Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000446-TA|BGIBMGA000446-PA|undefined
(516 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 36 0.091
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 36 0.091
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 34 0.28
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 33 0.48
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 33 0.48
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 33 0.64
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 32 0.84
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 32 1.1
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 32 1.1
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 32 1.1
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 31 1.9
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 31 1.9
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 31 1.9
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 31 1.9
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 31 1.9
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 31 1.9
Z78200-10|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 31 2.6
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 31 2.6
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 30 3.4
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 30 3.4
Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical pr... 30 4.5
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 5.9
AF016685-1|AAG24144.2| 300|Caenorhabditis elegans Hypothetical ... 29 5.9
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 29 7.9
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 29 7.9
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 29 7.9
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 29 7.9
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 29 7.9
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 29 7.9
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 7.9
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 7.9
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 29 7.9
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 35.5 bits (78), Expect = 0.091
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 129 ENEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQI--NFDCTDGFAGLALGCI 186
+ +A + Y GR + D+ D +++ E C+ +QGF I +F G L+L +
Sbjct: 102 KEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSL-LM 160
Query: 187 EHLSDEY-TKPILAYPI 202
E LS EY KP L + I
Sbjct: 161 ERLSTEYGKKPKLEFAI 177
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 35.5 bits (78), Expect = 0.091
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 129 ENEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQI--NFDCTDGFAGLALGCI 186
+ +A + Y GR + D+ D +++ E C+ +QGF I +F G L+L +
Sbjct: 74 KEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSL-LM 132
Query: 187 EHLSDEY-TKPILAYPI 202
E LS EY KP L + I
Sbjct: 133 ERLSTEYGKKPKLEFAI 149
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 33.9 bits (74), Expect = 0.28
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 4 REILTLQFGHYSNYVGAHFWNI--QELSFDYSGT--ATTDL---NHDILYREGQTSRNEV 56
REI+ +Q G N +G+ FW + E GT TDL D+ Y E N
Sbjct: 2 REIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEA----NNG 57
Query: 57 TYTPRLLIADLKGALKTLPQSG 78
Y PR ++ DL+ +SG
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSG 79
Score = 32.3 bits (70), Expect = 0.84
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 153 DNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIEHLSDEYTKPILA 199
D IRK E CD +QGFQ+ G +G+ I + +EY I++
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMS 165
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 33.1 bits (72), Expect = 0.48
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 4 REILTLQFGHYSNYVGAHFWNI--QELSFDYSG--TATTDLNHD---ILYREGQTSRNEV 56
REI+ +Q G N +G+ FW + E D SG +DL + + Y E +++
Sbjct: 2 REIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNK--- 58
Query: 57 TYTPRLLIADLKGALKTLPQSG 78
Y PR ++ DL+ +SG
Sbjct: 59 -YVPRAVLVDLEPGTMDSVRSG 79
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 33.1 bits (72), Expect = 0.48
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 4 REILTLQFGHYSNYVGAHFWNI--QELSFDYSG--TATTDLNHD---ILYREGQTSRNEV 56
REI+ +Q G N +G+ FW + E D SG +DL + + Y E +++
Sbjct: 2 REIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNK--- 58
Query: 57 TYTPRLLIADLKGALKTLPQSG 78
Y PR ++ DL+ +SG
Sbjct: 59 -YVPRAVLVDLEPGTMDSVRSG 79
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 32.7 bits (71), Expect = 0.64
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 4 REILTLQFGHYSNYVGAHFWNIQELSFDYSGTATTDLNHDILYREGQTSRNEVT---YTP 60
REI+ +Q G N +GA FW + T + + D+ NE + Y P
Sbjct: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYVP 61
Query: 61 RLLIADLK 68
R + DL+
Sbjct: 62 RACLVDLE 69
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 153 DNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIEHLSDEYTKPIL 198
D +RK E CD +QGFQ+ G +G+ I + +EY I+
Sbjct: 118 DVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 32.3 bits (70), Expect = 0.84
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 4 REILTLQFGHYSNYVGAHFWNI--QELSFDYSGT--ATTDL---NHDILYREGQTSRNEV 56
REI+ +Q G N +G+ FW + E GT +DL D+ Y E N
Sbjct: 2 REIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEA----NNG 57
Query: 57 TYTPRLLIADLKGALKTLPQSG 78
