GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000444-TA|BGIBMGA000444-PA|undefined
         (893 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    27   1.6  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     27   1.6  
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        26   3.8  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   5.0  
AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical prote...    25   6.6  
AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory a...    25   6.6  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 117 PHTGKVTEVIGEEPEFSADIVEINDTSARKSPRLNNSK-SENTMPL 161
           PH G VT +  E P F  +I++ +  S     R N  + + NT+PL
Sbjct: 568 PHAGTVTLMASESPVFDREIIQKHYLSV--EARDNGGRGNRNTVPL 611


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 763 KPNKENCTKVKKPNLISTTNFVVEERKVRRNKPS 796
           KPNKE   K  + N  S+  F+V + ++R N  S
Sbjct: 108 KPNKEQQVKTVRENDTSSFTFMVRQPEIRGNDRS 141


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 549 SATHSECERESPEELVQSNGNDKKRLSLNKIQYTSEVNENI 589
           SA+ SE ERE  + L   N     +L  + +QY  +  +N+
Sbjct: 82  SASRSETERELQQALSGGNSQAVPKLQDDLLQYKQQQQQNL 122


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 398  ESQVAETANDQDQSFNFIIDTVGNKSDNQSNISVQNSDKKQKDKRKIVTVDDESVISID 456
            ES+VA  AN ++Q  + +   V N  +N+   +V+N ++ +    ++    DE V + D
Sbjct: 1318 ESEVA--ANVENQREDEVAANVENAKENEVAANVENQNEDEVQPMEVEEERDEGVAADD 1374


>AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 25.4 bits (53), Expect = 6.6
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 765 NKENCTKVKKPNLISTTNFVVEERKVRRNK-PSNYLEESVYL 805
           N E C++ ++   I   N+V+E RK + +     Y  E++Y+
Sbjct: 71  NCEKCSEKQRSGAIKVINYVIENRKEQWDALQKKYDPENLYV 112


>AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory
           appendage protein SAP-2 protein.
          Length = 127

 Score = 25.4 bits (53), Expect = 6.6
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 765 NKENCTKVKKPNLISTTNFVVEERKVRRNK-PSNYLEESVYL 805
           N E C++ ++   I   N+V+E RK + +     Y  E++Y+
Sbjct: 71  NCEKCSEKQRSGAIKVINYVIENRKEQWDALQKKYDPENLYV 112


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.305    0.123    0.325 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,261
Number of Sequences: 2123
Number of extensions: 28774
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 7
length of query: 893
length of database: 516,269
effective HSP length: 70
effective length of query: 823
effective length of database: 367,659
effective search space: 302583357
effective search space used: 302583357
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
S2: 52 (25.0 bits)