Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000446-TA|BGIBMGA000446-PA|undefined
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g37190.1 68417.m05265 expressed protein 113 3e-25
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 35 0.11
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 35 0.11
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 35 0.11
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 35 0.11
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 35 0.15
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 35 0.15
At3g16130.1 68416.m02037 expressed protein contains Pfam profile... 35 0.15
At1g52240.1 68414.m05894 expressed protein contains Pfam profile... 35 0.15
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 34 0.20
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 34 0.26
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 34 0.26
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 34 0.26
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 34 0.26
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 34 0.26
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 33 0.34
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 33 0.34
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 32 0.80
At4g00820.1 68417.m00113 calmodulin-binding protein-related cont... 32 1.1
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 31 1.4
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 31 1.4
At5g15830.1 68418.m01852 bZIP transcription factor family protei... 31 1.8
At4g13240.1 68417.m02059 hypothetical protein contains Pfam prof... 31 2.4
At4g08430.1 68417.m01392 Ulp1 protease family protein similar to... 31 2.4
At3g24620.1 68416.m03092 expressed protein contains Pfam profile... 31 2.4
At5g59540.1 68418.m07461 oxidoreductase, 2OG-Fe(II) oxygenase fa... 30 3.2
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 29 5.6
At5g08600.1 68418.m01023 U3 ribonucleoprotein (Utp) family prote... 29 9.8
At4g17510.1 68417.m02620 ubiquitin carboxyl-terminal hydrolase, ... 29 9.8
At1g79860.1 68414.m09329 expressed protein contains Pfam profile... 29 9.8
At1g72470.1 68414.m08380 exocyst subunit EXO70 family protein co... 29 9.8
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 113 bits (272), Expect = 3e-25
Identities = 133/498 (26%), Positives = 221/498 (44%), Gaps = 90/498 (18%)
Query: 4 REILTLQFGHYSNYVGAHFWNIQELSFDYSGTATTD-------LNHDILYREGQTSRNEV 56
REI+T+Q G ++N+VG+HFWN Q+ + +D L+ D+LYR G+T +
Sbjct: 2 REIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGVA 61
Query: 57 TYTPRLLIADLKGALKTLPQSGGL----SDDAQETDLQW-DTVEKIEEPPPEKNQYLAAI 111
TYTPRL+ +LKGAL T+ G L S ++ W V+ P ++N +L ++
Sbjct: 62 TYTPRLVSVNLKGALGTMSSRGTLYNEGSSSRSDSSATWFGDVDTQRSEPRKRNLFLQSL 121
Query: 112 DSVQTTVADGK----KDYNL-----EENEAFDIYPTG----------RGVWK-----SDY 147
+ V K +D ++ EE E + + G+W ++Y
Sbjct: 122 YEEEHVVGKEKAKEIEDKDIVGCLDEEVECWTDFSKSHYHPQSLYELNGLWMDSQAFNNY 181
Query: 148 G---DLFS---------DNIRKYVEECDSMQGFQINFDCTDGFAGLALGCIEHLSDEYTK 195
G D+FS D +R +VEECD +QG + D + GF+ +A +E+++DEYT
Sbjct: 182 GIGKDVFSEASRGEEICDRLRFFVEECDHIQGIKFLVDDSGGFSAVAADFLENMADEYTN 241
