Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000445-TA|BGIBMGA000445-PA|IPR001766|Fork head
transcription factor
(390 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10836| Best HMM Match : Fork_head (HMM E-Value=0) 102 6e-22
SB_15898| Best HMM Match : Fork_head (HMM E-Value=0) 97 2e-20
SB_38328| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 3e-19
SB_11344| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 1e-17
SB_10139| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 2e-17
SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 5e-17
SB_3400| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 7e-17
SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 9e-17
SB_5331| Best HMM Match : Fork_head (HMM E-Value=0) 82 9e-16
SB_5069| Best HMM Match : Fork_head (HMM E-Value=0) 81 2e-15
SB_53442| Best HMM Match : Fork_head (HMM E-Value=0) 80 3e-15
SB_13048| Best HMM Match : Fork_head (HMM E-Value=0) 80 3e-15
SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 3e-15
SB_34638| Best HMM Match : Fork_head (HMM E-Value=0) 78 1e-14
SB_47058| Best HMM Match : Fork_head (HMM E-Value=0) 78 1e-14
SB_32062| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_15500| Best HMM Match : Fork_head (HMM E-Value=1.7e-39) 73 5e-13
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 2e-12
SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29) 62 6e-10
SB_12905| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 7e-10
SB_14691| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 1e-09
SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_56358| Best HMM Match : Fork_head (HMM E-Value=1.2e-30) 54 1e-07
SB_51547| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_647| Best HMM Match : Fork_head (HMM E-Value=3.5e-21) 42 6e-04
SB_5489| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_38984| Best HMM Match : Fork_head (HMM E-Value=3e-06) 37 0.024
SB_24033| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 34 0.23
SB_50353| Best HMM Match : DREPP (HMM E-Value=2) 33 0.30
SB_40026| Best HMM Match : Fork_head (HMM E-Value=4.2e-05) 33 0.40
SB_19734| Best HMM Match : RNA_pol_Rpb1_5 (HMM E-Value=0) 33 0.52
SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19) 32 0.69
SB_44591| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_29587| Best HMM Match : zf-XS (HMM E-Value=8.9) 31 1.6
SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12) 30 2.8
SB_12735| Best HMM Match : PT (HMM E-Value=0.36) 30 3.7
SB_50303| Best HMM Match : zf-C2H2 (HMM E-Value=1.6e-25) 29 4.9
SB_21766| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-15) 29 4.9
SB_40744| Best HMM Match : Myosin_head (HMM E-Value=4.7e-09) 29 4.9
SB_57502| Best HMM Match : Toxin_8 (HMM E-Value=8.8) 29 6.4
SB_7282| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45) 29 8.5
SB_49724| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
SB_4001| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0056) 29 8.5
SB_59643| Best HMM Match : DUF1610 (HMM E-Value=3.3) 29 8.5
SB_50447| Best HMM Match : ProQ (HMM E-Value=0.44) 29 8.5
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 29 8.5
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
SB_21591| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
>SB_10836| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 458
Score = 102 bits (244), Expect = 6e-22
Identities = 59/145 (40%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSVRHNLSLNKCFE 195
