GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000443-TA|BGIBMGA000443-PA|undefined
         (56 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6L611 Cluster: Putative uncharacterized protein; n=1; ...    31   6.0  

>UniRef50_A6L611 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides vulgatus ATCC 8482|Rep: Putative
           uncharacterized protein - Bacteroides vulgatus (strain
           ATCC 8482 / DSM 1447 / NCTC 11154)
          Length = 308

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 16/44 (36%), Positives = 26/44 (59%)

Query: 7   KEVETAGLEETSVSIEMLQLYEETKYTLLSISSGNNRYLAINGT 50
           + V+   ++ TS S ++  +YEE   +L S++  NN   AINGT
Sbjct: 61  QNVDVLEVDLTSPSYDIQLVYEEHGDSLSSVAERNNAAAAINGT 104


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.309    0.128    0.329 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,396,716
Number of Sequences: 1657284
Number of extensions: 1491780
Number of successful extensions: 3329
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3328
Number of HSP's gapped (non-prelim): 1
length of query: 56
length of database: 575,637,011
effective HSP length: 36
effective length of query: 20
effective length of database: 515,974,787
effective search space: 10319495740
effective search space used: 10319495740
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 65 (30.3 bits)