Query: 196 -PILAYPIIASHFPDNNSNTQEERDISN-LRDSIRLVNILLSIQELSEHATMYVPLCTGE 253
P+L Y + S ++ +SN L D+I S LS ++ P+
Sbjct: 242 VPVLLYSVRTP-----MSQMSSKKTVSNKLHDAI-------SFSRLSSFCKLFTPI---- 285
Query: 254 KGWRKPGNARTFDCLNYDPKLYYHSSAILASAIDTLSQKYRHKSNIHTMSDICADM---- 309
G ++ LN + Y SSA+ A+A+ + + +R + S++ M
Sbjct: 286 -GLPSLTGSKASKFLNLGDEKPYRSSAVYAAALHSSTIPFRMQPTSSDSSEVSNSMDVNT 344
Query: 310 -----TGYGRKMTAASL--GMPIAINESQYLIDYLNERIQPIYSCITPGCKIANDKLFQL 362
TG GR+ A L MP + L + L +Q + +T + +++ +
Sbjct: 345 LVQLLTGRGRQNIVAILDSAMPAPTLAGKQLENTLLTSLQALTPEVTE--DVEDNQAVES 402
Query: 363 ITIRGIPESYLKAPPKEAKAQQNLPAYRCNSVKEMFELYFQANNFLSATNLTVNEQPLNL 422
+ I G L++ KEA L + N+V +E L NL+V+ PL +
Sbjct: 403 MCILGA----LRSEDKEA-----LVSEVKNAVDASYEQATTKGKPLFC-NLSVSRCPLPV 452
Query: 423 KTPFPQIFTKNLNKYGFI 440
PFP IF + + G I
Sbjct: 453 PLPFPSIFGNLVGRKGEI 470
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 35.1 bits (77), Expect = 0.11
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGFAGLALG--CIEHLSDEYTK 195
DL D IRK + C +QGF + F+ G G LG +E LS +Y K
Sbjct: 116 DLCLDRIRKLADNCTGLQGFLV-FNAVGGGTGSGLGSLLLERLSVDYGK 163
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 460 NGTFLANMIEKLYR--DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 512
N T +A + ++ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 35.1 bits (77), Expect = 0.11
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGFAGLALG--CIEHLSDEYTK 195
DL D IRK + C +QGF + F+ G G LG +E LS +Y K
Sbjct: 116 DLCLDRIRKLADNCTGLQGFLV-FNAVGGGTGSGLGSLLLERLSVDYGK 163
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 35.1 bits (77), Expect = 0.11
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGFAGLALG--CIEHLSDEYTK 195
DL D IRK + C +QGF + F+ G G LG +E LS +Y K
Sbjct: 116 DLCLDRIRKLADNCTGLQGFLV-FNAVGGGTGSGLGSLLLERLSVDYGK 163
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 460 NGTFLANMIEKLYR--DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 512
N T +A + ++ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 35.1 bits (77), Expect = 0.11
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGFAGLALG--CIEHLSDEYTK 195
DL D IRK + C +QGF + F+ G G LG +E LS +Y K
Sbjct: 116 DLCLDRIRKLADNCTGLQGFLV-FNAVGGGTGSGLGSLLLERLSVDYGK 163
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 460 NGTFLANMIEKLYR--DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 512
N T +A + ++ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 34.7 bits (76), Expect = 0.15
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGFAGLALG--CIEHLSDEYTK 195
DL D +RK + C +QGF + F+ G G LG +E LS +Y K
Sbjct: 116 DLCLDRVRKLADNCTGLQGFLV-FNAVGGGTGSGLGSLLLERLSVDYGK 163
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 460 NGTFLANMIEKLYR--DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 512
N T +A + ++ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 34.7 bits (76), Expect = 0.15
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGFAGLALG--CIEHLSDEYTK 195
DL D +RK + C +QGF + F+ G G LG +E LS +Y K
Sbjct: 116 DLCLDRVRKLADNCTGLQGFLV-FNAVGGGTGSGLGSLLLERLSVDYGK 163