KP YS+S LI MA++ S LPV +IYN++ HFPYF+ A GWKNSVRHNLSLNKCF+
Sbjct: 122 KPPYSFSSLIFMAIEESPNKRLPVKDIYNWIMDHFPYFRDARLGWKNSVRHNLSLNKCFK 181
Query: 196 KIEKPSTNGSQRKGCLWAMNPSKVGKMDEEVQKWSRKDPQAIKKAMVYPESLEALERGEM 255
K++K + KG LW ++P + + RK P + + + G
Sbjct: 182 KVDK-DKGQNVGKGSLWTVDPD----FRPNLLQALRKTPSYNNFHHLLSTPPPSPKNGHT 236
Query: 256 KYSAVGGDTDIEDDADVDGDTEMDA 280
S GG D +DVD D E +A
Sbjct: 237 LKSPNGGQ---YDSSDVDPDAEAEA 258
>SB_15898| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 460
Score = 97.5 bits (232), Expect = 2e-20
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSVRHNLSLNKCFE 195
KP YSY+ LI A+ +S + +SEIY ++C HFPY+K A NGWKNS+RHNLSLNKCF
Sbjct: 73 KPPYSYANLITFAINSSPEKKMTLSEIYQWICDHFPYYKEAGNGWKNSIRHNLSLNKCFI 132
Query: 196 KIEKPSTNGSQRKGCLWAMNPSKVGKMDEEVQKWSRKDPQA 236
K+ P + KG WA++ + + Q RK ++
Sbjct: 133 KV--PRSKDDPGKGSYWAIDQNPQEESPGSRQNRKRKTSES 171
>SB_38328| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 93.5 bits (222), Expect = 3e-19
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Query: 119 SQTKYLSAHGKTVGEFP--KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTA 176
S T + A GK + P KP YSY LIAMA++ S L ++ IY ++ FPY++
Sbjct: 25 SPTDCIKAEGKDTSKDPNVKPPYSYVALIAMAIRESPEKRLTLNGIYQYIISKFPYYEKN 84
Query: 177 PNGWKNSVRHNLSLNKCFEKIEKPSTNGSQRKGCLWAMNPS 217
GW+NS+RHNLSLN+CF K+ P G +RKG W ++P+
Sbjct: 85 KKGWQNSIRHNLSLNECFIKV--PREGGGERKGNYWTLDPA 123
>SB_11344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 87.8 bits (208), Expect = 1e-17
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 182 NSVRHNLSLNKCFEKIEKPSTNGSQRKGCLWAMNPSKVGKMDEEVQKWSRKDPQAIKKAM 241
NSVRHNLSLNK F K+E+P SQRKGCLW++ P + +MD+E++KW +K +AI+ +M
Sbjct: 299 NSVRHNLSLNKAFCKLERPQ-GASQRKGCLWSLKPERRDQMDKEIKKWKKKHAEAIRASM 357
Query: 242 VYPESLEALERGEMKYSAVGGDTDIEDDADVDGDTEM 278
+PE L+ + +ED A D E+
Sbjct: 358 AHPEELQVSSDDLEDTEHLVPQNQVEDLAAADAAKEL 394
Score = 62.9 bits (146), Expect = 4e-10
Identities = 27/36 (75%), Positives = 31/36 (86%)
Query: 134 FPKPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQH 169
+PKP +SYSCLIAMALKNS +G+LPVSEIY FM H
Sbjct: 168 YPKPLFSYSCLIAMALKNSDSGTLPVSEIYKFMIAH 203
>SB_10139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 87.4 bits (207), Expect = 2e-17
Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Query: 125 SAHGKTVGEFPKPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSV 184
S G V E KP+ SY LI A+ + L +S+IYN++ H+PYF+ GW+NS+
Sbjct: 88 SVFGYHVTEEEKPSQSYIGLIGKAIMSVPQKKLVLSDIYNYILTHYPYFRNKGAGWRNSI 147
Query: 185 RHNLSLNKCFEKIEKPSTNGSQRKGCLWAMNP 216
RHNLSLN+CF K+ + S+NG KG WA+NP
Sbjct: 148 RHNLSLNECFVKVGR-SSNG---KGHFWAINP 175
>SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 392
Score = 85.8 bits (203), Expect = 5e-17
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSVRHNLSLNKCFE 195
KP YSY LI MA+ +S L +SEIY+F+ Q FP+++T WKNS+RHNL+LN CF
Sbjct: 43 KPPYSYIALICMAITSSPQRQLTLSEIYDFISQRFPFYQTCSIKWKNSIRHNLTLNDCFI 102
Query: 196 KIEKPSTNGSQRKGCLWAMNPSKVGKMD 223
K+ P KG W ++P+ V D
Sbjct: 103 KL--PREPNRPGKGNYWTIDPTSVDMFD 128
>SB_3400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 85.4 bits (202), Expect = 7e-17
Identities = 40/98 (40%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTA-PNGWKNSVRHNLSLNKCF 194
KP YSY LI+MA+K S + ++ IY+F+ FPY+ GW+NS+RHNLSLN+CF
Sbjct: 61 KPPYSYVALISMAIKQSPGRKITLNGIYHFITSAFPYYTWQNKRGWQNSIRHNLSLNRCF 120
Query: 195 EKIEKPSTNGSQRKGCLWAMNPSKVGKMDEEVQKWSRK 232
K+ + + KGC W ++P+ +M E+ + W R+
Sbjct: 121 VKVHREKADPG--KGCYWTLDPA-YEEMFEDGKYWRRR 155
>SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 85.0 bits (201), Expect = 9e-17
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSVRHNLSLNKCFE 195
KP YSY LIAMA++++ + +S IY+F+ FPY++ GW+NS+RHNLSLN+CF
Sbjct: 58 KPPYSYIALIAMAIQSAPEKRITLSGIYSFIMDRFPYYRNNKQGWQNSIRHNLSLNECFV 117
Query: 196 KIEKPSTNGSQRKGCLWAMNPSKVGKMD 223
K+ P + KG W ++P + +
Sbjct: 118 KV--PRDDKKPGKGSFWMLDPDSLNMFE 143
>SB_5331| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 503
Score = 81.8 bits (193), Expect = 9e-16
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 119 SQTKYLSAHGKTVGEFPKPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPN 178
S K S GK+ E KP YSY+ LI A+ ++ L +S IY + +++PY++TA
Sbjct: 101 SGDKSSSEGGKS--EDGKPPYSYAQLIVQAILSATDKQLTLSGIYAHITKNYPYYRTADK 158
Query: 179 GWKNSVRHNLSLNKCFEKIEKPSTNGSQRKGCLWAMNPSKVGKMDEEVQKWSRK 232
GW+NS+RHNLSLN+ F K+ P KG W ++PS K+ E+ + R+
Sbjct: 159 GWQNSIRHNLSLNRYFVKV--PRAQDEPGKGSFWRIDPSCEQKLAEQAFRKRRQ 210
>SB_5069| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 331
Score = 80.6 bits (190), Expect = 2e-15
Identities = 36/84 (42%), Positives = 57/84 (67%), Gaps = 4/84 (4%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSVRHNLSLNKCFE 195
KPA+SY LIAMA+ ++ + + + +IY ++ +FPY++ W+NS+RHNLSLN+CF
Sbjct: 82 KPAHSYIALIAMAILSNSSKKMILGDIYQYISDNFPYYRNKDKSWRNSIRHNLSLNECFI 141
Query: 196 KIEKPSTNGSQRKGCLWAMNPSKV 219
K + S NG KG WA++P+ +
Sbjct: 142 KAGR-SENG---KGNYWAIHPANL 161
>SB_53442| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 407
Score = 80.2 bits (189), Expect = 3e-15
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 14/151 (9%)
Query: 67 IHILDAQSIGQSRTILANGNKNQATILIDNSSLSNGRQLMKTSISNTYTVDNSQTKYLSA 126
+H + Q I ++ I AN + ++ D+ +G SIS +D
Sbjct: 41 LHSISVQDIAPNQPI-ANSTTSAESVTSDSEQSESGDSKSSESISKEPNIDYKNDPN--- 96
Query: 127 HGKTVGEFPKPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSVRH 186
H KP YSY+ LI MA+++++ + +S IY ++ ++F +++ A W+NS+RH
Sbjct: 97 H--------KPPYSYATLICMAMRDTKRVKITLSAIYKWIKENFMFYRVADPTWQNSIRH 148
Query: 187 NLSLNKCFEKIEKPSTNGSQRKGCLWAMNPS 217
NLSLNKCF K+ P KG W ++P+
Sbjct: 149 NLSLNKCFVKV--PRKKDEPGKGGFWRIDPA 177
>SB_13048| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 311
Score = 80.2 bits (189), Expect = 3e-15
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSVRHNLSLNKCFE 195
KP YSY LI MA+ S L +S+I F+ + FPY++ W+NS+RHNLSLN CF
Sbjct: 64 KPPYSYIALITMAILQSPQRKLTLSDICEFIKRRFPYYREKFPSWQNSIRHNLSLNDCFV 123
Query: 196 KIEKPSTNGSQRKGCLWAMNPSKVGKMD 223
K+ P G+ KG W ++P+ G D
Sbjct: 124 KM--PREPGNPGKGNYWTLDPASEGMFD 149
>SB_665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 80.2 bits (189), Expect = 3e-15
Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 121 TKYLSAHGKTVGEFPKPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGW 180
T++L + KP SY LI+ A+ +S L +S+IYNF+ +PYF+T GW
Sbjct: 65 TQFLRFNSFVTYSHEKPNQSYISLISEAILSSPEQKLILSDIYNFILTRYPYFRTKGTGW 124
Query: 181 KNSVRHNLSLNKCFEKIEKPSTNGSQRKGCLWAMN 215
+NS+RHNLSLN+CF K + S NG KG WA++
Sbjct: 125 RNSIRHNLSLNECFVKAGR-SPNG---KGHFWAID 155
>SB_34638| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 312
Score = 78.2 bits (184), Expect = 1e-14
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSVRHNLSLNKCFE 195
KP +SY LI M+++ S ++EIY F+ FPYF+ W+NS+RHNLSLN CF
Sbjct: 92 KPPFSYIALITMSIEASPYRMRTLNEIYEFIMTRFPYFRKNQQKWQNSIRHNLSLNDCFV 151
Query: 196 KIEKPSTNGSQRKGCLWAMNPS 217
K+ + S G KG W ++PS
Sbjct: 152 KVPR-SIFGKPGKGNYWTLHPS 172
