GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000439-TA|BGIBMGA000439-PA|IPR001107|Band 7 protein,
IPR001972|Stomatin
         (257 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    25   2.2  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    25   2.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.8  
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    24   3.8  

>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 191 KEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFLGG-AGP 241
           K+  L  +D        +L +L S  A   +++ F +P+DF +  LG   GP
Sbjct: 98  KQVFLGGVDKNTQFWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGP 149


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 191 KEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFLGG-AGP 241
           K+  L  +D        +L +L S  A   +++ F +P+DF +  LG   GP
Sbjct: 98  KQVFLGGVDKNTQFWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGP 149


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 57   FDVPPQEVLTRDSVTVAVDAVVYYRIKEP 85
            F +P Q V  +D+ TVA+  ++Y  +  P
Sbjct: 1660 FGMPKQIVELKDTGTVALQEILYDELNRP 1688



 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 134 LDEATEPWGVEVERVEIKDVRLP 156
           +D  +E W    ER E+KD RLP
Sbjct: 555 MDSGSEHWPFMTERSELKD-RLP 576


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 57   FDVPPQEVLTRDSVTVAVDAVVYYRIKEP 85
            F +P Q V  +D+ TVA+  ++Y  +  P
Sbjct: 1661 FGMPKQIVELKDTGTVALQEILYDELNRP 1689



 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 134 LDEATEPWGVEVERVEIKDVRLP 156
           +D  +E W    ER E+KD RLP
Sbjct: 556 MDSGSEHWPFMTERSELKD-RLP 577


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 191 KEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFLG 237
           K+  L  +D        +L +L S  A   +++ F +P+DF +  LG
Sbjct: 98  KQVFLGGVDKNTQFWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLG 144


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.135    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,874
Number of Sequences: 2123
Number of extensions: 5127
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 7
length of query: 257
length of database: 516,269
effective HSP length: 63
effective length of query: 194
effective length of database: 382,520
effective search space: 74208880
effective search space used: 74208880
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 47 (23.0 bits)