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 460 NGTFLANMIEKLYR--DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 512
N T +A + ++ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>At3g16130.1 68416.m02037 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 576
Score = 34.7 bits (76), Expect = 0.15
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 352 CKIANDKLF---QLITIRGIPESYLKAPPKEAKAQQNLPAYRCNSVKEMFELYFQANNFL 408
C++ N + Q++T IPESY+ + PK+ +A YR ++ EMF+ A FL
Sbjct: 305 CQVLNSAMAINSQVLTEMEIPESYIDSLPKKGRASLGDMIYRMITL-EMFD----AEQFL 359
Query: 409 SATNLTVNEQPLNLKTPF 426
+L+ + L+LK F
Sbjct: 360 LEMDLSSEHKILDLKNKF 377
>At1g52240.1 68414.m05894 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 412
Score = 34.7 bits (76), Expect = 0.15
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 341 IQPIYSCITPGCKIANDKLFQLITIRGIPESYLKAPPKEAKAQQNLPAYRCNSVKEMFEL 400
+Q C+ K A Q+++ IPESYL++ PK +A YR +V EMF+
Sbjct: 266 LQSQKECVNQVLKAAMAINAQVLSEMEIPESYLESLPKNGRASLGDVIYRMITV-EMFD- 323
Query: 401 YFQANNFLSATNLTVNEQPLNLK 423
A+ FL +L+ + L+LK
Sbjct: 324 ---ADQFLIEMDLSSEHKILDLK 343
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain
{Arabidopsis thaliana}
Length = 449
Score = 34.3 bits (75), Expect = 0.20
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 4 REILTLQFGHYSNYVGAHFWNI--QELSFD----YSG-TATTDLNH-DILYREGQTSRNE 55
REIL +Q G N +G+ FW + E D YSG TA L ++ Y E R
Sbjct: 2 REILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGR-- 59
Query: 56 VTYTPRLLIADLKGALKTLPQSG 78
Y PR ++ DL+ +SG
Sbjct: 60 --YVPRAVLMDLEPGTMDSIRSG 80
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIEHLSDEY-TKPILAYPIIAS 205
D D +RK E CD +QGFQ+ G +G+ I + +EY + +L + + S
Sbjct: 115 DAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 173
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3)
nearly identical to SP|P29512 Tubulin beta-2/beta-3
chain {Arabidopsis thaliana}
Length = 450
Score = 33.9 bits (74), Expect = 0.26
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 4 REILTLQFGHYSNYVGAHFWNI--QELSFDYSG--TATTDLNHD---ILYREGQTSRNEV 56
REIL +Q G N +GA FW + E D +G T +DL + + Y E R
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGR--- 58
Query: 57 TYTPRLLIADLK-GALKTL 74
+ PR ++ DL+ G + +L
Sbjct: 59 -FVPRAVLMDLEPGTMDSL 76
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIEHLSDEY-TKPILAYPIIAS 205
D D +RK E CD +QGFQ+ G +G+ I + +EY + +L + + S
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2)
nearly identical to SP|P29512 Tubulin beta-2/beta-3
chain {Arabidopsis thaliana}
Length = 450
Score = 33.9 bits (74), Expect = 0.26
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 4 REILTLQFGHYSNYVGAHFWNI--QELSFDYSG--TATTDLNHD---ILYREGQTSRNEV 56
REIL +Q G N +GA FW + E D +G T +DL + + Y E R
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGR--- 58
Query: 57 TYTPRLLIADLK-GALKTL 74
+ PR ++ DL+ G + +L
Sbjct: 59 -FVPRAVLMDLEPGTMDSL 76
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIEHLSDEY-TKPILAYPIIAS 205
D D +RK E CD +QGFQ+ G +G+ I + +EY + +L + + S
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain
{Arabidopsis thaliana}; supporting cDNA
gi|15451225|gb|AY054693.1|
Length = 449
Score = 33.9 bits (74), Expect = 0.26
