Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000441-TA|BGIBMGA000441-PA|undefined
         (153 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   2.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   2.0  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 47  GVMLLSVLTILFYSYYVTIPLTSLVWRDRIPRPL 80
           GV L  VL   +Y YYV     S V    I  P+
Sbjct: 260 GVSLFDVLFQAYYLYYVATGKASFVTVPMIVCPI 293


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 47  GVMLLSVLTILFYSYYVTIPLTSLVWRDRIPRPL 80
           GV L  VL   +Y YYV     S V    I  P+
Sbjct: 260 GVSLFDVLFQAYYLYYVATGKASFVTVPMIVCPI 293


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.140    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,385
Number of Sequences: 317
Number of extensions: 914
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 153
length of database: 114,650
effective HSP length: 52
effective length of query: 101
effective length of database: 98,166
effective search space:  9914766
effective search space used:  9914766
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 40 (20.2 bits)