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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000440-TA|BGIBMGA000440-PA|IPR010729|Ribosomal protein
L47, mitochondrial, IPR001854|Ribosomal protein L29
         (240 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032522-1|AAH32522.1|  230|Homo sapiens MRPL47 protein protein.      133   5e-31
AF285120-1|AAG01157.1|  252|Homo sapiens CGI-204 protein.             132   1e-30
BC021575-1|AAH21575.1|  140|Homo sapiens mitochondrial ribosomal...    60   5e-09
AY212270-1|AAO92749.1|  140|Homo sapiens nasopharyngeal carcinom...    60   5e-09
BC036530-1|AAH36530.1|  554|Homo sapiens similar to hypothetical...    35   0.22 
BC018938-1|AAH18938.3|  256|Homo sapiens NSMCE1 protein protein.       32   1.6  
J03069-1|AAA59883.1|  357|Homo sapiens MYCL2 protein.                  32   2.1  
AC004081-1|AAB97938.1|  358|Homo sapiens WUGSC:H_DJ0320J15.1 pro...    32   2.1  
D31888-1|BAA06686.1|  396|Homo sapiens KIAA0071 protein.               31   2.7  
AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.       31   2.7  
U94190-1|AAC15791.1| 1663|Homo sapiens Duo protein.                    31   3.6  
BC051733-1|AAH51733.1| 1026|Homo sapiens LUZP1 protein protein.        31   3.6  
AL031428-1|CAI19705.1| 1026|Homo sapiens leucine zipper protein ...    31   3.6  
AK074153-1|BAB84979.1| 1046|Homo sapiens FLJ00226 protein protein.     31   3.6  
BC112275-1|AAI12276.1| 1011|Homo sapiens hypothetical protein LO...    31   4.7  
BC103894-1|AAI03895.1|  266|Homo sapiens MAGEC3 protein protein.       31   4.7  
BC103893-1|AAI03894.1|  346|Homo sapiens MAGEC3 protein protein.       31   4.7  
BC101628-1|AAI01629.1| 1011|Homo sapiens family with sequence si...    31   4.7  
AL512363-1|CAI15113.1| 1011|Homo sapiens protein ( Human DNA seq...    31   4.7  
AL049555-1|CAI21667.1| 1011|Homo sapiens protein ( Human DNA seq...    31   4.7  
AK055204-1|BAB70873.1|  811|Homo sapiens protein ( Homo sapiens ...    31   4.7  
BC141824-1|AAI41825.1|  841|Homo sapiens Unknown (protein for MG...    30   8.3  

>BC032522-1|AAH32522.1|  230|Homo sapiens MRPL47 protein protein.
          Length = 230

 Score =  133 bits (322), Expect = 5e-31
 Identities = 78/209 (37%), Positives = 112/209 (53%), Gaps = 4/209 (1%)

Query: 1   MRSQKSINTAAACIVKRDFHTTKPTQDLMEFFDAKKNWPETNIRVGRAWKLDELRLKSNT 60
           ++S +S+ T          HTT   + L EFFD  KNW +  ++ G AW   +LR KSN 
Sbjct: 17  LKSSRSLITPQVPACTGLLHTTLSRKGLEEFFDDPKNWGQEKVKSGAAWTCQQLRNKSNE 76

Query: 61  DLHKLWYVLLKERNMLYTMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKL 120
           DLHKLWYVLLKERNML T+E E   +    P+PER+DKV +SM+ ++ V++ER  A   L
Sbjct: 77  DLHKLWYVLLKERNMLLTLEQEAKRQRLPMPSPERLDKVVDSMDALDKVVQEREDALRLL 136

Query: 121 ETGETGERPVKDVINLIGMPEEYQPSEYDTPKFMNTRWVRPYLKHGFINSLAVKKFRRLY 180
           +TG+   RP     ++ G    ++  ++  P  +N R    Y +  F     V  F RL 
Sbjct: 137 QTGQERARPGAWRRDIFGRIIWHKFKQWVIPWHLNKR----YNRKRFFALPYVDHFLRLE 192

Query: 181 NEKIHSEVRKAHNRDFNHVQHLLKRFPNL 209
            EK      +  N +    + LLK+FP+L
Sbjct: 193 REKRARIKARKENLERKKAKILLKKFPHL 221


