GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000440-TA|BGIBMGA000440-PA|IPR010729|Ribosomal protein
L47, mitochondrial, IPR001854|Ribosomal protein L29
         (240 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062199-1|AAL58560.1|  151|Anopheles gambiae cytochrome P450 CY...    27   0.65 
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    25   1.5  
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    25   2.6  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   2.6  
AF515527-1|AAM61894.1|  211|Anopheles gambiae glutathione S-tran...    23   6.1  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    23   8.0  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    23   8.0  
AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding pr...    23   8.0  
AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding pr...    23   8.0  

>AY062199-1|AAL58560.1|  151|Anopheles gambiae cytochrome P450
           CYP4H19 protein.
          Length = 151

 Score = 26.6 bits (56), Expect = 0.65
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)

Query: 182 EKIHSEVRKAHNRDFNHV---QHLLKRFPNLDM 211
           EK+H E++     D+ HV    + L+ FP LDM
Sbjct: 32  EKLHQELQDVLGVDYRHVPLTYNTLQNFPYLDM 64


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 203 LKRFPNLDMDTLKAEYPNVDIEKAK 227
           + R PNLD+DT K  Y  V   K+K
Sbjct: 75  VSRQPNLDLDTGKGNYRTVTQLKSK 99


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 124 ETGERPVKDVINLIGMPEEYQPSEYDTP 151
           +T +RPV D I L  +P E  P +   P
Sbjct: 28  DTDDRPVWDSIRLCDIPNEPNPGQCMLP 55


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 117 YYKLETGETGERPVKDVINLIGMPEEYQPSEYDTPKFMNTR 157
           +++ +    G  P  D I   G+PE  + + ++ P+F   R
Sbjct: 949 FFRDDLCRMGFTPSPDCIRCTGVPETAEHAMFECPRFAEIR 989


>AF515527-1|AAM61894.1|  211|Anopheles gambiae glutathione
           S-transferase D10 protein.
          Length = 211

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 9/32 (28%), Positives = 20/32 (62%)

Query: 82  ECNERVRLFPNPERIDKVEESMNNIESVIRER 113
           EC  + +L P  E   ++++++  +ES ++ER
Sbjct: 113 ECILKKKLEPTEEMQQRLKKALGLLESFVKER 144


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 97  DKVEESMNNIESVIRERNIAYYKLETGETGERPVKDVINLIGMPE-EYQP 145
           DKV   +NN     ++++ A     +G   + P++   N+      +YQP
Sbjct: 129 DKVYRGLNNYTQFFKKKDSAQGNAASGMVRKGPIRAPANIRSTVRWDYQP 178


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 97  DKVEESMNNIESVIRERNIAYYKLETGETGERPVKDVINLIGMPE-EYQP 145
           DKV   +NN     ++++ A     +G   + P++   N+      +YQP
Sbjct: 129 DKVYRGLNNYTQFFKKKDSAQGNAASGMVRKGPIRAPANIRSTVRWDYQP 178


>AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP35 protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 59  NTDLHKLWYVLLKERNMLYTME 80
           NTDL+K +  + K+  M YT +
Sbjct: 256 NTDLYKHFLAVFKDAAMTYTRQ 277


>AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP36 protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 59  NTDLHKLWYVLLKERNMLYTME 80
           NTDL+K +  + K+  M YT +
Sbjct: 256 NTDLYKHFLAVFKDAAMTYTRQ 277


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.134    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 266,245
Number of Sequences: 2123
Number of extensions: 11267
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 10
length of query: 240
length of database: 516,269
effective HSP length: 62
effective length of query: 178
effective length of database: 384,643
effective search space: 68466454
effective search space used: 68466454
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)