GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000443-TA|BGIBMGA000443-PA|undefined
         (56 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   0.42 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    19   5.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    19   5.2  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           19   5.2  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            18   6.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    18   6.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    18   9.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    18   9.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    18   9.1  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory
          receptor candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 0.42
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 22 EMLQLYEETKYTLLSISSGNNRYLAIN 48
          ++L L   T+   L +S+ NN YL +N
Sbjct: 7  KLLLLDSSTQPNYLILSNKNNTYLVLN 33


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 18.6 bits (36), Expect = 5.2
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 2   EDYRRKEVETAGLEETSVSIEMLQLYEETKYTLLSISSGNNR 43
           E++++ +      EE SVS      Y   K    S ++GN R
Sbjct: 144 ENFQQYDNNNFSAEENSVSEPPANFYPWMKAHGDSSATGNKR 185


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 18.6 bits (36), Expect = 5.2
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 2   EDYRRKEVETAGLEETSVSIEMLQLYEETKYTLLSISSGNNR 43
           E++++ +      EE SVS      Y   K    S ++GN R
Sbjct: 144 ENFQQYDNNNFSAEENSVSEPPANFYPWMKAHGDSSATGNKR 185


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 18.6 bits (36), Expect = 5.2
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 2   EDYRRKEVETAGLEETSVSIEMLQLYEETKYTLLSISSGNNR 43
           E++++ +      EE SVS      Y   K    S ++GN R
Sbjct: 144 ENFQQYDNNNFSAEENSVSEPPANFYPWMKAHGDSSATGNKR 185


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 18.2 bits (35), Expect = 6.9
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 13  GLEETSVSIEMLQLYEETKYTLLSISSGNNRYLAINGTIPSNI 55
           G+    V++      +E K T  S   GN  +    G   +NI
Sbjct: 104 GMGSPGVNVPEYPWMKEKKTTRKSSQQGNFEFRNTVGATTANI 146


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
          protein.
          Length = 370

 Score = 18.2 bits (35), Expect = 6.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 14 LEETSVSIEMLQLYEETKYTLLSISS 39
          L+ET+   +ML   E+T  + +S  S
Sbjct: 4  LQETTPKRDMLDSQEKTPLSSVSYPS 29


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory
          receptor candidate 55 protein.
          Length = 402

 Score = 17.8 bits (34), Expect = 9.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)

Query: 30 TKYTLLSISS 39
          T YTLLS+ S
Sbjct: 63 TSYTLLSVYS 72


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 17.8 bits (34), Expect = 9.1
 Identities = 5/10 (50%), Positives = 8/10 (80%)

Query: 42  NRYLAINGTI 51
           NRY+ +NG +
Sbjct: 830 NRYIILNGRL 839


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory
          receptor candidate 11 protein.
          Length = 344

 Score = 17.8 bits (34), Expect = 9.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)

Query: 30 TKYTLLSISS 39
          T YTLLS+ S
Sbjct: 63 TSYTLLSVYS 72


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.309    0.128    0.329 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,749
Number of Sequences: 317
Number of extensions: 352
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 56
length of database: 114,650
effective HSP length: 36
effective length of query: 20
effective length of database: 103,238
effective search space:  2064760
effective search space used:  2064760
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.1 bits)
S2: 34 (17.8 bits)