>AF285120-1|AAG01157.1|  252|Homo sapiens CGI-204 protein.
          Length = 252

 Score =  132 bits (319), Expect = 1e-30
 Identities = 76/193 (39%), Positives = 106/193 (54%), Gaps = 4/193 (2%)

Query: 17  RDFHTTKPTQDLMEFFDAKKNWPETNIRVGRAWKLDELRLKSNTDLHKLWYVLLKERNML 76
           R  HTT   + L EFFD  KNW +  ++ G AW   +LR KSN DLHKLWYVLLKERNML
Sbjct: 55  RLLHTTLSRKGLEEFFDDPKNWGQEKVKSGAAWTCQQLRNKSNEDLHKLWYVLLKERNML 114

Query: 77  YTMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKLETGETGERPVKDVINL 136
            T+E E   +    P+PER+DKV +SM+ ++ V++ER  A   L+TG+   RP     ++
Sbjct: 115 LTLEQEAKRQRLPMPSPERLDKVVDSMDALDKVVQEREDALRLLQTGQERARPGAWRRDI 174

Query: 137 IGMPEEYQPSEYDTPKFMNTRWVRPYLKHGFINSLAVKKFRRLYNEKIHSEVRKAHNRDF 196
            G    ++  ++  P  +N R    Y +  F     V  F RL  EK      +  N + 
Sbjct: 175 FGRIIWHKFKQWVIPWHLNKR----YNRKRFFALPYVDHFLRLEREKRARIKARKENLER 230

Query: 197 NHVQHLLKRFPNL 209
              + LLK+FP+L
Sbjct: 231 KKAKILLKKFPHL 243


>BC021575-1|AAH21575.1|  140|Homo sapiens mitochondrial ribosomal
           protein L47 protein.
          Length = 140

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 4/135 (2%)

Query: 75  MLYTMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKLETGETGERPVKDVI 134
           ML T+E E   +    P+PER+DKV +SM+ ++ V++ER  A   L+TG+   RP     
Sbjct: 1   MLLTLEQEAKRQRLPMPSPERLDKVVDSMDALDKVVQEREDALRLLQTGQERARPGAWRR 60

Query: 135 NLIGMPEEYQPSEYDTPKFMNTRWVRPYLKHGFINSLAVKKFRRLYNEKIHSEVRKAHNR 194
           ++ G    ++  ++  P  +N R    Y +  F     V  F RL  EK      +  N 
Sbjct: 61  DIFGRIIWHKFKQWVIPWHLNKR----YNRKRFFALPYVDHFLRLEREKRARIKARKENL 116

Query: 195 DFNHVQHLLKRFPNL 209
           +    + LLK+FP+L
Sbjct: 117 ERKKAKILLKKFPHL 131


>AY212270-1|AAO92749.1|  140|Homo sapiens nasopharyngeal carcinoma
           metastasis-related 1 protein.
          Length = 140

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 4/135 (2%)

Query: 75  MLYTMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKLETGETGERPVKDVI 134
           ML T+E E   +    P+PER+DKV +SM+ ++ V++ER  A   L+TG+   RP     
Sbjct: 1   MLLTLEQEAKRQRLPMPSPERLDKVVDSMDALDKVVQEREDALRLLQTGQERARPGAWRR 60

Query: 135 NLIGMPEEYQPSEYDTPKFMNTRWVRPYLKHGFINSLAVKKFRRLYNEKIHSEVRKAHNR 194
           ++ G    ++  ++  P  +N R    Y +  F     V  F RL  EK      +  N 
Sbjct: 61  DIFGRIIWHKFKQWVIPWHLNKR----YNRKRFFALPYVDHFLRLEREKRARIKARKENL 116

Query: 195 DFNHVQHLLKRFPNL 209
           +    + LLK+FP+L
Sbjct: 117 ERKKAKILLKKFPHL 131


>BC036530-1|AAH36530.1|  554|Homo sapiens similar to hypothetical
           protein protein.
          Length = 554

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 70  LKERNMLYTMEHE-CNERVRLFPNPERIDKVEESMNNIESVIRERNIAYYKLETGETGER 128
           L E + L T+E E C + V +   PE I KVE  M N + + +E+ +        + GE+
Sbjct: 476 LPEEDRLETVERELCEQNVEVMLTPEMI-KVEFPMLNYKDIRKEKEVKDQAQPAEKAGEK 534