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 4 REILTLQFGHYSNYVGAHFWNIQELSFDYSGTATTDLNHDILYREGQTSRNEVT---YTP 60
REIL +Q G N +GA FW + T +D+ NE + + P
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFVP 61
Query: 61 RLLIADLKGALKTLPQSG 78
R ++ DL+ +SG
Sbjct: 62 RAVLMDLEPGTMDSVRSG 79
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIEHLSDEY-TKPILAYPIIAS 205
D D +RK E CD +QGFQ+ G +G+ I + +EY + +L + + S
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain
{Arabidopsis thaliana}
Length = 444
Score = 33.9 bits (74), Expect = 0.26
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 4 REILTLQFGHYSNYVGAHFWNI--QELSFDYSGTATTDLNHDILYREGQTSRNEVT---Y 58
REIL +Q G N +GA FW + E D +G + D D+ NE + Y
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDT--DLQLERINVYFNEASGGKY 59
Query: 59 TPRLLIADLK-GALKTL 74
PR ++ DL+ G + +L
Sbjct: 60 VPRAVLMDLEPGTMDSL 76
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIEHLSDEY 193
D D +RK E CD +QGFQ+ G +G+ I + +EY
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 33.9 bits (74), Expect = 0.26
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 11/82 (13%)
Query: 4 REILTLQFGHYSNYVGAHFWNIQELSFD------YSGTATTDLNH-DILYREGQTSRNEV 56
REIL +Q G N +G+ FW + L Y G + L ++ Y E R
Sbjct: 2 REILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGR--- 58
Query: 57 TYTPRLLIADLKGALKTLPQSG 78
Y PR ++ DL+ +SG
Sbjct: 59 -YVPRAVLMDLEPGTMDSVRSG 79
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIEHLSDEY 193
D D +RK E CD +QGFQ+ G +G+ I + +EY
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain
{Arabidopsis thaliana}
Length = 444
Score = 33.5 bits (73), Expect = 0.34
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 4 REILTLQFGHYSNYVGAHFWNI--QELSFDYSGTATTDL-----NHDILYREGQTSRNEV 56
REIL +Q G N +GA FW + E D++G D D+ + E +
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGK--- 58
Query: 57 TYTPRLLIADLK-GALKTL 74
Y PR ++ DL+ G + +L
Sbjct: 59 -YVPRAVLMDLEPGTMDSL 76
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain
{Arabidopsis thaliana}
Length = 449
Score = 33.5 bits (73), Expect = 0.34
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 4 REILTLQFGHYSNYVGAHFWNI--QELSFD----YSGTATTDLNH-DILYREGQTSRNEV 56
REIL +Q G N +G+ FW + E D Y G + L ++ Y E R
Sbjct: 2 REILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGR--- 58
Query: 57 TYTPRLLIADLK 68
Y PR ++ DL+
Sbjct: 59 -YVPRAILMDLE 69
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIEHLSDEY-TKPILAYPIIAS 205
D D +RK E CD +QGFQ+ G +G+ I + +EY + +L + + S
Sbjct: 114 DAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain
{Arabidopsis thaliana}
Length = 447
Score = 32.3 bits (70), Expect = 0.80
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 4 REILTLQFGHYSNYVGAHFWNI--QELSFDYSGTATTDLNHDILYREGQTSRNEVT---Y 58
REIL +Q G N +G+ FW + E D +G D + D+ NE + Y
Sbjct: 2 REILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGRY 60
Query: 59 TPRLLIADLKGALKTLPQSG 78
PR ++ DL+ +SG
Sbjct: 61 VPRAVLMDLEPGTMDSIRSG 80
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIEHLSDEY-TKPILAYPIIAS 205
D D +RK E CD +QGFQ+ G +G+ I + +EY + +L + + S
Sbjct: 115 DAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 173
