GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000445-TA|BGIBMGA000445-PA|IPR001766|Fork head
transcription factor
         (390 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    40   1e-04
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   2.7  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   3.6  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   4.7  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 39.9 bits (89), Expect = 1e-04
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 14/95 (14%)

Query: 95  DNSSLSNGRQLMKTSISNTY---TVDNSQTKYLSAHGKTVGEFPKPAYSYSCLIAMALKN 151
           D++  SN +QL  T  SNT       +S +K  S+     G       SY+ LI  A+ +
Sbjct: 78  DSNKCSN-QQLANTGSSNTQLQAAASSSSSKKNSSRRNAWGNL-----SYADLITQAISS 131

Query: 152 SRTGSLPVSEIYNFMCQHFPYFK-----TAPNGWK 181
           +    L +S+IY +M Q+ PYFK      +  GWK
Sbjct: 132 ASDSRLTLSQIYEWMVQNVPYFKDKGDSNSSAGWK 166


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.4 bits (53), Expect = 2.7
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 54  DFQIGTKTIISG-NIHILDAQSIGQSRTILANGNKNQATILIDNSSLSNGRQLMKTSISN 112
           DF+   +T + G NI     +   + RT++   N    T L D  +++   +   + +  
Sbjct: 352 DFKRINETRVCGENISTFQLEERRRRRTVIEKLNIEDGTSLTDKDAINVHIRSFFSELYT 411

Query: 113 TYTVDNSQT 121
           T   DN+QT
Sbjct: 412 TDNTDNTQT 420


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.0 bits (52), Expect = 3.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 98  SLSNGRQLMKTSISNTYTVDNSQTKY 123
           SL  GR LM+ S+   YT  + Q ++
Sbjct: 465 SLFRGRALMENSVMKKYTTKSDQARH 490


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.6 bits (51), Expect = 4.7
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 218 KVGKMDEEVQKWSRKDPQAIKKAMVYPESLEALER 252
           KV   D    KW  K  +++ K M    +LE LER
Sbjct: 17  KVSPDDSAEGKWGEKVIKSLAKKMKKSSALEELER 51


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.130    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 346,289
Number of Sequences: 2123
Number of extensions: 12966
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25
Number of HSP's gapped (non-prelim): 4
length of query: 390
length of database: 516,269
effective HSP length: 65
effective length of query: 325
effective length of database: 378,274
effective search space: 122939050
effective search space used: 122939050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 49 (23.8 bits)