Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000446-TA|BGIBMGA000446-PA|undefined
         (516 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    24   2.6  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   6.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   6.1  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   8.0  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 14/87 (16%)

Query: 153 DNIRKYVEECDSMQGFQINFDCTDGFAGLALGCIEHLSDEYTKPILAY--------PIIA 204
           DN  +Y E   + + F ++    DG  G+AL  + +  + Y  P+ ++        P + 
Sbjct: 233 DNDLRYSELAVAGESFTVH----DGIFGMALSPVTN--NLYYSPLTSHSLYYVNMEPFMK 286

Query: 205 SHFPDNNSNTQEERDISNLRDSIRLVN 231
           S + +NN   +  +DI N + S ++++
Sbjct: 287 SQYEENNIEYEGIQDIFNTQSSAKVMS 313


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 124 DYNLEENEAFDIYPTGRGVWKSD 146
           D  L+   A   +PTGRG++ +D
Sbjct: 175 DRFLQAANAXRFWPTGRGIYHND 197


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)

Query: 172 FDCTDGFAGLALGCIEH 188
           FD  DG  GLALG I +
Sbjct: 242 FDLMDGILGLALGPIRN 258


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 124 DYNLEENEAFDIYPTGRGVWKSD 146
           D  L+   A   +PTGRG++ +D
Sbjct: 191 DRFLQAANACRFWPTGRGIYHND 213


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.134    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,246
Number of Sequences: 429
Number of extensions: 7774
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 4
length of query: 516
length of database: 140,377
effective HSP length: 61
effective length of query: 455
effective length of database: 114,208
effective search space: 51964640
effective search space used: 51964640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)