--APKIPNVRWEDVGGLEETKQTVLESIRTNL 485
Query: 521 QQARATEASGLVSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQI 580
+RA + SG++ L G P GKT +A +A F+ V PE + + ++ +
Sbjct: 486 FGSRALKRSGII---LYGSPGCGKTLIAKAVATEFKIAFLSVKGPELLNKYVGQSE-ENL 541
Query: 581 RKVREKYK 588
RKV E+ K
Sbjct: 542 RKVFERAK 549
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 122 bits (294), Expect = 1e-27
Identities = 75/209 (35%), Positives = 123/209 (58%), Gaps = 17/209 (8%)
Query: 250 GILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEK 309
GI+LYG PG GKTL+A+ + V GP++L+KYVG+SE N+R++F A++
Sbjct: 495 GIILYGSPGCGKTLIAKAVATEFKIAFLS-VKGPELLNKYVGQSEENLRKVFERAKQASP 553
Query: 310 RCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV--DQLNNILVIGM 367
C +I FDEID++ RG G + GV D +V+QLL+++D + L + V+G
Sbjct: 554 -C-------VIFFDEIDSLAPNRGRNGDSGGVIDRIVSQLLAELDKLHNSPLTKVFVMGA 605
Query: 368 TNRRDMIDEALLRPGRLEVQMEIGL-PDEKGRVQILNIHTKRMREYKKIAEDVDSMELAT 426
TNR D++D +L+ PGR + +E+ D + + +IL +++MR EDVD E+A+
Sbjct: 606 TNRPDLLDNSLMTPGRFDKLVEVKPGEDVESKTKILEAVSRKMR----FEEDVDLREIAS 661
Query: 427 -LTKNFSGAELEGLVRAAQSTAMNRLIKA 454
+ + SGA+L ++ A A+ I++
Sbjct: 662 KVDEKMSGAQLFSIISNAGMAAIVETIQS 690
Score = 32.3 bits (70), Expect = 1.5
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 14/188 (7%)
Query: 405 HTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQS----TAMNRLIKASSKVEV 460
+ K + Y AE +D + T + + +L V S + +L+K KV++
Sbjct: 372 NVKNLALYTFSAEFMDENDRKTWLQYYLNEKLANHVAKKTSGFTLAELEKLVKNGKKVKI 431
Query: 461 DPEAMEKLMVERTDFLHALENDIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYI 520
+ E EK+ D + ++ A G A + + + ++ E + +
Sbjct: 432 E-EKEEKVY---EDLIDKRNSNFADAIG--APKIPNVRWEDVGGLEETKQTVLESIRTNL 485
Query: 521 QQARATEASGLVSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQI 580
+RA + SG++ L G P GKT +A +A F+ V PE + + ++ +
Sbjct: 486 FGSRALKRSGII---LYGSPGCGKTLIAKAVATEFKIAFLSVKGPELLNKYVGQSE-ENL 541
Query: 581 RKVREKYK 588
RKV E+ K
Sbjct: 542 RKVFERAK 549
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 122 bits (294), Expect = 1e-27
Identities = 75/209 (35%), Positives = 123/209 (58%), Gaps = 17/209 (8%)
Query: 250 GILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEK 309
GI+LYG PG GKTL+A+ + V GP++L+KYVG+SE N+R++F A++
Sbjct: 495 GIILYGSPGCGKTLIAKAVATEFKIAFLS-VKGPELLNKYVGQSEENLRKVFERAKQASP 553
Query: 310 RCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGV--DQLNNILVIGM 367
C +I FDEID++ RG G + GV D +V+QLL+++D + L + V+G
Sbjct: 554 -C-------VIFFDEIDSLAPNRGRNGDSGGVIDRIVSQLLAELDKLHNSPLTKVFVMGA 605
Query: 368 TNRRDMIDEALLRPGRLEVQMEIGL-PDEKGRVQILNIHTKRMREYKKIAEDVDSMELAT 426
TNR D++D +L+ PGR + +E+ D + + +IL +++MR EDVD E+A+
Sbjct: 606 TNRPDLLDNSLMTPGRFDKLVEVKPGEDVESKTKILEAVSRKMR----FEEDVDLREIAS 661
Query: 427 -LTKNFSGAELEGLVRAAQSTAMNRLIKA 454
+ + SGA+L ++ A A+ I++
Sbjct: 662 KVDEKMSGAQLFSIISNAGMAAIVETIQS 690
Score = 32.3 bits (70), Expect = 1.5
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 14/188 (7%)
Query: 405 HTKRMREYKKIAEDVDSMELATLTKNFSGAELEGLVRAAQS----TAMNRLIKASSKVEV 460
+ K + Y AE +D + T + + +L V S + +L+K KV++
Sbjct: 372 NVKNLALYTFSAEFMDENDRKTWLQYYLNEKLANHVAKKTSGFTLAELEKLVKNGKKVKI 431
Query: 461 DPEAMEKLMVERTDFLHALENDIKPAFGTSAEALEHFLARGIVNWGSPVSSIFEDGQLYI 520
+ E EK+ D + ++ A G A + + + ++ E + +
Sbjct: 432 E-EKEEKVY---EDLIDKRNSNFADAIG--APKIPNVRWEDVGGLEETKQTVLESIRTNL 485
Query: 521 QQARATEASGLVSVLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQI 580
+RA + SG++ L G P GKT +A +A F+ V PE + + ++ +