Query: 129 PVKDVINLIG 138
            ++++ NL G
Sbjct: 535 LLEEMRNLRG 544


>BC018938-1|AAH18938.3|  256|Homo sapiens NSMCE1 protein protein.
          Length = 256

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 3/79 (3%)

Query: 60  TDLHKLWYVLLKERNML--YTMEHECNERVRLFPNPERIDKVEESMNNIESVIRERNIAY 117
           TD+H+ +  LL    +L  + ++       ++      +DK+E+ +NNI SV+    I  
Sbjct: 2   TDVHRRFLQLLMTHGVLEEWDVKRLQTHCYKVHDRSATVDKLEDFINNINSVLESLYIEI 61

Query: 118 YKLETGETGERPVKDVINL 136
            +  T + G RP+  ++NL
Sbjct: 62  KRGVTEDDG-RPIYALVNL 79


>J03069-1|AAA59883.1|  357|Homo sapiens MYCL2 protein.
          Length = 357

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 105 NIESVIRERNIAYYKLETGETGERPVKDVINLIGMPEEYQPSEYDTPKF 153
           N  S+IR R+  +    T E  ER V D++  +G P  Y P E+ TP +
Sbjct: 79  NYASLIR-RDCMWSGFSTQEPLERAVSDLL-AVGAPSGYSPKEFATPDY 125


>AC004081-1|AAB97938.1|  358|Homo sapiens WUGSC:H_DJ0320J15.1
           protein.
          Length = 358

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 105 NIESVIRERNIAYYKLETGETGERPVKDVINLIGMPEEYQPSEYDTPKF 153
           N  S+IR R+  +    T E  ER V D++  +G P  Y P E+ TP +
Sbjct: 80  NYASLIR-RDCMWSGFSTQEPLERAVSDLL-AVGAPSGYSPKEFATPDY 126


>D31888-1|BAA06686.1|  396|Homo sapiens KIAA0071 protein.
          Length = 396

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)

Query: 105 NIESVIRERNIAYYKLET-GETGERPVKDVINLIGMPEE 142
           NI+ V++E    + K ET G + ++PVK   N I MPEE
Sbjct: 343 NIDEVLQEWEAEHGKEETNGPSNQKPVKSPDNSIKMPEE 381


>AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.
          Length = 482

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)

Query: 105 NIESVIRERNIAYYKLET-GETGERPVKDVINLIGMPEE 142
           NI+ V++E    + K ET G + ++PVK   N I MPEE
Sbjct: 429 NIDEVLQEWEAEHGKEETNGPSNQKPVKSPDNSIKMPEE 467


>U94190-1|AAC15791.1| 1663|Homo sapiens Duo protein.
          Length = 1663

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 180 YNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDMDTLKAEYPNVDIEKAKR 228
           YN +   E+R +    FN   HLL R  +L     + E+P VD+E ++R
Sbjct: 178 YNHEEWIELRLSLEEFFNSAVHLLSRLEDLQEMLARKEFP-VDVEGSRR 225


>BC051733-1|AAH51733.1| 1026|Homo sapiens LUZP1 protein protein.
          Length = 1026

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 44/207 (21%), Positives = 94/207 (45%), Gaps = 17/207 (8%)

Query: 44  RVGRAWKLDELRLKSNTDLHKLWYVLLKERNMLYTMEHECNE-RVR---LFPNPERIDKV 99
           R+    KL+E   +S  D  +L   L +ERN+   +  E    RV+   L  + +R+DK 
Sbjct: 116 RMAELEKLEEAFSRSKNDCTQLCLSLNEERNLTKKISSELEMLRVKVKELESSEDRLDKT 175

Query: 100 EESMNNIESVIRERNIAY-----YKLETGETGERPVKDVINLIGMPEEYQPSEYDTPKFM 154
           E+S+ +    ++   +++     Y  E  +  E+ +K++   +   ++    +Y T    
Sbjct: 176 EQSLASELEKLKSLTLSFVSERKYLNEKEKENEKLIKELTQKLEQNKKMN-RDY-TRNAS 233