Y PR ++ DL+ +SG
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSG 79
Score = 30.7 bits (66), Expect = 2.6
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 153 DNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIEHLSDEYTKPILA 199
D IRK E CD +QGFQ+ G +G+ I + +E+ I++
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMS 165
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 129 ENEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIE 187
+ +A + Y G + D+ D +R+ E C S+QGF I G +G +E
Sbjct: 96 KEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVME 155
Query: 188 HLSDEYTK 195
LS +Y K
Sbjct: 156 RLSIDYGK 163
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 4 REILTLQFGHYSNYVGAHFWNIQELSFDYSGTATTDLNHDILYREGQTSRNEVT---YTP 60
REI+ +Q G N +GA FW + T D+ NE Y P
Sbjct: 2 REIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYVP 61
Query: 61 RLLIADLKGALKTLPQSG 78
R ++ DL+ +SG
Sbjct: 62 RAVLVDLEPGTMDSVRSG 79
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 153 DNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIEHLSDEYTKPILA 199
D +RK E CD +QGFQ+ G +G+ I + +EY I++
Sbjct: 118 DVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMS 165
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 129 ENEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIE 187
+ +A + Y G + D+ D IRK E C+ +QGF + G +G + +E
Sbjct: 99 KEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLME 158
Query: 188 HLSDEYTK 195
LS E+ K
Sbjct: 159 RLSVEFGK 166
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 460 NGTFLANMIEKL-YR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 512
N T +A +L Y+ D+ + A +H + EG+E E+TE+ + LA + +YE+
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 460 NGTFLANMIEKL-YR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 512
N T +A +L Y+ D+ + A +H + EG+E E+TE+ + LA + +YE+
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 460 NGTFLANMIEKL-YR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 512
N T +A +L Y+ D+ + A +H + EG+E E+TE+ + LA + +YE+
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 129 ENEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIE 187
+ +A + Y G + D+ D +R+ VE C +QGF + G +G +E
Sbjct: 101 KEDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLME 160
Query: 188 HLSDEYTK 195
LS +Y K
Sbjct: 161 RLSVDYGK 168
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 460 NGTFLANMIEKL-YR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 512
N T +A +L Y+ D+ + A +H + EG+E E+TE+ + LA + +YE+
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 460 NGTFLANMIEKL-YR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 512
N T +A +L Y+ D+ + A +H + EG+E E+TE+ + LA + +YE+
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 460 NGTFLANMIEKL-YR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 512
N T +A +L Y+ D+ + A +H + EG+E E+TE+ + LA + +YE+
Sbjct: 378 NTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z78200-10|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 30.7 bits (66), Expect = 2.6
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Query: 4 REILTLQFGHYSNYVGAHFWN-IQE---LSFD--YSGTATTDLNHDILYREGQTSRNEVT 57
+EI+ +Q G N +GA FW I E L D Y G + L Y + R
Sbjct: 2 KEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRK--- 58
Query: 58 YTPRLLIADL 67
Y PR ++ DL
Sbjct: 59 YVPRAILVDL 68
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 30.7 bits (66), Expect = 2.6
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Query: 4 REILTLQFGHYSNYVGAHFWN-IQE---LSFD--YSGTATTDLNHDILYREGQTSRNEVT 57
+EI+ +Q G N +GA FW I E L D Y G + L Y + R
Sbjct: 2 KEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRK--- 58
Query: 58 YTPRLLIADL 67
Y PR ++ DL
Sbjct: 59 YVPRAILVDL 68
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 460 NGTFLANMIEKL-YR-DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 512
N T +A ++L Y+ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 375 NTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 129 ENEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIE 187
+ +A + Y G + D D IR+ C+ +QGF + G +G +E
Sbjct: 93 KEDAANNYARGHYTVGKEIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLME 152
Query: 188 HLSDEYTK 195
LS EY K
Sbjct: 153 RLSAEYGK 160
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 30.3 bits (65), Expect = 3.4
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 474 DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 512
D+ + A +H + EG+E E+TE+ + LA + +YE+
Sbjct: 31 DLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical
protein R07B1.3 protein.
Length = 536
Score = 29.9 bits (64), Expect = 4.5
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 417 EQPLNLKTPFPQIFTKNLNKYGFIKNDNRLEDVESCAVIAGYHNGTFLANMIEKLYRDVS 476
E PL L IF +N YG+ N + ++++ A ++GY+N I Y D +
Sbjct: 195 EDPL-LSVAHSGIFISLVNFYGYGSQLNYIPEMKTFAYLSGYNNSYDENYWINTGYNDFN 253
Query: 477 RIRFAK 482
++ F +
Sbjct: 254 KLGFVE 259
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.5 bits (63), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 68 KGALKTLPQ--SGGLSDDAQETDLQWDTVEKIEEPPPEKNQYLAAIDSVQTTVADGKKDY 125
K A K LP GL +E QW+ EK+++ EK + A + D D
Sbjct: 267 KEARKKLPAWILEGLEKAEREKQKQWEKEEKLKKAEEEKARRRA---EAGKSKFDSSSDE 323
Query: 126 NLEENEAFDIYPTGRGVWKSDYGDLFSDN 154
ENE F P G G KS+Y + +D+
Sbjct: 324 ESPENEKF---PVGNG--KSEYQEDDNDS 347
>AF016685-1|AAG24144.2| 300|Caenorhabditis elegans Hypothetical
protein F59E11.8 protein.