Sbjct: 486 FGSRALKRSGII---LYGSPGCGKTLIAKAVATEFKIAFLSVKGPELLNKYVGQSE-ENL 541
Query: 581 RKVREKYK 588
RKV E+ K
Sbjct: 542 RKVFERAK 549
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 118 bits (283), Expect = 2e-26
Identities = 108/396 (27%), Positives = 192/396 (48%), Gaps = 44/396 (11%)
Query: 92 LEADFMMKKTTSTD-PYDSEQMARDFLIQFANQVFTVGQQLAFLFQEKKVLSLIVKN--- 147
LE +F+ ++T+ P ++ L+Q T ++ LF ++K ++V+
Sbjct: 62 LEKEFITRQTSRHGRPLAVQKRREQQLVQSLRGTPTTLARVHELFDDEKHAVVVVEGSRR 121
Query: 148 ------LEAVDVVALAAGANAVPRRVRMGRLLPDASVQF--DKAENSSLNLIGKAKGKQP 199
L VD L A + + M + +P A V DK ++ N +G K P
Sbjct: 122 EWYVPILSIVDKDLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDS---NAMGHKVEKTP 178
Query: 200 RQSIINPDWDFGKMGIGGLDNEFNAIFRRAFASRVFPPEVVEQLGCKHVKGILLYGPPGT 259
+++ + IGG +++ + + + + PE E++G KG++LYG PGT
Sbjct: 179 KETFDD---------IGGCESQIQEL-KESVELPLTHPEYYEEMGITAPKGVILYGEPGT 228
Query: 260 GKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANSGLHI 319
GKTL+A+ + +A + G ++ K GE +R++F A+E+ I
Sbjct: 229 GKTLLAKAVANSTSATFIR-ATGSDLVQKQSGEGARLVRQIFQMAKEQAPS--------I 279
Query: 320 IIFDEIDAICKAR--GSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEA 377
+ DEIDA+ R S G V T++ +LL+++DG + ++ +I TNR D +D A
Sbjct: 280 VFIDEIDAVGTKRFDTSSRGEQEVQRTLL-ELLNQLDGFESRGDVKIIMATNRIDSLDPA 338
Query: 378 LLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIA-EDVDSMELATLTKNFSGAEL 436
L+RPGR++ ++E+ PDEK R +I IHT M K + E+V E K+ SGAE+
Sbjct: 339 LIRPGRIDRKIELPKPDEKTRQKIFTIHTSGMTIQKAVTYENVLGKE-----KSISGAEI 393
Query: 437 EGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVER 472
+ + A A+ K + + +A++ +M+ +
Sbjct: 394 KAVCTEAGMLALRAQRKCVGTDDFE-KAVKSVMLSK 428
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 116 bits (278), Expect = 1e-25
Identities = 80/221 (36%), Positives = 120/221 (54%), Gaps = 17/221 (7%)
Query: 237 PEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEA 295
PE +LG + KG+LL GPPGTGKTL+AR I A+ P G + + VG+
Sbjct: 223 PEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAG--EAQVPFFHTAGSEFDEVLVGQGAR 280
Query: 296 NIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDG 355
+R LF D + C II DEID++ R S + + T+ NQLLS++DG
Sbjct: 281 RVRDLF-DKAKARAPC-------IIFIDEIDSVGSKRVSNSIHPYANQTI-NQLLSEMDG 331
Query: 356 VDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKI 415
+ I+VI TNR D +D+ALLRPGR +V++ + PD GRV I N + ++
Sbjct: 332 FTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIVH---- 387
Query: 416 AEDVDSMELATLTKNFSGAELEGLV-RAAQSTAMNRLIKAS 455
+ +D LA + F+GA++E +V +AA A + ++ +
Sbjct: 388 SGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVEVT 428
Score = 33.1 bits (72), Expect = 0.88
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 534 VLLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYKTHGAK 593
VLL GPP +GKT LA +A + PF E F E R+VR+ + A+
Sbjct: 237 VLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSE----FDEVLVGQGARRVRDLFDKAKAR 292
Query: 594 LTECAPC 600
APC
Sbjct: 293 ----APC 295
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 109 bits (263), Expect = 6e-24
Identities = 79/231 (34%), Positives = 119/231 (51%), Gaps = 25/231 (10%)
Query: 228 RAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQIL 286
R F + P +LG K +G LL GPPG GKTL+A+ + + P I +NG + +
Sbjct: 298 REFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAA--ESTVPFISMNGSEFV 355
Query: 287 DKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-------GSVGGNT 339
+ G + IR LF +A C II DEIDAI + R G GG +
Sbjct: 356 EVIGGLGASRIRGLFKEARSRAP-C-------IIYIDEIDAIGRKRSEGAGAGGGFGGGS 407
