Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000445-TA|BGIBMGA000445-PA|IPR001766|Fork head
transcription factor
(390 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 23 3.4
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 23 3.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 3.4
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 23 4.5
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 23 4.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 4.5
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 5.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 5.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 5.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 5.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 5.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 5.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 5.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 5.9
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 23 5.9
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 7.8
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 23.4 bits (48), Expect = 3.4
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 79 RTILANGNKNQATILIDNSSLSNGRQLMKTSISNTYTVDNSQTKYLSAHGKTVGEFPKPA 138
+ L +KN + +L++G TS+ Y +D ++T+ + GK GE
Sbjct: 99 QVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTG 158
Query: 139 YSYSCLIAMALKNSRTG-----SLPVSEIYNFMCQHFPYFKTA 176
+CL + + TG + V I + +F ++ TA
Sbjct: 159 LG-NCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTA 200
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 23.4 bits (48), Expect = 3.4
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 79 RTILANGNKNQATILIDNSSLSNGRQLMKTSISNTYTVDNSQTKYLSAHGKTVGEFPKPA 138
+ L +KN + +L++G TS+ Y +D ++T+ + GK GE
Sbjct: 99 QVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTG 158
Query: 139 YSYSCLIAMALKNSRTG-----SLPVSEIYNFMCQHFPYFKTA 176
+CL + + TG + V I + +F ++ TA
Sbjct: 159 LG-NCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTA 200
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.4 bits (48), Expect = 3.4
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 86 NKNQATILIDNSSLSNGRQLMKTSISNTYTVDNSQTKYLSAHGKTVGEFPKP 137
N NQ ++ ++SLS+ + +K I N T +S + +S+ + PKP
Sbjct: 343 NSNQ---IVSDNSLSSSEEKLKQDILNLRTDISSSSSSISSSEENDFWQPKP 391
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 23.0 bits (47), Expect = 4.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 6 QCTHKHISVPKEVISWCSDMDLYITDSLQDMLDIDIKNEI 45
+CT K V K+VI + + + DSL + D D K +
Sbjct: 78 KCTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKKYRV 117
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 23.0 bits (47), Expect = 4.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 6 QCTHKHISVPKEVISWCSDMDLYITDSLQDMLDIDIKNEI 45
+CT K V K+VI + + + DSL + D D K +
Sbjct: 78 KCTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKKYRV 117
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.0 bits (47), Expect = 4.5
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 67 IHILDAQSIGQSRTILANGNKNQATILIDNSSLSNGRQ 104
+ ++ AQ G+ +LA+GNKN + ++ S+ G+Q
Sbjct: 1193 VRMVTAQLAGKP-IVLASGNKNVGVGVSNSGSVVLGKQ 1229
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 5.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 32 SLQDMLDIDIKNEIAT 47
+LQ ++D+D KN+I T
Sbjct: 19 TLQQIIDVDEKNQILT 34
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 5.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 32 SLQDMLDIDIKNEIAT 47
+LQ ++D+D KN+I T
Sbjct: 19 TLQQIIDVDEKNQILT 34
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 5.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 32 SLQDMLDIDIKNEIAT 47
+LQ ++D+D KN+I T
Sbjct: 19 TLQQIIDVDEKNQILT 34
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 5.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 32 SLQDMLDIDIKNEIAT 47
+LQ ++D+D KN+I T
Sbjct: 19 TLQQIIDVDEKNQILT 34
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 5.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 32 SLQDMLDIDIKNEIAT 47
+LQ ++D+D KN+I T
Sbjct: 19 TLQQIIDVDEKNQILT 34
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic
acetylcholine receptor subunitalpha 6 transcript
variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 5.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 32 SLQDMLDIDIKNEIAT 47
+LQ ++D+D KN+I T
Sbjct: 19 TLQQIIDVDEKNQILT 34
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 5.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 32 SLQDMLDIDIKNEIAT 47
+LQ ++D+D KN+I T
Sbjct: 87 TLQQIIDVDEKNQILT 102
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 5.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 32 SLQDMLDIDIKNEIAT 47
+LQ ++D+D KN+I T
Sbjct: 87 TLQQIIDVDEKNQILT 102
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 22.6 bits (46), Expect = 5.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 6 QCTHKHISVPKEVISWCSDMDLYITDSLQDMLDIDIK 42
+CT K V K+VI + + + DSL + D D K
Sbjct: 78 KCTDKQREVIKKVIKFLVENKPELWDSLANKYDPDKK 114
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.2 bits (45), Expect = 7.8
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 259 AVGG-DTDIEDDADVDGDTEMDA 280
AVG D D +DD D D D +++A
Sbjct: 385 AVGEVDEDDDDDGDDDDDDDVEA 407
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.314 0.130 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,955
Number of Sequences: 429
Number of extensions: 3958
Number of successful extensions: 25
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 17
length of query: 390
length of database: 140,377
effective HSP length: 59
effective length of query: 331
effective length of database: 115,066
effective search space: 38086846
effective search space used: 38086846
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 45 (22.2 bits)
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