Query: 155 NTRWVRPYLKHGFINSLAVKKFRRL----YNEKIHSEVRKAHNRDFNHVQHLLK-RFPNL 209
           N       ++ G  ++L  K+ RR     Y +++ +E R     + N  Q   K +  N 
Sbjct: 234 NLERNDLRIEDGISSTLPSKESRRKGGLDYLKQVENETRNKSENEKNRNQEDNKVKDLNQ 293

Query: 210 DMDTLKAEYPNVD-IEKAKRTKKSRGH 235
           +++ LK +  + + +E+  +  KS+ +
Sbjct: 294 EIEKLKTQIKHFESLEEELKKMKSKNN 320


>AL031428-1|CAI19705.1| 1026|Homo sapiens leucine zipper protein 1
           protein.
          Length = 1026

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 44/207 (21%), Positives = 94/207 (45%), Gaps = 17/207 (8%)

Query: 44  RVGRAWKLDELRLKSNTDLHKLWYVLLKERNMLYTMEHECNE-RVR---LFPNPERIDKV 99
           R+    KL+E   +S  D  +L   L +ERN+   +  E    RV+   L  + +R+DK 
Sbjct: 116 RMAELEKLEEAFSRSKNDCTQLCLSLNEERNLTKKISSELEMLRVKVKELESSEDRLDKT 175

Query: 100 EESMNNIESVIRERNIAY-----YKLETGETGERPVKDVINLIGMPEEYQPSEYDTPKFM 154
           E+S+ +    ++   +++     Y  E  +  E+ +K++   +   ++    +Y T    
Sbjct: 176 EQSLASELEKLKSLTLSFVSERKYLNEKEKENEKLIKELTQKLEQNKKMN-RDY-TRNAS 233

Query: 155 NTRWVRPYLKHGFINSLAVKKFRRL----YNEKIHSEVRKAHNRDFNHVQHLLK-RFPNL 209
           N       ++ G  ++L  K+ RR     Y +++ +E R     + N  Q   K +  N 
Sbjct: 234 NLERNDLRIEDGISSTLPSKESRRKGGLDYLKQVENETRNKSENEKNRNQEDNKVKDLNQ 293

Query: 210 DMDTLKAEYPNVD-IEKAKRTKKSRGH 235
           +++ LK +  + + +E+  +  KS+ +
Sbjct: 294 EIEKLKTQIKHFESLEEELKKMKSKNN 320


>AK074153-1|BAB84979.1| 1046|Homo sapiens FLJ00226 protein protein.
          Length = 1046

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 44/207 (21%), Positives = 94/207 (45%), Gaps = 17/207 (8%)

Query: 44  RVGRAWKLDELRLKSNTDLHKLWYVLLKERNMLYTMEHECNE-RVR---LFPNPERIDKV 99
           R+    KL+E   +S  D  +L   L +ERN+   +  E    RV+   L  + +R+DK 
Sbjct: 109 RMAELEKLEEAFSRSKNDCTQLCLSLNEERNLTKKISSELEMLRVKVKELESSEDRLDKT 168

Query: 100 EESMNNIESVIRERNIAY-----YKLETGETGERPVKDVINLIGMPEEYQPSEYDTPKFM 154
           E+S+ +    ++   +++     Y  E  +  E+ +K++   +   ++    +Y T    
Sbjct: 169 EQSLASELEKLKSLTLSFVSERKYLNEKEKENEKLIKELTQKLEQNKKMN-RDY-TRNAS 226

Query: 155 NTRWVRPYLKHGFINSLAVKKFRRL----YNEKIHSEVRKAHNRDFNHVQHLLK-RFPNL 209
           N       ++ G  ++L  K+ RR     Y +++ +E R     + N  Q   K +  N 
Sbjct: 227 NLERNDLRIEDGISSTLPSKESRRKGGLDYLKQVENETRNKSENEKNRNQEDNKVKDLNQ 286

Query: 210 DMDTLKAEYPNVD-IEKAKRTKKSRGH 235
           +++ LK +  + + +E+  +  KS+ +
Sbjct: 287 EIEKLKTQIKHFESLEEELKKMKSKNN 313


>BC112275-1|AAI12276.1| 1011|Homo sapiens hypothetical protein
           LOC222584 protein.
          Length = 1011