Query: 340 GVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRV 399
G + +NQLL ++DG+ N ++V+ TNR D++D+ALLRPGR + + I LP R
Sbjct: 408 GEEEQTLNQLLVEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERK 467
Query: 400 QILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAEL-----EGLVRAAQS 445
+ ++ ++++ A S LA LT F+GA++ E +RAA +
Sbjct: 468 DMFELYMRKIK--LDHAPQEYSQRLAALTPGFTGADIMNVCNESAIRAASN 516
Score = 33.9 bits (74), Expect = 0.50
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYKTHGAKL 594
LL GPP GKT LA LA S PF+ + E F E L ++R +K ++
Sbjct: 322 LLTGPPGCGKTLLAKALAAESTVPFISMNGSE----FVEVIGGLGASRIRGLFKEARSR- 376
Query: 595 TECAPC 600
APC
Sbjct: 377 ---APC 379
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 109 bits (263), Expect = 6e-24
Identities = 79/231 (34%), Positives = 119/231 (51%), Gaps = 25/231 (10%)
Query: 228 RAFASRVFPPEVVEQLGCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQIL 286
R F + P +LG K +G LL GPPG GKTL+A+ + + P I +NG + +
Sbjct: 298 REFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAA--ESTVPFISMNGSEFV 355
Query: 287 DKYVGESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAICKAR-------GSVGGNT 339
+ G + IR LF +A C II DEIDAI + R G GG +
Sbjct: 356 EVIGGLGASRIRGLFKEARSRAP-C-------IIYIDEIDAIGRKRSEGAGAGGGFGGGS 407
Query: 340 GVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRV 399
G + +NQLL ++DG+ N ++V+ TNR D++D+ALLRPGR + + I LP R
Sbjct: 408 GEEEQTLNQLLVEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERK 467
Query: 400 QILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAEL-----EGLVRAAQS 445
+ ++ ++++ A S LA LT F+GA++ E +RAA +
Sbjct: 468 DMFELYMRKIK--LDHAPQEYSQRLAALTPGFTGADIMNVCNESAIRAASN 516
Score = 33.9 bits (74), Expect = 0.50
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 535 LLEGPPNSGKTALAAQLAKLSDFPFVKVCSPEDMVGFTETAKCLQIRKVREKYKTHGAKL 594
LL GPP GKT LA LA S PF+ + E F E L ++R +K ++
Sbjct: 322 LLTGPPGCGKTLLAKALAAESTVPFISMNGSE----FVEVIGGLGASRIRGLFKEARSR- 376
Query: 595 TECAPC 600
APC
Sbjct: 377 ---APC 379
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 88.2 bits (209), Expect = 2e-17
Identities = 79/243 (32%), Positives = 120/243 (49%), Gaps = 24/243 (9%)
Query: 248 VKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEE 307
VKGILL+GPPG GKTL+A+ + I + + K+VG+SE IR LF A
Sbjct: 211 VKGILLFGPPGNGKTLLAKAVAGESKQMFFNI-SASSLTSKWVGDSEKTIRGLFQIAR-- 267
Query: 308 EKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQL--NNILVI 365
N+ II DEID+I R + V + + L + DG + ILVI
Sbjct: 268 ------NAQPSIIFIDEIDSILCERSE--KDAEVSRRMKTEFLVQFDGATSSADDRILVI 319
Query: 366 GMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELA 425
G TNR +D+A+LR R ++ + LPDE+ R +++ TK ++++ + + + S ++
Sbjct: 320 GATNRPHELDDAVLR--RFPKRIMLNLPDEEARKELI---TKTLKKH-NMMDGLISSDIR 373
Query: 426 TLTKNFSGAELEGLVRAAQSTAM--NRLIKASSKVEVDPEAMEKLMVERTDFLHALENDI 483
+ N SG LV + AM R I S D E + K + +DF AL I
Sbjct: 374 YIASNTSGFSNSDLVALCKEAAMVPIREIDRSKLSMTDGEKIRK--IRASDFDTALRT-I 430
Query: 484 KPA 486
+P+
Sbjct: 431 RPS 433
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 85.4 bits (202), Expect = 2e-16
Identities = 72/248 (29%), Positives = 123/248 (49%), Gaps = 24/248 (9%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
+GILLYGPPG GKTL+A+ + + R + + DK+ GES+ +F+ A++ +
Sbjct: 115 RGILLYGPPGCGKTLLAKAVARAAGCRFINL-QVSNLTDKWYGESQKLAAAVFSVAQKFQ 173
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQL-NNILVIGM 367
II DEID+ + R S + + Q ++ DG + I+V+G