>SB_47058| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 312
Score = 78.2 bits (184), Expect = 1e-14
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSVRHNLSLNKCFE 195
KP +SY LI M+++ S ++EIY F+ FPYF+ W+NS+RHNLSLN CF
Sbjct: 92 KPPFSYIALITMSIEASPYRMRTLNEIYEFIMTRFPYFRKNQQKWQNSIRHNLSLNDCFV 151
Query: 196 KIEKPSTNGSQRKGCLWAMNPS 217
K+ + S G KG W ++PS
Sbjct: 152 KVPR-SIFGKPGKGNYWTLHPS 172
>SB_32062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 77.4 bits (182), Expect = 2e-14
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSVRHNLSLNKCFE 195
KP YSY LI MA++ S L +SEIY F+ FPY++ W+NS+RH+LS N CF
Sbjct: 39 KPPYSYISLITMAIQQSPNKMLTLSEIYQFIMDLFPYYRQNQQRWQNSIRHSLSFNDCFV 98
Query: 196 KIEKPSTNGSQRKGCLWAMNPSKVGKMDE 224
K+ P + KG W ++P G M E
Sbjct: 99 KV--PRSPDRPGKGSYWTLHPD-CGNMFE 124
>SB_15500| Best HMM Match : Fork_head (HMM E-Value=1.7e-39)
Length = 554
Score = 72.5 bits (170), Expect = 5e-13
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSVRHNLSLNKCFE 195
KP +SY LIA A+ NS L ++EI ++ +H+ +F+ + GWKNSVRHNLS NKCF
Sbjct: 133 KPPHSYIALIATAILNSPEKRLTLTEINEYLVKHYVFFRGSYQGWKNSVRHNLSFNKCFV 192
Query: 196 KI 197
KI
Sbjct: 193 KI 194
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 70.9 bits (166), Expect = 2e-12
Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSVRHNLSLNKCFE 195
KP+ SY LI+ A+ S L +SEIY+ + FP+F GWKN+VRHNLSL++CF
Sbjct: 19 KPSTSYVALISTAILESAEKRLTLSEIYDAIELKFPWFTATRMGWKNTVRHNLSLHECFV 78
Query: 196 KIEKPSTNGSQRKGCLWAMNPSKVGKMDEEVQKWSRKDPQ--AIKKAMVYPESLEALERG 253
K E S+NG K C W ++ G+ K K+ + A + + Y +S E + R
Sbjct: 79 KGEL-SSNG---KSCYWRVHERFEGRFRRGEYKRPVKESKEGAGETRVTYRKSDEDIGRK 134
Query: 254 EMKYSA 259
K S+
Sbjct: 135 VYKASS 140
>SB_16501| Best HMM Match : Fork_head (HMM E-Value=3.3e-29)
Length = 594
Score = 62.5 bits (145), Expect = 6e-10
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSVRHNLSLNKCFE 195
+P ++Y+ LI A+ +S L ++EIY++ + F YF+ WKN+VRHNLSL+KCF
Sbjct: 408 RPPFTYASLIRQAILDSPDTQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCF- 466
Query: 196 KIEKPSTNGS----QRKGCLWAMNPSKVGKMDEEVQKWSRK---DPQAIKKAMVYPESLE 248
+ K + G+ + + SKV + K R+ P + + +
Sbjct: 467 -VRKENVKGAVWMVDEEEFMKRRPQSKVTHSSASLNKQERERAVQPSCLVGLPTQVTTFD 525
Query: 249 ALERGEMKYSAVGGDTDIEDDADVDGDTEMDAD 281
A R + G + +I A+ G D D
Sbjct: 526 AGSRDPNHAGSNGSEEEIPQGAEAAGKRAADDD 558
>SB_12905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 62.1 bits (144), Expect = 7e-10
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWKNSVRHNLSLNKCFE 195
+P YSY LIAMA++NS L + I F+ FP+++ WK +R+NLSLN CF
Sbjct: 109 RPPYSYIALIAMAVQNSPEKRLTLDGICKFIRDRFPFYRETYPSWKICIRNNLSLNDCF- 167
Query: 196 KIEKPSTNGSQRKGCLWAMNP 216
I+ + KG W ++P
Sbjct: 168 -IKTGIKSDEPLKGNYWTLDP 187
>SB_14691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 61.7 bits (143), Expect = 1e-09
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYF-KTAPNGWKNSVRHNLSLNKCF 194
K A ++ +IA ++ + T + +S IY+F+ +++P+F K GW+NSVRHNLS N CF
Sbjct: 125 KNAETFVAVIAQSILSVPTKRMTLSSIYSFIAKNYPHFDKEKGPGWRNSVRHNLSSNDCF 184
Query: 195 EKIEKPSTNGSQRKGCLWAMNP 216
K + + NG KG W ++P
Sbjct: 185 VKASR-AENG---KGHYWMIHP 202
>SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 58.0 bits (134), Expect = 1e-08
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 8/78 (10%)
Query: 139 YSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFK-----TAPNGWKNSVRHNLSLNKC 193
YSY+ LI A+++S L +S+IY++M PYF+ + GWKNS+RHNLSL+
Sbjct: 67 YSYADLITQAIQSSPEKRLTLSQIYDWMVNSVPYFRDKGDSNSSAGWKNSIRHNLSLHSK 126