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 167 FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDMDT 213
           F N LA +K   L +   +S VR++ N   NH++ L +R P L+  T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488


>BC103894-1|AAI03895.1|  266|Homo sapiens MAGEC3 protein protein.
          Length = 266

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 127 ERPVKDVINLIGMPEEYQPSEYDTP-KFMNTRWV-RPYLKHGFINSLAVKKFRRLYNEKI 184
           E  + +V++ IG+    +   Y  P K +   WV R YL++  + + A  ++  L+  + 
Sbjct: 187 EEVIWEVLSAIGVCAGREHFIYGDPRKLLTIHWVQRKYLEYREVPNSAPPRYEFLWGPRA 246

Query: 185 HSEVRKAHNRDF 196
           HSE  K   R F
Sbjct: 247 HSEASKRSLRVF 258


>BC103893-1|AAI03894.1|  346|Homo sapiens MAGEC3 protein protein.
          Length = 346

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 127 ERPVKDVINLIGMPEEYQPSEYDTP-KFMNTRWV-RPYLKHGFINSLAVKKFRRLYNEKI 184
           E  + +V++ IG+    +   Y  P K +   WV R YL++  + + A  ++  L+  + 
Sbjct: 267 EEVIWEVLSAIGVCAGREHFIYGDPRKLLTIHWVQRKYLEYREVPNSAPPRYEFLWGPRA 326

Query: 185 HSEVRKAHNRDF 196
           HSE  K   R F
Sbjct: 327 HSEASKRSLRVF 338


>BC101628-1|AAI01629.1| 1011|Homo sapiens family with sequence
           similarity 83, member B protein.
          Length = 1011

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 167 FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDMDT 213
           F N LA +K   L +   +S VR++ N   NH++ L +R P L+  T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488


>AL512363-1|CAI15113.1| 1011|Homo sapiens protein ( Human DNA
           sequence from clone RP11-524H19 on chromosome 6. ).
          Length = 1011

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 167 FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDMDT 213
           F N LA +K   L +   +S VR++ N   NH++ L +R P L+  T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488


>AL049555-1|CAI21667.1| 1011|Homo sapiens protein ( Human DNA
           sequence from clone RP3-523K23 on chromosome
           6p12.1-12.3. ).
          Length = 1011

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 167 FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDMDT 213
           F N LA +K   L +   +S VR++ N   NH++ L +R P L+  T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488


>AK055204-1|BAB70873.1|  811|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30642 fis, clone CTONG2002965. ).
          Length = 811

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 167 FINSLAVKKFRRLYNEKIHSEVRKAHNRDFNHVQHLLKRFPNLDMDT 213
           F N LA +K   L +   +S VR++ N   NH++ L +R P L+  T
Sbjct: 444 FANRLAQRKTTNLADR--NSNVRRSFNGTDNHIRFLQQRMPTLEHTT 488


>BC141824-1|AAI41825.1|  841|Homo sapiens Unknown (protein for
           MGC:164928) protein.
          Length = 841

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 7/105 (6%)

Query: 133 VINLIGMPEEYQPSEYDTPKFMNTRWVRP-YLKHGFINSLAVKKFRRLYNEKIHSEVRKA 191
           ++ ++ +P  Y P E D+P  ++T +++   LK+  +    + KF+  +   ++ +    
Sbjct: 75  ILGILQVPAAYVPIEPDSPPSLSTHFMKKCNLKYILVEKKQINKFKSFHETLLNYDTFTV 134

Query: 192 HNRDFNHVQ-HLLKRFPNLDMDTLKAEYPNVDIEKAKRTKKSRGH 235
            + D    + H      NL ++  K +Y     EK KR   S  H
Sbjct: 135 EHNDLVLFRLHWKNTEVNLMLNDGKEKY-----EKEKRKSISSEH 174


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.319    0.134    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,030,035
Number of Sequences: 224733
Number of extensions: 1478048
Number of successful extensions: 3059
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3050
Number of HSP's gapped (non-prelim): 23
length of query: 240
length of database: 73,234,838
effective HSP length: 88
effective length of query: 152
effective length of database: 53,458,334
effective search space: 8125666768
effective search space used: 8125666768
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)

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