Sbjct: 174 PT--------IIFIDEIDSFLRDRQSHDHESTA--MMKAQFMTLWDGFSSSGDQIIVMGA 223
Query: 368 TNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATL 427
TNR +D A+LR R+ + ++ +P+ K R QILN+ + +KI V+ E+A
Sbjct: 224 TNRPRDVDAAILR--RMTARFQVPVPNAKQRSQILNVILRN----EKINNTVNLGEIAQA 277
Query: 428 TKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVERTDFLHALENDIKPAF 487
+ SG++L+ + R A L +A + V + L +E++DF A+ ++ A
Sbjct: 278 AEGLSGSDLKEVCRLA------LLARAKATVASGGSVNQLLPLEQSDFESAVHKYMRAAH 331
Query: 488 GTSAEALE 495
E L+
Sbjct: 332 LLVEETLD 339
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 85.4 bits (202), Expect = 2e-16
Identities = 72/248 (29%), Positives = 123/248 (49%), Gaps = 24/248 (9%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
+GILLYGPPG GKTL+A+ + + R + + DK+ GES+ +F+ A++ +
Sbjct: 118 RGILLYGPPGCGKTLLAKAVARAAGCRFINL-QVSNLTDKWYGESQKLAAAVFSVAQKFQ 176
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQL-NNILVIGM 367
II DEID+ + R S + + Q ++ DG + I+V+G
Sbjct: 177 PT--------IIFIDEIDSFLRDRQSHDHESTA--MMKAQFMTLWDGFSSSGDQIIVMGA 226
Query: 368 TNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATL 427
TNR +D A+LR R+ + ++ +P+ K R QILN+ + +KI V+ E+A
Sbjct: 227 TNRPRDVDAAILR--RMTARFQVPVPNAKQRSQILNVILRN----EKINNTVNLGEIAQA 280
Query: 428 TKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVERTDFLHALENDIKPAF 487
+ SG++L+ + R A L +A + V + L +E++DF A+ ++ A
Sbjct: 281 AEGLSGSDLKEVCRLA------LLARAKATVASGGSVNQLLPLEQSDFESAVHKYMRAAH 334
Query: 488 GTSAEALE 495
E L+
Sbjct: 335 LLVEETLD 342
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Hypothetical
protein Y34D9A.10 protein.
Length = 430
Score = 85.0 bits (201), Expect = 2e-16
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
+GILL+GPPGTGK+ +A+ + ++ ++ K++GESE ++ LFA A E +
Sbjct: 152 QGILLFGPPGTGKSYIAKAVATEAGESTFFSISSSDLMSKWLGESEKLVKNLFALAREHK 211
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNN--ILVIG 366
II DEID++C AR + + + + ++ GV LNN ILV+G
Sbjct: 212 P--------SIIFIDEIDSLCSARSDNESESA--RRIKTEFMVQMQGVG-LNNDGILVLG 260
Query: 367 MTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELAT 426
TN ++D A+ R R E ++ I LPD R ++ I + Y + D D LA
Sbjct: 261 ATNIPWILDSAIRR--RFEKRIYIPLPDIHARKEMFRIDVG--KNYNTLT-DQDFKVLAE 315
Query: 427 LTKNFSGAELEGLVRAAQSTAMNRLIKAS 455
+ +SG ++ LV+ A + R+ A+
Sbjct: 316 RCEGYSGYDISILVKDALMQPVRRVQSAT 344
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 81.0 bits (191), Expect = 3e-15
Identities = 82/249 (32%), Positives = 122/249 (48%), Gaps = 29/249 (11%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
K ++L GPPGTGKTL+AR I ++ V+ + K+ G+SE +R LF E
Sbjct: 227 KAMVLAGPPGTGKTLIARAIASE-SSSTFFTVSSTDLSSKWRGDSEKIVRLLF-----EL 280
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDT---VVNQLLSKIDGVD---QLNNI 362
R A S II DEID + G GN+G H+ V ++ L ++DG +
Sbjct: 281 ARFYAPS---IIFIDEIDTL----GGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRV 333
Query: 363 LVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSM 422
V+ TN +DEAL R R E ++ I LPD R +++ K M K +++++
Sbjct: 334 FVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIE---KSMEGTPK-SDEINYD 387
Query: 423 ELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKL---MVERTDFLHAL 479
+LA T+ FSGA++ L R A + R S + AME L +V DF AL
Sbjct: 388 DLAARTEGFSGADVVSLCRTAAINVLRRYDTKSLRGGELTAAMESLKAELVRNIDFEAAL 447
Query: 480 ENDIKPAFG 488
+ + P+ G
Sbjct: 448 Q-AVSPSAG 455
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 81.0 bits (191), Expect = 3e-15