Query: 194 FEKIEKPSTNGSQRKGCL 211
F +++ G+ + C+
Sbjct: 127 FVRVQ---NEGNGKSSCI 141
>SB_56358| Best HMM Match : Fork_head (HMM E-Value=1.2e-30)
Length = 289
Score = 54.4 bits (125), Expect = 1e-07
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 169 HFPYFKTAPNGWKNSVRHNLSLNKCFEKIEKPSTNGSQRKGCLWAMNP 216
HFP+++ W+NS+RHNLS N CF KI P KG LWA++P
Sbjct: 3 HFPFYRDNTQRWQNSLRHNLSFNDCFVKI--PRRPDQPGKGSLWALHP 48
>SB_51547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 52.4 bits (120), Expect = 6e-07
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 157 LPVSEIYNFMCQHFPYF-KTAPNGWKNSVRHNLSLNKCFEKIEKPSTNGSQRKGCLWAMN 215
+ +S IY+F+ + +P+F K GW+NSVRHNLS N CF K + + NG KG W ++
Sbjct: 1 MTLSCIYSFIAKTYPHFDKEKGPGWRNSVRHNLSSNDCFVKASR-AENG---KGHYWMIH 56
Query: 216 P 216
P
Sbjct: 57 P 57
>SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 52.4 bits (120), Expect = 6e-07
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 140 SYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKT-----APNGWKNSVRHNLSLNKCF 194
SYS LIA A+ S+ L + +IY++ + PYFK + GWKN++RH LSL + F
Sbjct: 750 SYSDLIARAIDQSKFQKLTLPQIYDWFVINVPYFKAKEHLPSTKGWKNAIRHTLSLRQRF 809
Query: 195 EKIEKPSTNGSQRKGCLWAMNPSKVGKMDEEVQKWSRKDPQ 235
++ P G+ + W + V + +W + Q
Sbjct: 810 VRLPDP---GNPYRS-WWTVASDDVRRQRRRKPRWKSRGTQ 846
>SB_647| Best HMM Match : Fork_head (HMM E-Value=3.5e-21)
Length = 491
Score = 42.3 bits (95), Expect = 6e-04
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 134 FPKPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTAPNGWK 181
+ +P YSY+ LI +A+ ++ + + EIY ++ + FPY+ WK
Sbjct: 58 YTRPPYSYATLILLAINSTEEKRMTLQEIYKWIEERFPYYTKCKKAWK 105
>SB_5489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 39.9 bits (89), Expect = 0.003
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 122 KYLSAHGKTVGEFPKPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFK--TAPNG 179
K K + K SYS L+A A+ +S L + EIY + + + +
Sbjct: 433 KAFRIESKPPTNYSKGTVSYSDLLAEAISSSPDKRLTLQEIYMWFEDNVAGISPSSVTHD 492
Query: 180 WKNSVRHNLSLNKCFEKIEKPSTNGSQRKGCLWAMNPS 217
WKN++RH LS K F +I ++ W +NP+
Sbjct: 493 WKNTIRHTLSRRKRFLRI----AMSEKKNKSWWTVNPA 526
>SB_38984| Best HMM Match : Fork_head (HMM E-Value=3e-06)
Length = 246
Score = 37.1 bits (82), Expect = 0.024
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 19/111 (17%)
Query: 140 SYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFK-----TAPNGWK----------NSV 184
SYS LIA A+ S L + +IY + ++ YF+ + GWK N++
Sbjct: 136 SYSDLIARAITQSTKQKLTLPQIYEWFVENVSYFRDREHLPSTKGWKLIRIPCAIIQNAI 195
Query: 185 RHNLSLNKCFEKIEKPSTNGSQRKGCLWAMNPSKVGKMDEEVQKWSRKDPQ 235
RH LSL + F + P TN + W++ K+ K +W + Q
Sbjct: 196 RHTLSLRQRFVRTVDP-TNPYR---SWWSLASEKLRKERRMKPRWKSRGTQ 242
>SB_24033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 34.3 bits (75), Expect = 0.17
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 260 VGGDTDIEDDADVDGDTEMDAD 281
+ GD DIED+ D DGDTE D D
Sbjct: 407 IDGDGDIEDETDGDGDTEDDTD 428
Score = 32.7 bits (71), Expect = 0.52
Identities = 14/19 (73%), Positives = 14/19 (73%)
Query: 263 DTDIEDDADVDGDTEMDAD 281
D DIEDD D DGDTE D D
Sbjct: 146 DGDIEDDTDGDGDTEDDTD 164
Score = 32.7 bits (71), Expect = 0.52
Identities = 14/20 (70%), Positives = 14/20 (70%)
Query: 262 GDTDIEDDADVDGDTEMDAD 281
GD DIEDD D DGD E D D
Sbjct: 213 GDDDIEDDIDGDGDIEDDTD 232
Score = 32.7 bits (71), Expect = 0.52
Identities = 14/19 (73%), Positives = 14/19 (73%)
Query: 263 DTDIEDDADVDGDTEMDAD 281
D DIEDD D DGDTE D D