Length = 300
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 448 DVESC---AVIAGYHNGTFLANMIEKLYRDVSRIRFAKLHKFKEEGLEASEYTESLDKLA 504
D E C V+ YH G + ++K + I LH++ E +A+ Y+ L K+
Sbjct: 199 DEELCYILCVLCFYHIGNKIGGSMQKTTERLLNILADNLHEYYVEQKDATRYSYRLTKIL 258
Query: 505 EFKDNYE 511
+ Y+
Sbjct: 259 KISQQYK 265
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 129 ENEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIE 187
+ +A + Y G + DL D IR+ + C +QGF + G +G +E
Sbjct: 96 KEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLME 155
Query: 188 HLSDEYTK 195
LS +Y K
Sbjct: 156 RLSVDYGK 163
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 129 ENEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIE 187
+ +A + Y G + DL D IR+ + C +QGF + G +G +E
Sbjct: 95 KEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLME 154
Query: 188 HLSDEYTK 195
LS +Y K
Sbjct: 155 RLSVDYGK 162
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 443 DNRLEDVESCAVIAGYHNGTFLANMIEKLYRDV-SRIRFAKLHKFKEEGLEASEYTESL 500
D + E+V+ +IA ++N FL + E+LY DV SR F + ++ L + T +L
Sbjct: 1181 DGQHENVQR--LIAAFNNSNFLYLLSERLYEDVFSRFVFNDYYTEEQVALTMRQVTSAL 1237
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 129 ENEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIE 187
+ +A + Y G + DL D IR+ + C +QGF + G +G +E
Sbjct: 96 KEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLME 155
Query: 188 HLSDEYTK 195
LS +Y K
Sbjct: 156 RLSVDYGK 163
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 443 DNRLEDVESCAVIAGYHNGTFLANMIEKLYRDV-SRIRFAKLHKFKEEGLEASEYTESL 500
D + E+V+ +IA ++N FL + E+LY DV SR F + ++ L + T +L
Sbjct: 1145 DGQHENVQR--LIAAFNNSNFLYLLSERLYEDVFSRFVFNDYYTEEQVALTMRQVTSAL 1201
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 443 DNRLEDVESCAVIAGYHNGTFLANMIEKLYRDV-SRIRFAKLHKFKEEGLEASEYTESL 500
D + E+V+ +IA ++N FL + E+LY DV SR F + ++ L + T +L
Sbjct: 1148 DGQHENVQR--LIAAFNNSNFLYLLSERLYEDVFSRFVFNDYYTEEQVALTMRQVTSAL 1204
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 443 DNRLEDVESCAVIAGYHNGTFLANMIEKLYRDV-SRIRFAKLHKFKEEGLEASEYTESL 500
D + E+V+ +IA ++N FL + E+LY DV SR F + ++ L + T +L
Sbjct: 7193 DGQHENVQR--LIAAFNNSNFLYLLSERLYEDVFSRFVFNDYYTEEQVALTMRQVTSAL 7249
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 443 DNRLEDVESCAVIAGYHNGTFLANMIEKLYRDV-SRIRFAKLHKFKEEGLEASEYTESL 500
D + E+V+ +IA ++N FL + E+LY DV SR F + ++ L + T +L
Sbjct: 7833 DGQHENVQR--LIAAFNNSNFLYLLSERLYEDVFSRFVFNDYYTEEQVALTMRQVTSAL 7889
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 129 ENEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIE 187
+ +A + Y G + DL D IR+ + C +QGF + G +G +E
Sbjct: 96 KEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLME 155
Query: 188 HLSDEYTK 195
LS +Y K
Sbjct: 156 RLSVDYGK 163
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.134 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,683,358
Number of Sequences: 27539
Number of extensions: 612750
Number of successful extensions: 1639
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1600
Number of HSP's gapped (non-prelim): 66
length of query: 516
length of database: 12,573,161
effective HSP length: 85
effective length of query: 431
effective length of database: 10,232,346
effective search space: 4410141126
effective search space used: 4410141126
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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