Identities = 82/249 (32%), Positives = 122/249 (48%), Gaps = 29/249 (11%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
K ++L GPPGTGKTL+AR I ++ V+ + K+ G+SE +R LF E
Sbjct: 227 KAMVLAGPPGTGKTLIARAIASE-SSSTFFTVSSTDLSSKWRGDSEKIVRLLF-----EL 280
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDT---VVNQLLSKIDGVD---QLNNI 362
R A S II DEID + G GN+G H+ V ++ L ++DG +
Sbjct: 281 ARFYAPS---IIFIDEIDTL----GGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRV 333
Query: 363 LVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSM 422
V+ TN +DEAL R R E ++ I LPD R +++ K M K +++++
Sbjct: 334 FVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIE---KSMEGTPK-SDEINYD 387
Query: 423 ELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKL---MVERTDFLHAL 479
+LA T+ FSGA++ L R A + R S + AME L +V DF AL
Sbjct: 388 DLAARTEGFSGADVVSLCRTAAINVLRRYDTKSLRGGELTAAMESLKAELVRNIDFEAAL 447
Query: 480 ENDIKPAFG 488
+ + P+ G
Sbjct: 448 Q-AVSPSAG 455
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 80.6 bits (190), Expect = 4e-15
Identities = 83/252 (32%), Positives = 124/252 (49%), Gaps = 32/252 (12%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
K ++L GPPGTGKTL+AR I ++ V+ + K+ G+SE +R LF E
Sbjct: 227 KAMVLAGPPGTGKTLIARAIASE-SSSTFFTVSSTDLSSKWRGDSEKIVRLLF-----EL 280
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDT---VVNQLLSKIDGVD---QLNNI 362
R A S II DEID + G GN+G H+ V ++ L ++DG +
Sbjct: 281 ARFYAPS---IIFIDEIDTL----GGQRGNSGEHEASRRVKSEFLVQMDGSQNKFDSRRV 333
Query: 363 LVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSM 422
V+ TN +DEAL R R E ++ I LPD R +++ K M K +++++
Sbjct: 334 FVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIE---KSMEGTPK-SDEINYD 387
Query: 423 ELATLTKNFSGAELEGLVRAAQSTAMNRLIKASSKVEVDPE---AMEKL---MVERTDFL 476
+LA T+ FSGA++ L R A + R + +K E AME L +V DF
Sbjct: 388 DLAARTEGFSGADVVSLCRTAAINVLRRYFRYDTKSLRGGELTAAMESLKAELVRNIDFE 447
Query: 477 HALENDIKPAFG 488
AL+ + P+ G
Sbjct: 448 AALQ-AVSPSAG 458
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 76.2 bits (179), Expect = 1e-13
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
KG+LL+GPPGTGKT++ R + A I + + K+VGE E +R LF+ A
Sbjct: 350 KGVLLFGPPGTGKTMIGRCVASQCKATFFNI-SASSLTSKWVGEGEKLVRALFSVA---- 404
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQL--NNILVIG 366
R S +I DEID++ +R + + + L ++DGV+ +LV+G
Sbjct: 405 -RLKLPS---VIFIDEIDSLLSSRSESEHESS--RRIKTEFLVQLDGVNTAPDERLLVLG 458
Query: 367 MTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQILNIHTKRMREYKKIAEDVDSMELAT 426
TNR +DEA R R + ++ I LP+ + R QI+ + + + + +
Sbjct: 459 ATNRPQELDEAARR--RFQKRLYIALPEPESRTQIVQ---NLLVGTRHDITNHNLERIRE 513
Query: 427 LTKNFSGAELEGLVRAA 443
LT +SGA++ L A
Sbjct: 514 LTDGYSGADMRQLCTEA 530
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 65.7 bits (153), Expect = 1e-10
Identities = 44/164 (26%), Positives = 86/164 (52%), Gaps = 19/164 (11%)
Query: 251 ILLYGPPGTGKTLMARQIGKMLNAR-EPKI-------VNGPQILDKYVGESEANIRRLFA 302
ILL GPPGTGKT + + + + L+ R K +N + K+ ES ++++F
Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFD 234
Query: 303 DAEE--EEKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTV--VNQLLSKIDGVDQ 358
+E E+++C + ++ DE++++ R S + D + VN LL++ID + +
Sbjct: 235 QIDELAEDEKC-----MVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRR 289
Query: 359 LNNILVIGMTNRRDMIDEALLRPGRLEVQMEIGLPDEKGRVQIL 402
+N+L++ +N +D+AL+ R ++ +G P + R +L
Sbjct: 290 RDNVLILCTSNLESTLDKALV--DRADIVKNVGQPSDFARYSML 331
>AC132211-4|AAN01432.2| 238|Caenorhabditis elegans Hypothetical
protein Y108F1.1 protein.