Sbjct: 364 DGDIEDDTDGDGDTEDDTD 382
Score = 32.3 bits (70), Expect = 0.69
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 260 VGGDTDIEDDADVDGDTEMDAD 281
+ GD DIED+ + DGDTE D D
Sbjct: 343 IDGDGDIEDETNGDGDTEDDTD 364
Score = 31.9 bits (69), Expect = 0.91
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 262 GDTDIEDDADVDGDTEMDAD 281
GD DI+DD D DG+TE D D
Sbjct: 235 GDGDIKDDTDGDGETEDDTD 254
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/19 (68%), Positives = 14/19 (73%)
Query: 263 DTDIEDDADVDGDTEMDAD 281
D DIEDD D DG+TE D D
Sbjct: 300 DGDIEDDTDGDGNTEDDTD 318
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 260 VGGDTDIEDDADVDGDTEMDAD 281
+ G+ D EDD D DGD E D+D
Sbjct: 191 IDGEGDTEDDTDGDGDIEDDSD 212
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/19 (68%), Positives = 13/19 (68%)
Query: 263 DTDIEDDADVDGDTEMDAD 281
D DIEDD D D DTE D D
Sbjct: 282 DGDIEDDTDGDSDTEDDTD 300
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 262 GDTDIEDDADVDGDTEMDAD 281
GD DIEDD+D D D E D D
Sbjct: 203 GDGDIEDDSDGDDDIEDDID 222
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 260 VGGDTDIEDDADVDGDTEMDAD 281
+ GD DIEDD D DGD ++ D
Sbjct: 221 IDGDGDIEDDTDGDGDGDIKDD 242
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 263 DTDIEDDADVDGDTEMDAD 281
D DIEDD + DGD E D D
Sbjct: 136 DGDIEDDTECDGDIEDDTD 154
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 262 GDTDIEDDADVDGDTEMDAD 281
G+ D EDD D +GDTE D D
Sbjct: 183 GEGDTEDDIDGEGDTEDDTD 202
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 263 DTDIEDDADVDGDTEMDAD 281
D DI+DD D DG+TE D D
Sbjct: 264 DGDIKDDTDGDGETEDDTD 282
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 262 GDTDIEDDADVDGDTEMDAD 281
GD + EDD D DGD E D D
Sbjct: 245 GDGETEDDTDGDGDIEDDTD 264
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 262 GDTDIEDDADVDGDTEMDAD 281
GD +IEDD D DGD E + D
Sbjct: 399 GDDNIEDDIDGDGDIEDETD 418
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 262 GDTDIEDDADVDGDTEMDAD 281
GDTD + D D + DTE D D
Sbjct: 119 GDTDDDTDGDTEDDTECDGD 138
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 33.9 bits (74), Expect = 0.23
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 23 SDMDLYITDSLQDMLDIDIKNEIATDLSSISDFQIGTKTI--ISGNIHILDAQSIGQSRT 80
SD+ + + D LQ+M D+D NE S++ D + + I + N+ LD +S+ +
Sbjct: 432 SDISIAVIDLLQEMTDVDTLNESKEGASALIDALLEGQVIALLVQNLERLD-ESVKEESD 490
Query: 81 ILAN--GNKNQATILIDNSSLSNGRQ 104
+ N G T L DN SL+ G Q
Sbjct: 491 GVHNTLGIVENMTELQDNVSLAAGEQ 516
>SB_50353| Best HMM Match : DREPP (HMM E-Value=2)
Length = 407
Score = 33.5 bits (73), Expect = 0.30
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 189 SLNKCFEKIEKPSTNGSQRKGCLWAMNPSKVGKMDEEVQKWSRKDPQAIKKAMVYPESLE 248
S+ K +E+++KPSTNG QR ++ K G D +KW A E L
Sbjct: 90 SVVKLYEELDKPSTNGYQRS----SVTSQKFGVSD--YRKWG---------AETNAERLR 134
Query: 249 ALERGEMKYSAVGGDTDIED 268
L G + V GDT++ D
Sbjct: 135 QLGLGPLPEEKVSGDTELSD 154
>SB_40026| Best HMM Match : Fork_head (HMM E-Value=4.2e-05)
Length = 156
Score = 33.1 bits (72), Expect = 0.40
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 136 KPAYSYSCLIAMALKNSRTGSLPVSEIYNFM 166
KPA+SY+ LI MA++ S L +S IY ++
Sbjct: 61 KPAFSYNALIMMAIRGSEEKRLTLSGIYEYI 91
>SB_19734| Best HMM Match : RNA_pol_Rpb1_5 (HMM E-Value=0)
Length = 1452
Score = 32.7 bits (71), Expect = 0.52
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 208 KGCLWAMNPSKVGKMDEEVQKWSRKDPQAIKK 239
K L +NP K K++ ++ KW RK P K+
Sbjct: 429 KDLLGHLNPDKANKLESKIHKWQRKHPSVDKQ 460
>SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19)
Length = 1204
Score = 32.3 bits (70), Expect = 0.69
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 59 TKTIISGNIHILDAQSIGQSRTILAN--GNKNQATILIDNSSLSNGRQLMKTSISN-TYT 115
T+T+ G I I + Q +T+ A GN N A + S++S+G +M T N ++T
Sbjct: 728 TQTLSCGGISIQQVAQVMQQKTLTAKTVGNNNVAMSTLPLSTMSSGTVIMSTGQENDSFT 787
Query: 116 VD 117
++
Sbjct: 788 IN 789
>SB_44591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 31.5 bits (68), Expect = 1.2
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 11/148 (7%)
Query: 41 IKNEIATDLSSISDFQIGTK-TIISGNIHILDAQSIGQSRTILANGNKNQATILIDNSSL 99
+ N + S + + G K T I N +G + NGNK T+++DN+
Sbjct: 59 LDNTLTRHTSGVGNMNDGNKRTTILDNTQTRHTSGVGN----INNGNKR--TMVLDNTQT 112
Query: 100 --SNGRQLMKTSISNTYTVDNSQTKYLSAHGKT--VGEFPKPAYSYSCLIAMALKNSRTG 155
++G + T +DN+QT++ S G T V + K + + N+ G
Sbjct: 113 RHTSGVGNINNGNKRTMVLDNTQTRHTSGVGNTNNVNKRTKVLCNTQTRHTSGVGNTNNG 172
Query: 156 SLPVSEIYNFMCQHFPYFKTAPNGWKNS 183
+ + N +H NG K +
Sbjct: 173 NKRTKVLDNTQTRHTSGVANMNNGNKRT 200
>SB_29587| Best HMM Match : zf-XS (HMM E-Value=8.9)
Length = 254
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 50 SSISDFQIGTK-TIISGNIHILDAQSIGQSRTILANGNKNQATILIDNSSLSNGRQLMKT 108
S + + IG K T + N +G + NGNK + + ++G +M
Sbjct: 92 SGVGNMNIGNKRTKVLDNTQTRHTSGVGN----INNGNKRTKVLCNTQTRHTSGVAIMNN 147
Query: 109 SISNTYTVDNSQTKYLSAHG 128
T +DN+QT++ S G
Sbjct: 148 GNKRTKVLDNTQTRHTSGVG 167
>SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12)
Length = 567
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 135 PKPAYSYSCLIAMALKNSRTGSLPVSEIYNFMCQHFPYFKTA-PNG 179
P+ + +Y+C++ L+ T S+ +S +Y C H + A P+G
Sbjct: 427 PRDSGTYTCIVTNLLQRRITESVEISVLYPKSCHHIKQLRPATPSG 472
>SB_12735| Best HMM Match : PT (HMM E-Value=0.36)
Length = 1148
Score = 29.9 bits (64), Expect = 3.7
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 234 PQAIKKAMVYPESLEALERGEMKYSAVGGDTDIEDDADVDGDTEM 278
P ++ + PE L+ ++GE S G + + +D D+D D EM
Sbjct: 589 PPVTEEDIQLPEDLQLDDQGEDHGSEQGDEVETVEDVDMDKDEEM 633
>SB_50303| Best HMM Match : zf-C2H2 (HMM E-Value=1.6e-25)
Length = 319
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 201 STNGSQRKGCLWAMNPSKVGKMDEEVQKWSRKDPQAIKKAMVYPESL 247
S N QR+ LW P K GK ++E ++ + + + ++Y + +
Sbjct: 87 SRNAHQRRHSLWQQQPPKQGKEEDEEEQEQLDEGEDPNQELMYSDDM 133
>SB_21766| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-15)
Length = 281
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 201 STNGSQRKGCLWAMNPSKVGKMDEEVQKWSRKDPQAIKKAMVYPESL 247
S N QR+ LW P K GK ++E ++ + + + ++Y + +
Sbjct: 49 SRNAHQRRHSLWQQQPPKQGKEEDEEEQEQLDEGEDPNQELMYSDDM 95
>SB_40744| Best HMM Match : Myosin_head (HMM E-Value=4.7e-09)
Length = 525
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 27 LYITDSLQDMLDIDIKNEIATDLSSISDFQIGTKTI 62
+ + DSL+DM D + IAT L ++++GTK I
Sbjct: 256 MLVRDSLRDMSSRDASHLIATSLLGQENWKLGTKRI 291
>SB_57502| Best HMM Match : Toxin_8 (HMM E-Value=8.8)
Length = 159
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 245 ESLEALERGEM-KYSAVGGDTDIEDDADVDGDTEMDAD 281
E + +E+G++ +Y + GD D +DD D D D + D D
Sbjct: 77 EKYKHVEKGQVCEYRSNSGDDDDDDDDDDDDDDDDDDD 114
>SB_7282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1702
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 253 GEMKYSAVGGDTDIEDDADVDGDTEMDAD 281
GE +YS G + D+ D D D D + D D
Sbjct: 175 GEYEYSVTGENEDVNGDGDDDDDDDDDDD 203
>SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2708
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 157 LPVSEIYNFMCQHFP--YFKTAPNGWKNSVRHNL 188
