Silkworm BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000442-TA|BGIBMGA000442-PA|IPR000863|Sulfotransferase
         (825 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g44542.1 68414.m05118 cyclase family protein contains Pfam pr...    35   0.25 
At3g20960.1 68416.m02649 cytochrome P450 family protein similar ...    34   0.33 
At5g12020.1 68418.m01405 17.6 kDa  class II heat shock protein (...    34   0.44 
At5g12030.1 68418.m01406 17.7 kDa class II heat shock protein 17...    31   4.1  
At5g54510.1 68418.m06787 auxin-responsive GH3 protein, putative ...    29   9.5  

>At1g44542.1 68414.m05118 cyclase family protein contains Pfam
           profile: PF04199 putative cyclase
          Length = 271

 Score = 34.7 bits (76), Expect = 0.25
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 302 LNKQFALEHGIPT-NSCYSVSP-HHSGVYPVHEPLYEAWRKVWDVKVTSTEEYP 353
           +N  FA++   P+  + +SV+   H  V P+H  +Y+  RK++D+    T E P
Sbjct: 16  INITFAVDEAFPSIPTTFSVATKQHYDVKPIHHEVYDGERKIYDISHQYTPELP 69


>At3g20960.1 68416.m02649 cytochrome P450 family protein similar to
           Cytochrome P450 93A1 (SP:Q42798)  {Glycine max};
          Length = 418

 Score = 34.3 bits (75), Expect = 0.33
 Identities = 21/84 (25%), Positives = 39/84 (46%)

Query: 667 IDGSMLRSEPAVVMNTLQKFLKISPHIDYNKLLKIAITERGELYRLGRFEKMGNVIIERL 726
           ID S++     VV      +LK    I   KLL+  + ER    R    +++ N I+++ 
Sbjct: 11  IDESLVFGSSGVVYAPYGDYLKFVKKIIATKLLRPQVLERSRGLRAEELQRLYNRILDKA 70

Query: 727 YGLEVANVGRRSLVRINNVRTRFA 750
              E   +G+ + + +NN+  R +
Sbjct: 71  KMNENVEIGKEATMLMNNIFCRMS 94


>At5g12020.1 68418.m01405 17.6 kDa  class II heat shock protein
           (HSP17.6-CII) identical to 17.6 kDa class II heat shock
           protein SP:P29830 from [Arabidopsis thaliana]
          Length = 155

 Score = 33.9 bits (74), Expect = 0.44
 Identities = 15/43 (34%), Positives = 25/43 (58%)

Query: 763 LVGGEKTKCLGKSKGRVYPPMEERSAKFLRRYYTPHNTALSKL 805
           +V GE+ +   +++G  Y  ME R  KF+R++  P N  L K+
Sbjct: 81  VVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKI 123


>At5g12030.1 68418.m01406 17.7 kDa class II heat shock protein 17.6A
           (HSP17.7-CII) identical to heat shock protein 17.6A
           GI:3256075 from [Arabidopsis thaliana]
          Length = 156

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 13/43 (30%), Positives = 25/43 (58%)

Query: 763 LVGGEKTKCLGKSKGRVYPPMEERSAKFLRRYYTPHNTALSKL 805
           +V G++ +   +++G  +  ME R  KF+R++  P N  L K+
Sbjct: 82  VVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKI 124


>At5g54510.1 68418.m06787 auxin-responsive GH3 protein, putative
           (DFL-1) identical to auxin-responsive GH3 homologue
           [Arabidopsis thaliana] GI:11041726; similar to
           auxin-responsive GH3 product [Glycine max] GI:18591;
           contains Pfam profile PF03321: GH3 auxin-responsive
           promoter
          Length = 612

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 380 FTHTLLLERYPGGRHRLDRSIQGGELFQTVINNPINVFMTHMSNYGNDRLALYTFE 435
           F H + +  Y   +  ++R I  G+  Q + +NPI+ F+T     G +R  + T E
Sbjct: 70  FKHIMPVVTYEDIQPEINR-IANGDKSQVLCSNPISEFLTSSGTSGGERKLMPTIE 124


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.321    0.137    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,831,894
Number of Sequences: 28952
Number of extensions: 929214
Number of successful extensions: 1884
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1879
Number of HSP's gapped (non-prelim): 5
length of query: 825
length of database: 12,070,560
effective HSP length: 87
effective length of query: 738
effective length of database: 9,551,736
effective search space: 7049181168
effective search space used: 7049181168
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)