Length = 238
Score = 63.3 bits (147), Expect = 7e-10
Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 8/119 (6%)
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNN-ILVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
G + G +G + +NQLL ++D + N ++V+ TNR D++D+ALLRPGR + + I
Sbjct: 46 GLLLGGSGEEEQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISID 105
Query: 392 LPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAEL-----EGLVRAAQS 445
LP R + ++ ++++ A S LA LT +F+GA++ E +RAA +
Sbjct: 106 LPTVLERKDMFELYMRKIK--LDHAPQEYSQRLAVLTPSFTGADIMNVCNESAIRAASN 162
>AC024789-1|AAK85500.1| 238|Caenorhabditis elegans Hypothetical
protein Y47C4A.1 protein.
Length = 238
Score = 63.3 bits (147), Expect = 7e-10
Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 8/119 (6%)
Query: 333 GSVGGNTGVHDTVVNQLLSKIDGVDQLNN-ILVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
G + G +G + +NQLL ++D + N ++V+ TNR D++D+ALLRPGR + + I
Sbjct: 46 GLLLGGSGEEEQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISID 105
Query: 392 LPDEKGRVQILNIHTKRMREYKKIAEDVDSMELATLTKNFSGAEL-----EGLVRAAQS 445
LP R + ++ ++++ A S LA LT +F+GA++ E +RAA +
Sbjct: 106 LPTVLERKDMFELYMRKIK--LDHAPQEYSQRLAVLTPSFTGADIMNVCNESAIRAASN 162
>Z48583-3|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 44.8 bits (101), Expect = 3e-04
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFADAEEEE 308
+ ++ YGPPGTGKTL A+ + + + + ++ G I + + I ++F A +
Sbjct: 343 RNVMFYGPPGTGKTLFAKSLAQH-SGLDYAVLTGGDIA-PLGRDGVSAIHKVFDWASKSR 400
Query: 309 KRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMT 368
K GL I+ DE DA + R G + +N L + +Q +++ +
Sbjct: 401 K------GL-IVFIDEADAFLQKRSKNGMSEDTR-AALNAFLFRTG--EQSRKFMLVVAS 450
Query: 369 NRRDMIDEALLRPGRLEVQMEIGLP--DEKGRV--QILNIH-----TKRMREYKKIAEDV 419
N+ + D A+ R + +E LP +E+ R+ Q N H T R + ++
Sbjct: 451 NQPEQFDWAV--NDRFDQLVEFTLPGMEERERILLQYFNEHIVTPATSGSRSQRLKLDNF 508
Query: 420 DSM----ELATLTKNFSGAELEGLVRAAQSTA 447
D + E+A T SG EL LV Q++A
Sbjct: 509 DWVAKCNEVAKKTSGMSGRELSKLVIGWQASA 540
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 41.1 bits (92), Expect = 0.003
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 20/152 (13%)
Query: 244 GCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFAD 303
G + +G L YGPPGTGK+ + + + LD + + L
Sbjct: 193 GVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSERTLD------DDRLNHLLNT 246
Query: 304 AEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGN----TGVHDTVVNQLLSKIDGVDQL 359
A NS ++I ++IDA +R N G+ + LL+ +DGV
Sbjct: 247 APP-------NS---VVILEDIDAAFVSREDPMSNHPAYQGLSRVTFSGLLNALDGVACA 296
Query: 360 NNILVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
L TN + +D AL+RPGR++ + G
Sbjct: 297 EERLTFMTTNYVERLDPALIRPGRVDRKQYFG 328
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 41.1 bits (92), Expect = 0.003
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 20/152 (13%)
Query: 244 GCKHVKGILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESEANIRRLFAD 303
G + +G L YGPPGTGK+ + + + LD + + L
Sbjct: 239 GVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSERTLD------DDRLNHLLNT 292
Query: 304 AEEEEKRCGANSGLHIIIFDEIDAICKARGSVGGN----TGVHDTVVNQLLSKIDGVDQL 359
A NS ++I ++IDA +R N G+ + LL+ +DGV
Sbjct: 293 APP-------NS---VVILEDIDAAFVSREDPMSNHPAYQGLSRVTFSGLLNALDGVACA 342
Query: 360 NNILVIGMTNRRDMIDEALLRPGRLEVQMEIG 391
L TN + +D AL+RPGR++ + G
Sbjct: 343 EERLTFMTTNYVERLDPALIRPGRVDRKQYFG 374
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 36.3 bits (80), Expect = 0.094
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 257 PGTGKTLMARQIGKMLNAR-EPKIVNGPQILDKYVGESEANIRRLFADAEEEEKRCGANS 315
P K L+ + + + +A EPK+ + + G+ E +LFA+ EEE+ A
Sbjct: 649 PEERKNLVLKLLSALFDAEDEPKLEHFESLKSHLNGDFEQFFEKLFANMEEED----AER 704
Query: 316 GLHIII-FDEIDAICKA--RGSVGGNTGVHDTVVNQLLSKIDGVDQLNNILVIGMTNRRD 372
L I FD++ C A RG + G + +++ K+ ++ + V+ ++
Sbjct: 705 VLEIAARFDKLVGFCDADSRGEIAGKMILGRREFDEMSEKLHFLE----LDVLTVSQHTT 760
Query: 373 MIDEALLRP-GRLEVQMEIGLPDEKGRVQILNI 404
+I +AL RP LE + + E GR+ + ++
Sbjct: 761 IITDALSRPIEHLEEKEATKMVKELGRLALFSV 793
>U80026-1|AAC25844.1| 355|Caenorhabditis elegans Fucosyl
transferase protein 2 protein.
