Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000443-TA|BGIBMGA000443-PA|undefined
(56 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 29 0.056
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 26 0.52
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 26 0.69
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 24 2.8
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 24 2.8
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 23 4.8
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 23 6.4
SPAC12B10.07 |acp1||F-actin capping protein alpha subunit|Schizo... 23 6.4
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 22 8.5
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 22 8.5
SPAC22G7.03 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 22 8.5
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 22 8.5
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 29.5 bits (63), Expect = 0.056
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 2 EDYRRKEVETAGLEETSVSIEMLQLYEETKYTLL--SISSGNNRYLAINGTIPSNI 55
E Y++ E +T L + +VS+E Y ET+ T L +++S N+ +L + I N+
Sbjct: 92 ESYKKLEEKTEHLSDDNVSLEKRVEYLETENTKLVKTLNSLNSEFLQLLRKIAINV 147
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 26.2 bits (55), Expect = 0.52
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 9 VETAGLEETSVSIEMLQLYEETKYTLLSISSGNNRYLAINGTIPSN 54
VETA ET+ S + + Y T L + S NR N T S+
Sbjct: 604 VETAKQAETTASSDSFRKYANTLNDLRHLKSSRNRKATSNETQSSS 649
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.8 bits (54), Expect = 0.69
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 1 MEDYRRKEVETAGLEETSVSIEMLQLYEETKYTLLSI 37
+E +RK+ ET + T+V+ ++ Q Y E+K + S+
Sbjct: 546 LEIEKRKKYETNEAKITTVATDLSQYYRESKEYIASL 582
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 23.8 bits (49), Expect = 2.8
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 7 KEVETAGLEE-TSVSIEMLQLYEETKYTLLSISSGNNRYLAIN 48
+E+ T + S S + L+++EE +L+ NN+Y+ I+
Sbjct: 609 QEIITLNMSHLVSSSNQKLRIWEEKILMILNSRDSNNKYMLIS 651
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 23.8 bits (49), Expect = 2.8
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 7 KEVETAGLEETSVSIEMLQLYEETKYTLLSISSGNNRYLAINGTIPSNI 55
++++ L+ S S++ LQL E + + L S + + I+G IP++I
Sbjct: 1281 RKIDNKLLKTISKSLDALQLTVEEELSNLYSLSKDLSFTDISGHIPNSI 1329
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 23.0 bits (47), Expect = 4.8
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 22 EMLQLYEETKYTLLSISSGNNRYLAING 49
+ QLYE LS NN + ++NG
Sbjct: 1306 QQFQLYENFDRLSLSTIMSNNSFTSLNG 1333
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 22.6 bits (46), Expect = 6.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 34 LLSISSGNNRYLAINGTIPS 53
LLS S+ NN+ L+++ T PS
Sbjct: 324 LLSTSNLNNKPLSLSSTAPS 343
>SPAC12B10.07 |acp1||F-actin capping protein alpha
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 256
Score = 22.6 bits (46), Expect = 6.4
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 8 EVETAGLEETSVSIEMLQLYEETKYTLLSISSGNNRYLAINGTIPSN 54
++ GL + E L+LY E + +SIS ++ + + N
Sbjct: 24 DIRDIGLSDEEAIHEQLKLYHEDYNSSVSISDDEKVIISADNRLEGN 70
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 22.2 bits (45), Expect = 8.5
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 2 EDYRRKEVETAGLEETSVSIEMLQLYEETKYTLLSISSG 40
E Y + V E +VS+ L L +T+ LL ++ G
Sbjct: 1221 EKYIPRVVRIGNPETINVSVRDLSLEYQTEKQLLEVNQG 1259
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 22.2 bits (45), Expect = 8.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 4 YRRKEVETAGLEETS 18
Y RK++E LEETS
Sbjct: 832 YLRKQIERTKLEETS 846
>SPAC22G7.03 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 22.2 bits (45), Expect = 8.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 10 ETAGLEETSVSIEMLQLYEETKYTL 34
ET GL+E IE + + E+T+ T+
Sbjct: 156 ETGGLQERIPIIEDISINEDTQRTV 180
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 22.2 bits (45), Expect = 8.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 18 SVSIEMLQLYEETKYTLL 35
+VSI + ++ EET Y LL
Sbjct: 151 TVSISLAEIIEETPYDLL 168
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.128 0.329
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,132
Number of Sequences: 5004
Number of extensions: 6987
Number of successful extensions: 24
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 12
length of query: 56
length of database: 2,362,478
effective HSP length: 37
effective length of query: 19
effective length of database: 2,177,330
effective search space: 41369270
effective search space used: 41369270
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 45 (22.2 bits)
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