>At4g00820.1 68417.m00113 calmodulin-binding protein-related
contains Pfam profile PF00612: IQ calmodulin-binding
motif
Length = 534
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 401 YFQANNFLSATNLTVNEQPLNLKTPFPQIFTKNLNKYGFIKNDNRLEDVESCAVIAGY 458
++Q +NF SAT +P+ +++ P+I + + Y + N L S +GY
Sbjct: 359 HYQQHNFSSATPSPAKSRPIQIRSASPRIQRDDRSAYNYTSNTPSLRSNYSFTARSGY 416
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 4 REILTLQFGHYSNYVGAHFWNIQELSFDYSGTATTDLNHDILYREGQT------SRNEVT 57
REI+TLQ G N +G FW ++L ++ G + + D + G ++
Sbjct: 3 REIITLQVGQCGNQIGMEFW--KQLCLEH-GISKDGILEDFATQGGDRKDVFFYQADDQH 59
Query: 58 YTPRLLIADLK 68
Y PR L+ DL+
Sbjct: 60 YIPRALLIDLE 70
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 4 REILTLQFGHYSNYVGAHFWNIQELSFDYSGTATTDLNHDILYREGQT------SRNEVT 57
REI+TLQ G N +G FW ++L ++ G + + D + G ++
Sbjct: 3 REIITLQVGQCGNQIGMEFW--KQLCLEH-GISKDGILEDFATQGGDRKDVFFYQADDQH 59
Query: 58 YTPRLLIADLK 68
Y PR L+ DL+
Sbjct: 60 YIPRALLIDLE 70
>At5g15830.1 68418.m01852 bZIP transcription factor family protein
similar to common plant regulatory factor 7 GI:9650828
from [Petroselinum crispum]; contains Pfam profile:
PF00170 bZIP transcription factor
Length = 186
Score = 31.1 bits (67), Expect = 1.8
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 7/126 (5%)
Query: 387 PAYRCNSVKEMFEL-YFQANNFLSATNLTVNEQPLNLKTPFPQIFTKNLNKYGFIKNDNR 445
P Y +S+ M + YF NN+ + N + N LN+ +PQI + LN + N++
Sbjct: 3 PNYDSSSLNNMQQQDYFNLNNYYNNLNPSTNNNNLNI-LQYPQI--QELNLQSPVSNNST 59
Query: 446 LED--VESCAVIAGYHNGTFLANMIEKLYRDVSRIRFAKLHKFKEEGLEASEYTESLDKL 503
D E VI ++N E R R + + SE + LDKL
Sbjct: 60 TSDDATEEIFVINERKQRRMVSNR-ESARRSRMRKQRHLDELLSQVAWLRSENHQLLDKL 118
Query: 504 AEFKDN 509
+ DN
Sbjct: 119 NQVSDN 124
>At4g13240.1 68417.m02059 hypothetical protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 517
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 361 QLITIRGIPESYLKAPPKEAKAQQNLPAYRCNSVKEMFELYFQANNFLSATNLTVNEQPL 420
Q+++ IP+SY+++ PK + Y K + E +F FLS +L+ + L
Sbjct: 263 QVLSEMAIPDSYIESLPKNGRVSLGDSLY-----KSITEEWFDPEQFLSTLDLSTEHKVL 317
Query: 421 NLK 423
++K
Sbjct: 318 DVK 320
>At4g08430.1 68417.m01392 Ulp1 protease family protein similar to
At5g45570, At5g28235; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 808
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 64 IADLKGALKTLPQSGGLSDDAQETDLQWDTVEKIEEPPPEKNQYLAAIDSVQTTVADGKK 123
+ +++ A K L + D ++T + VEK+E+P PE + ++ V + + KK
Sbjct: 360 VKNMEAATKVLTKKKVAKSDKKKTIVN---VEKVEKPKPEMKKTAVKVEKVDSPKPEKKK 416
Query: 124 DYNLEENEAFD 134
+ FD
Sbjct: 417 SVVAPTTKTFD 427
>At3g24620.1 68416.m03092 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315); expression
supported by MPSS
Length = 523
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 361 QLITIRGIPESYLKAPPKEAKAQQNLPAYRCNSVKEMFELYFQANNFLSATNLTVNEQPL 420
Q+++ IPESY+ + PK +A Y K + E +F FL+ +++ + L
Sbjct: 274 QVLSEMEIPESYIDSLPKNGRASLGDSIY-----KSITEEWFDPEQFLAMLDMSTEHKVL 328
Query: 421 NLK 423
+LK
Sbjct: 329 DLK 331
>At5g59540.1 68418.m07461 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to
desacetoxyvindoline-4-hydroxylase [Catharanthus roseus]