Length = 355
Score = 33.1 bits (72), Expect = 0.88
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 9 DELAITNCALIHQDDFPSDIKHIEVSTGPSQHFVFSIRFYNGVDRGTVGFSAPQRKWATL 68
DEL NC I + D+ +D H E S S + +I + + + G V + KW
Sbjct: 200 DELRFKNCVHIRRGDYVNDFDHAETS---SYFTIRAIDYVHTLHPGLVYLISDDPKWVRK 256
Query: 69 SIGQTID 75
I + +D
Sbjct: 257 QIAEHLD 263
>U42848-7|AAA83612.2| 567|Caenorhabditis elegans Hypothetical
protein C31H1.8 protein.
Length = 567
Score = 33.1 bits (72), Expect = 0.88
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 806 TRSYDSDSSLKPETPRLLEYIDSNSDSSDTETCDLDS 842
T+S S S +P +P EY +S ++D+ET D +S
Sbjct: 505 TQSVGSSESSEPRSPEFTEYSESEDTAADSETSDSES 541
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 32.3 bits (70), Expect = 1.5
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 251 ILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGES-EANIRRLFADAEEEEK 309
+LL GP G GKT + + + ++L+ YVGE E+ I++L A +
Sbjct: 144 VLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQKLVQAAGGNVE 203
Query: 310 RCGANSGLHIIIFDEIDAICKA 331
+ A G I+ DE+D I A
Sbjct: 204 K--AQQG--IVFLDEVDKIAAA 221
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 32.3 bits (70), Expect = 1.5
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 251 ILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGES-EANIRRLFADAEEEEK 309
+LL GP G GKT + + + ++L+ YVGE E+ I++L A +
Sbjct: 260 VLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQKLVQAAGGNVE 319
Query: 310 RCGANSGLHIIIFDEIDAICKA 331
+ A G I+ DE+D I A
Sbjct: 320 K--AQQG--IVFLDEVDKIAAA 337
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 32.3 bits (70), Expect = 1.5
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 251 ILLYGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESE--ANIR---RLFADAE 305
+L YGPPGTGKT A + L PK + ++LD + A +R + F+ +
Sbjct: 51 LLFYGPPGTGKTSAALAFCRQL---FPKNIFHDRVLDLNASDERGIAVVRQKIQSFSKSS 107
Query: 306 EEEKRCGANSGLHIIIFDEIDAICK 330
L III DE+DA+ +
Sbjct: 108 LGHSHREDVLKLKIIILDEVDAMTR 132
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 32.3 bits (70), Expect = 1.5
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 239 VVEQLG-CK---HVKGILLY--GPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVG 291
V+E L CK VKG++L GPPG GKT +A+ I + + + ++ + G + G
Sbjct: 314 VLEHLAVCKMNNSVKGMILCFTGPPGIGKTSIAKAIAESMGRKFQRVSLGGIRDESDIRG 373
Query: 292 ESEANIRRLFADAEEEEKRCGANSGLHIIIFDEIDAI 328
+ + E K C N+ + + DE+D +
Sbjct: 374 HRRTYVAAMPGRIIEALKTCKTNN--PVFLLDEVDKL 408
>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical protein
ZC434.5 protein.
