GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000441-TA|BGIBMGA000441-PA|undefined
         (153 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF175689-1|AAD51842.1| 1048|Drosophila melanogaster heparan sulf...    91   5e-19
AE014296-1120|AAF50658.1| 1048|Drosophila melanogaster CG8339-PA...    91   5e-19
BT023217-1|AAY55633.1|  199|Drosophila melanogaster IP02947p pro...    33   0.22 
DQ139958-1|ABA06529.1|  309|Drosophila melanogaster TipE-like pr...    28   6.3  
AE014296-784|AAF47854.1|  309|Drosophila melanogaster CG15004-PA...    28   6.3  
AY118764-1|AAM50624.1|  425|Drosophila melanogaster GH09876p pro...    27   8.3  
AE014134-3010|AAF53735.2|  425|Drosophila melanogaster CG10650-P...    27   8.3  

>AF175689-1|AAD51842.1| 1048|Drosophila melanogaster heparan sulfate
           N-deacetylase/N-sulfotransferase homolog protein.
          Length = 1048

 Score = 91.5 bits (217), Expect = 5e-19
 Identities = 53/118 (44%), Positives = 71/118 (60%), Gaps = 12/118 (10%)

Query: 31  CCFWLASH---VNVRKCVAGVMLLSVLTILFYSYYV-TIPLTSLVWRDRIPRPLTQCXXX 86
           CC  +A     +NVR+CV  ++ +++++I +Y++YV T     L+ RD  P P+  C   
Sbjct: 157 CCNLIARRCFGINVRRCVLALLAITMVSIFYYTHYVDTGVFNGLIQRDTHPAPIINCRMI 216

Query: 87  XXXXXXXR------DHRSDARLRIDAKVLVIVESAYSRLGRDIAELLVANRISLIYKL 138
                  R      DHRS+ARLRID KVLV VE+ YS LGRDIAELLV NRI   YK+
Sbjct: 217 NSGGKHIRNASPAPDHRSEARLRIDPKVLVFVETTYSGLGRDIAELLVYNRIK--YKI 272


>AE014296-1120|AAF50658.1| 1048|Drosophila melanogaster CG8339-PA
           protein.
          Length = 1048

 Score = 91.5 bits (217), Expect = 5e-19
 Identities = 53/118 (44%), Positives = 71/118 (60%), Gaps = 12/118 (10%)

Query: 31  CCFWLASH---VNVRKCVAGVMLLSVLTILFYSYYV-TIPLTSLVWRDRIPRPLTQCXXX 86
           CC  +A     +NVR+CV  ++ +++++I +Y++YV T     L+ RD  P P+  C   
Sbjct: 157 CCNLIARRCFGINVRRCVLALLAITMVSIFYYTHYVDTGVFNGLIQRDTHPAPIINCRMI 216

Query: 87  XXXXXXXR------DHRSDARLRIDAKVLVIVESAYSRLGRDIAELLVANRISLIYKL 138
                  R      DHRS+ARLRID KVLV VE+ YS LGRDIAELLV NRI   YK+
Sbjct: 217 NSGGKHIRNASPAPDHRSEARLRIDPKVLVFVETTYSGLGRDIAELLVYNRIK--YKI 272


>BT023217-1|AAY55633.1|  199|Drosophila melanogaster IP02947p
           protein.
          Length = 199

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 12/36 (33%), Positives = 25/36 (69%), Gaps = 3/36 (8%)

Query: 31  CCFWLASH---VNVRKCVAGVMLLSVLTILFYSYYV 63
           CC  +A     +NVR+CV  ++ +++++I +Y++YV
Sbjct: 157 CCNLIARRCFGINVRRCVLALLAITMVSIFYYTHYV 192


>DQ139958-1|ABA06529.1|  309|Drosophila melanogaster TipE-like
           protein 2 protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 44  CVAGVMLLSVLTILFYSYYVTIPLTSLVWRDRIPRPLT 81
           C+    +LSV T LF   +V  P  S +  D  P P+T
Sbjct: 91  CLGTTAILSVFTFLFLIPFVVDPAISTIIADYDPVPVT 128


>AE014296-784|AAF47854.1|  309|Drosophila melanogaster CG15004-PA
           protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 44  CVAGVMLLSVLTILFYSYYVTIPLTSLVWRDRIPRPLT 81
           C+    +LSV T LF   +V  P  S +  D  P P+T
Sbjct: 91  CLGTTAILSVFTFLFLIPFVVDPAISTIIADYDPVPVT 128


>AY118764-1|AAM50624.1|  425|Drosophila melanogaster GH09876p
           protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 11  PLLECGSGE-YSHNHKTLAPRCCFWLASHVNVRKCVAGV 48
           PL+ C +G  YS     L  R CF  ASH+   +C A V
Sbjct: 343 PLINCPNGTCYSGVWNELGVRGCFTAASHLMQYQCNAKV 381


>AE014134-3010|AAF53735.2|  425|Drosophila melanogaster CG10650-PA
           protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 11  PLLECGSGE-YSHNHKTLAPRCCFWLASHVNVRKCVAGV 48
           PL+ C +G  YS     L  R CF  ASH+   +C A V
Sbjct: 343 PLINCPNGTCYSGVWNELGVRGCFTAASHLMQYQCNAKV 381


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.326    0.140    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,597,815
Number of Sequences: 52641
Number of extensions: 210730
Number of successful extensions: 493
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 486
Number of HSP's gapped (non-prelim): 7
length of query: 153
length of database: 24,830,863
effective HSP length: 79
effective length of query: 74
effective length of database: 20,672,224
effective search space: 1529744576
effective search space used: 1529744576
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 58 (27.5 bits)