Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000441-TA|BGIBMGA000441-PA|undefined
(153 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52849 Cluster: Bifunctional heparan sulfate N-deacetyl... 38 0.095
UniRef50_O95803-2 Cluster: Isoform 2 of O95803 ; n=1; Homo sapie... 33 2.1
UniRef50_Q3UHN9-3 Cluster: Isoform 3 of Q3UHN9 ; n=3; Murinae|Re... 33 3.6
UniRef50_P52848 Cluster: Bifunctional heparan sulfate N-deacetyl... 33 3.6
UniRef50_Q03ZS8 Cluster: Predicted membrane protein; n=3; Leucon... 31 8.3
UniRef50_Q585F8 Cluster: Putative uncharacterized protein; n=1; ... 31 8.3
>UniRef50_P52849 Cluster: Bifunctional heparan sulfate
N-deacetylase/N-sulfotransferase 2 (EC 2.8.2.8)
(Glucosaminyl N-deacetylase/N-sulfotransferase 2) (NDST-
2) (N-heparan sulfate sulfotransferase 2) (N-HSST 2)
[Includes: Heparan sulfate N-deacetylase 2 (EC 3.-.-.-);
Heparan sulfate N- sulfotransferase 2 (EC 2.8.2.-)];
n=60; Euteleostomi|Rep: Bifunctional heparan sulfate
N-deacetylase/N-sulfotransferase 2 (EC 2.8.2.8)
(Glucosaminyl N-deacetylase/N-sulfotransferase 2) (NDST-
2) (N-heparan sulfate sulfotransferase 2) (N-HSST 2)
[Includes: Heparan sulfate N-deacetylase 2 (EC 3.-.-.-);
Heparan sulfate N- sulfotransferase 2 (EC 2.8.2.-)] -
Homo sapiens (Human)
Length = 883
Score = 37.9 bits (84), Expect = 0.095
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 36 ASHVNVRKCVAGVMLLSVLTILFYSYYVTIPLTSLVWRDRIPRPLTQCXXXXXXXXXX-- 93
A + + + + ++ S+ ++ F +YYV+ TS ++ +P PL C
Sbjct: 11 ARQLELHRLILLLIAFSLGSMGFLAYYVS---TSPKAKEPLPLPLGDCSSGGAAGPGPAR 67
Query: 94 -----RDHRSDARLRIDAKVLVIVESAYSRLGRDIAELLVANR 131
R R R + VLV VESAYS+LG++I +L ++R
Sbjct: 68 PPVPPRPPRPPETARTEPVVLVFVESAYSQLGQEIVAILESSR 110
>UniRef50_O95803-2 Cluster: Isoform 2 of O95803 ; n=1; Homo
sapiens|Rep: Isoform 2 of O95803 - Homo sapiens (Human)
Length = 385
Score = 33.5 bits (73), Expect = 2.1
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 103 RIDAKVLVIVESAYSRLGRDIAELLVANRISLIYKLFYAP 142
R D VLV VES YS LG+DI +L ++R Y + AP
Sbjct: 75 RTDPTVLVFVESQYSSLGQDIIMILESSRFQ--YHIEIAP 112
>UniRef50_Q3UHN9-3 Cluster: Isoform 3 of Q3UHN9 ; n=3; Murinae|Rep:
Isoform 3 of Q3UHN9 - Mus musculus (Mouse)
Length = 185
Score = 32.7 bits (71), Expect = 3.6
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 103 RIDAKVLVIVESAYSRLGRDIAELLVANRISLIYKLFYAP 142
R D VLV VES YS+LG+++ +L ++R Y+ AP
Sbjct: 80 RTDPLVLVFVESLYSQLGQEVVAILESSRFK--YRTEIAP 117
>UniRef50_P52848 Cluster: Bifunctional heparan sulfate
N-deacetylase/N-sulfotransferase 1 (EC 2.8.2.8)
(Glucosaminyl N-deacetylase/N-sulfotransferase 1) (NDST-
1) ([Heparan sulfate]-glucosamine N-sulfotransferase 1)
(HSNST 1) (N- heparan sulfate sulfotransferase 1)
(N-HSST 1) [Includes: Heparan sulfate N-deacetylase 1
(EC 3.-.-.-); Heparan sulfate N- sulfotransferase 1 (EC
2.8.2.-)]; n=42; Coelomata|Rep: Bifunctional heparan
sulfate N-deacetylase/N-sulfotransferase 1 (EC 2.8.2.8)
(Glucosaminyl N-deacetylase/N-sulfotransferase 1) (NDST-
1) ([Heparan sulfate]-glucosamine N-sulfotransferase 1)
(HSNST 1) (N- heparan sulfate sulfotransferase 1)
(N-HSST 1) [Includes: Heparan sulfate N-deacetylase 1
(EC 3.-.-.-); Heparan sulfate N- sulfotransferase 1 (EC
2.8.2.-)] - Homo sapiens (Human)
Length = 882
Score = 32.7 bits (71), Expect = 3.6
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 103 RIDAKVLVIVESAYSRLGRDIAELLVANRISLIYKLFYAP 142
R D VLV VES YS+LG+++ +L ++R Y+ AP
Sbjct: 80 RTDPLVLVFVESLYSQLGQEVVAILESSRFK--YRTEIAP 117
>UniRef50_Q03ZS8 Cluster: Predicted membrane protein; n=3;
Leuconostocaceae|Rep: Predicted membrane protein -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 227
Score = 31.5 bits (68), Expect = 8.3
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 34 WLASHVNVRKCVAGV---MLLSVLTILFYSYYVTIPLTSLVWRDRIPRPL 80
WLA +N + + + M S+L +F +Y+V++ + L W RIP L
Sbjct: 76 WLAMRINWLRLLGNIFFGMAFSILVGVFANYFVSLGIRQLSWWWRIPLDL 125
>UniRef50_Q585F8 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized
protein - Trypanosoma brucei
Length = 536
Score = 31.5 bits (68), Expect = 8.3
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 30 RCCFWLASHVNVRKCVAGVMLLSVLTILFY 59
+CC W H++VR+C+ + +L+ + ++
Sbjct: 4 QCCLWWLDHLSVRRCITPLFVLNEIKTAYF 33
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.326 0.140 0.441
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,603,011
Number of Sequences: 1657284
Number of extensions: 4839824
Number of successful extensions: 12074
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12069
Number of HSP's gapped (non-prelim): 6
length of query: 153
length of database: 575,637,011
effective HSP length: 94
effective length of query: 59
effective length of database: 419,852,315
effective search space: 24771286585
effective search space used: 24771286585
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 68 (31.5 bits)
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