Length = 1149
Score = 31.5 bits (68), Expect = 2.7
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 433 GAELEGLVRAAQSTAMNRLIKASSKVEVDPEAMEKLMVERTDFLHALENDIKPAFGTSAE 492
GA++ G + A Q + L SK + +A+ KL+ + ++ +D KP +A
Sbjct: 942 GADIAGQIEA-QGVLVRDLKNKDSKSQETKDAIAKLLELKKNYKEVTGSDYKPGPAPAAA 1000
Query: 493 ALEHFLARGIVNWGSPVSSIFEDGQLYIQQARATEA 528
+ + V+ G +S +D L +++ + +A
Sbjct: 1001 PAKVTVPAPSVSGGDTLSKQIDDQALLVRELKMKDA 1036
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 31.5 bits (68), Expect = 2.7
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 249 KGILLYGPPGTGKTLMA----RQIGKMLNAREPKIVNGPQILDKYVGESEAN--IRRLFA 302
K LL G PG GKT A +Q+G L V + L+ +GE + I + F
Sbjct: 341 KAALLSGSPGVGKTTCAYMACQQLGLQLVEMNASDVRSKKHLEAKIGELSGSHQIEQFFG 400
Query: 303 DAEEEEKRCGANSGL---HIIIFDEIDAI 328
K+C HI+I DE+D +
Sbjct: 401 -----AKKCAPQDNQKVHHILIMDEVDGM 424
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 31.1 bits (67), Expect = 3.5
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 786 EDALLSNSFDVINLEELPAATRSYDSDSSLKPETPRLLEYIDSNSDSSDTETCDLDSRT 844
E ALL+ + V L L + TRS DSS + +T + L ++ + DS++T TC RT
Sbjct: 135 EHALLAQTLGVKQLVSLRSPTRS--PDSSRRSDTIQRLFHLSQSPDSTET-TCLRSPRT 190
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 31.1 bits (67), Expect = 3.5
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 11/113 (9%)
Query: 249 KGILLYGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESEANIRRLFADAEEE 307
K + +GPPG GKT +A+ I LN + V G + + G + + +
Sbjct: 506 KILCFHGPPGVGKTSIAKSIATALNREYFRFSVGGMTDVAEIKGHRRTYVGAMPGKMIQC 565
Query: 308 EKRCGANSGLHIIIFDEIDAICKARGSVGGNTGVHDTVVNQLLSKIDGVDQLN 360
K+ + L ++ DE+D I G G H + LL +D N
Sbjct: 566 MKKVKTENPL--VLIDEVDKI--------GGAGFHGDPASALLELLDPEQNAN 608
>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical
protein ZK1067.2 protein.
Length = 2219
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 535 LLEGPPNSGKTALAAQLAK--LSDFPFVKVCSPEDMVGFTET 574
L++GPP +GKT + Q+ K L + + K+ P +V FT +
Sbjct: 827 LIQGPPGTGKTHIGVQIVKTILQNRSYWKITEPILVVCFTNS 868
Score = 30.3 bits (65), Expect = 6.2
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 252 LLYGPPGTGKTLMARQIGK-MLNAREPKIVNGPQILDKYVGESEAN-IRRLFADAEEEEK 309
L+ GPPGTGKT + QI K +L R + P ++ + N + R++ E +E+
Sbjct: 827 LIQGPPGTGKTHIGVQIVKTILQNRSYWKITEPILVVCFTNSGLDNLLERIYQMIENDEE 886
Query: 310 RCGANSGLHIIIF 322
N II F
Sbjct: 887 LSKDNGRPKIIRF 899
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 30.3 bits (65), Expect = 6.2
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 533 SVLLEGPPNSGKTALA-AQLAKLSD-FPFVKVCSPE 566
+VL+ GPP +GKTA+A A +L D PFV + + E
Sbjct: 84 AVLIAGPPATGKTAIALAMSQELGDGVPFVPLVASE 119
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 30.3 bits (65), Expect = 6.2
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 737 HATLLVRTENVTSRTDN--LAMSP-SFSEMADSGRYTEEASSSHIDIVAMSYEDA--LLS 791
HA L+ T+N + +N +P + +E AD E+ +S D ++ + +A L+
Sbjct: 432 HAELVQSTKNAQNLAENGEEPENPEALAENADENPENLESQASQADFLSNTDGNAQNLVE 491
Query: 792 NSFDVINLEELPAATRSYDSDSSLKPETPRLLEYIDSNSDSSDTETCD 839
N L E T S+++ K E P L ID NS++ D +
Sbjct: 492 NPEISDFLVENQEETEEKVSEAAEKAENPMKLAEIDENSENLDISAAE 539
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.133 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,696,242
Number of Sequences: 27539
Number of extensions: 879407
Number of successful extensions: 2537
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2299
Number of HSP's gapped (non-prelim): 129
length of query: 878
length of database: 12,573,161
effective HSP length: 88
effective length of query: 790
effective length of database: 10,149,729
effective search space: 8018285910
effective search space used: 8018285910
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)
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