GI:2352812; contains Pfam profile PF03171:
oxidoreductase, 2OG-Fe(II) oxygenase family
Length = 366
Score = 30.3 bits (65), Expect = 3.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 369 PESYLKAPPKEAKAQQNLPAYRCNSVKEMFELYFQ 403
P S + P KE +++N P YR ++KE +++F+
Sbjct: 318 PNSRVYGPMKELVSEENPPKYRDITIKEYSKIFFE 352
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 460 NGTFLANMIEKLYR--DVSRIRFAKLHKFKEEGLEASEYTESLDKLAEFKDNYED 512
N T +A + ++ D+ + A +H + EG+E E++E+ + LA + +YE+
Sbjct: 380 NNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 29.1 bits (62), Expect = 7.4
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 149 DLFSDNIRKYVEECDSMQGFQINFDCTDGFAGLALG--CIEHLSDEYTK 195
D + +RK + C +QGF + F+ G G LG +E LS ++ K
Sbjct: 116 DTCLERLRKLADNCTGLQGFLV-FNAVGGGTGSGLGSLLLERLSVDFGK 163
>At5g08600.1 68418.m01023 U3 ribonucleoprotein (Utp) family protein
contains Pfam profile: PF04615 Utp14 protein
Length = 822
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 455 IAGYHNGTFLANMIEKLYRDVSRIRFAKLHKFKEEGLEASEYTESLDK 502
+ G H + L+NMI ++ +D + A L K ++E LE E + K
Sbjct: 168 LQGLHGNSQLSNMISRMRKDTQSLVHAPLPKPEQERLERDVANELVYK 215
>At4g17510.1 68417.m02620 ubiquitin carboxyl-terminal hydrolase,
putative / ubiquitin thiolesterase, putative similar to
SP|Q9JKB1 Ubiquitin carboxyl-terminal hydrolase isozyme
L3 (EC 3.4.19.12) (UCH- L3) (Ubiquitin thiolesterase L3)
{Mus musculus}; contains Pfam profile PF01088: Ubiquitin
carboxyl-terminal hydrolase, family 1
Length = 234
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 439 FIKNDNRLEDVESCAVIAG 457
F++ND+++ED S AVIAG
Sbjct: 143 FLENDSQIEDAHSVAVIAG 161
>At1g79860.1 68414.m09329 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 515
Score = 28.7 bits (61), Expect = 9.8
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 347 CITPGCKIANDKLFQLITIRGIPESYLKAPPKEAKAQQNLPAYRCNSVKEMFELYFQANN 406
C+ K A Q++ IPESY+ + PK +A Y+ +V +F +
Sbjct: 264 CVNQVLKAAMAINAQVLFEMEIPESYIDSLPKNGRASLGDQMYKNITVD-----FFDPDQ 318
Query: 407 FLSATNLTVNEQPLNLK 423
FLS+ +++ + ++LK
Sbjct: 319 FLSSMDMSSEHKIVDLK 335
>At1g72470.1 68414.m08380 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit;
Length = 633
Score = 28.7 bits (61), Expect = 9.8
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 82 DDAQETDLQWDTV------EK-IEEPPPEKNQYLAAIDSVQTTVADGKKDYNLEENEAFD 134
D A++ ++WD EK I P E N YL A+D +Q V+ G + N N A
Sbjct: 24 DSAEKVIIRWDATASEEAREKMIFNDPQEVNLYLNAVDEIQKYVSSGGEIEN-RANSAIQ 82
Query: 135 I 135
I
Sbjct: 83 I 83
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.134 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,837,057
Number of Sequences: 28952
Number of extensions: 561406
Number of successful extensions: 1479
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1425
Number of HSP's gapped (non-prelim): 59
length of query: 516
length of database: 12,070,560
effective HSP length: 84
effective length of query: 432
effective length of database: 9,638,592
effective search space: 4163871744
effective search space used: 4163871744
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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