L + EIY+F+C FP Y + N WK S+ H L
Sbjct: 2314 LHIPEIYSFLCCFFPKVYKRVLQNQWK-SLLHQL 2346
>SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45)
Length = 565
Score = 28.7 bits (61), Expect = 8.5
Identities = 20/68 (29%), Positives = 29/68 (42%)
Query: 103 RQLMKTSISNTYTVDNSQTKYLSAHGKTVGEFPKPAYSYSCLIAMALKNSRTGSLPVSEI 162
R +K S Y V+ +T + H K F P + + I L TGSL V E+
Sbjct: 444 RDSIKRSTRLVYPVEIERTMMNNPHVKQAIAFGIPDKNVNEEICACLVTKETGSLDVGEL 503
Query: 163 YNFMCQHF 170
+ +HF
Sbjct: 504 EAWCEEHF 511
>SB_49724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 28.7 bits (61), Expect = 8.5
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 201 STNGSQRKGCLWAMNPSKVGKMDEEVQKWSRKDPQAIKKAMVYPESL 247
S N QR+ LW P K GK ++E ++ + + ++Y + +
Sbjct: 307 SRNAHQRRHSLWQQQPPKQGKEEDEEEQEQLDQGEDPNQELMYSDDM 353
>SB_4001| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0056)
Length = 508
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 261 GGDTDIEDDADVDGDTEMD 279
GGD D +DD+D DGD + D
Sbjct: 461 GGDGDDDDDSDGDGDDDSD 479
>SB_59643| Best HMM Match : DUF1610 (HMM E-Value=3.3)
Length = 363
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 263 DTDIEDDADVDGDTEMDAD 281
D D++DD DVD D ++D D
Sbjct: 141 DVDVDDDGDVDDDGDVDDD 159
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 263 DTDIEDDADVDGDTEMDAD 281
D D++DD DVDGD + D D
Sbjct: 195 DGDVDDDGDVDGDGKDDDD 213
>SB_50447| Best HMM Match : ProQ (HMM E-Value=0.44)
Length = 295
Score = 28.7 bits (61), Expect = 8.5
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 232 KDPQAIKKAMVYPESLEALE-RGEMKYSAVGGDTDIE-DDADVDGDTE 277
++PQ K + A++ G+ K + GGDTDIE D D D + E
Sbjct: 33 EEPQQTKAQLSESPVTNAVQIHGDSKENEEGGDTDIEGGDTDTDVENE 80
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 28.7 bits (61), Expect = 8.5
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 220 GKMDEEVQKWSRKDPQAIKKAMVYPESLEALERGEMKYSAVGGDTDIE-DDADVDGDTEM 278
G + EE +K R+ + ++ E ++ +E GG++D E DD D DGD E
Sbjct: 129 GLLGEE-EKNERESDEDVESNNNEDEDIQEVEDDNEGKENDGGESDEENDDDDEDGDDEG 187
Query: 279 DAD 281
D D
Sbjct: 188 DDD 190
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.7 bits (61), Expect = 8.5
Identities = 30/125 (24%), Positives = 46/125 (36%), Gaps = 10/125 (8%)
Query: 164 NFMCQHFP--YFKTAPNGWKNSVRHNLSLNKCFE-----KIEKPSTNGSQRKGCLWAMNP 216
N +C + P + NG+ + +N+CFE I TN C
Sbjct: 677 NAICTNVPGTFLCRCINGFLGDGKLCADINECFEGTANCDINAECTNSVGSYNCQCMEGY 736
Query: 217 SKVGKMDEEVQKWSRKDPQAIKKAMVYPESLEALERGEMKYSAVGGDTDIEDDADVDGDT 276
+ GK Q K P +++ V PES A E + +G T + D V +T
Sbjct: 737 TGDGK---NCQAIITKSPTTLQQTTVAPESTAAPETSVAPDTTMGPKTTVAPDTPVAPET 793
Query: 277 EMDAD 281
+ D
Sbjct: 794 TVAPD 798
>SB_21591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 263 DTDIEDDADVDGDTEMDAD 281
D D +DDAD D D + DAD
Sbjct: 76 DDDDDDDADADADADADAD 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.130 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,488,008
Number of Sequences: 59808
Number of extensions: 463464
Number of successful extensions: 4436
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4195
Number of HSP's gapped (non-prelim): 244
length of query: 390
length of database: 16,821,457
effective HSP length: 84
effective length of query: 306
effective length of database: 11,797,585
effective search space: 3610061010
effective search space used: 3610061010
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
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