Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000439-TA|BGIBMGA000439-PA|IPR001107|Band 7 protein,
IPR001972|Stomatin
(257 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory ... 273 7e-74
U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein. 273 7e-74
U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein. 273 7e-74
U41021-3|AAV28352.1| 317|Caenorhabditis elegans Mechanosensory ... 269 1e-72
U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory ... 269 1e-72
Z66565-9|CAB76415.1| 281|Caenorhabditis elegans Hypothetical pr... 247 5e-66
AL032659-2|CAB82215.1| 281|Caenorhabditis elegans Hypothetical ... 247 5e-66
AL032659-1|CAA21750.1| 298|Caenorhabditis elegans Hypothetical ... 237 6e-63
U55375-2|AAC69044.2| 285|Caenorhabditis elegans Uncoordinated p... 225 2e-59
EF538426-1|ABQ08183.1| 289|Caenorhabditis elegans stomatin-like... 225 2e-59
AC006638-3|AAK85483.1| 367|Caenorhabditis elegans Stomatin prot... 220 9e-58
U40409-9|AAA81390.3| 314|Caenorhabditis elegans Stomatin protei... 217 5e-57
U29378-2|AAA68723.2| 330|Caenorhabditis elegans Stomatin protei... 217 8e-57
Z66564-4|CAA91476.1| 267|Caenorhabditis elegans Hypothetical pr... 188 5e-48
AC006638-4|AAP82654.1| 312|Caenorhabditis elegans Stomatin prot... 180 7e-46
AC006638-5|AAP82655.1| 175|Caenorhabditis elegans Stomatin prot... 135 3e-32
U42013-1|AAB06496.1| 415|Caenorhabditis elegans UNC-24 protein. 84 1e-16
AF045644-5|AAC02604.1| 415|Caenorhabditis elegans Uncoordinated... 84 1e-16
Z81072-4|CAB03018.2| 327|Caenorhabditis elegans Hypothetical pr... 79 3e-15
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 7.6
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 28 7.6
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 28 7.6
AL033514-25|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical... 27 10.0
>U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform a protein.
Length = 481
Score = 273 bits (670), Expect = 7e-74
Identities = 137/239 (57%), Positives = 165/239 (69%)
Query: 11 QVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEVLTRDSV 70
+VVQE+ERAVIF FF++PCIDTYRKVDLR +SF+VPPQE+L++DSV
Sbjct: 142 KVVQEYERAVIFRLGRLMPGGAKGPGIFFIVPCIDTYRKVDLRVLSFEVPPQEILSKDSV 201
Query: 71 TVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDREAISHMM 130
TVAVDAVVY+RI +V V D + ST+LLA TTLRN+LG + LA++LSDREAISH M
Sbjct: 202 TVAVDAVVYFRISNATISVTNVEDAARSTKLLAQTTLRNILGTKTLAEMLSDREAISHQM 261
Query: 131 QASLDEATEPWGVEVERVEIKDVRLPVQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 190
Q +LDEATEPWGV+VERVE+KDVRLPVQLQ L
Sbjct: 262 QTTLDEATEPWGVKVERVEVKDVRLPVQLQRAMAAEAEAAREARAKVIVAEGEQKASRAL 321
Query: 191 KEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFLGGAGPSTTHQPSV 249
KEA+ V+ ++P ALQLRYLQ+L+SISAEKNSTIIFPFP+D L AFL P PS+
Sbjct: 322 KEAAEVIAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLSAFLQRTPPKVEEPPSL 380
>U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 273 bits (670), Expect = 7e-74
Identities = 137/239 (57%), Positives = 165/239 (69%)
Query: 11 QVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEVLTRDSV 70
+VVQE+ERAVIF FF++PCIDTYRKVDLR +SF+VPPQE+L++DSV
Sbjct: 142 KVVQEYERAVIFRLGRLMPGGAKGPGIFFIVPCIDTYRKVDLRVLSFEVPPQEILSKDSV 201
Query: 71 TVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDREAISHMM 130
TVAVDAVVY+RI +V V D + ST+LLA TTLRN+LG + LA++LSDREAISH M
Sbjct: 202 TVAVDAVVYFRISNATISVTNVEDAARSTKLLAQTTLRNILGTKTLAEMLSDREAISHQM 261
Query: 131 QASLDEATEPWGVEVERVEIKDVRLPVQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 190
Q +LDEATEPWGV+VERVE+KDVRLPVQLQ L
Sbjct: 262 QTTLDEATEPWGVKVERVEVKDVRLPVQLQRAMAAEAEAAREARAKVIVAEGEQKASRAL 321
Query: 191 KEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFLGGAGPSTTHQPSV 249
KEA+ V+ ++P ALQLRYLQ+L+SISAEKNSTIIFPFP+D L AFL P PS+
Sbjct: 322 KEAAEVIAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLSAFLQRTPPKVEEPPSL 380
>U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 273 bits (670), Expect = 7e-74
Identities = 137/239 (57%), Positives = 165/239 (69%)
Query: 11 QVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEVLTRDSV 70
+VVQE+ERAVIF FF++PCIDTYRKVDLR +SF+VPPQE+L++DSV
Sbjct: 142 KVVQEYERAVIFRLGRLMPGGAKGPGIFFIVPCIDTYRKVDLRVLSFEVPPQEILSKDSV 201
Query: 71 TVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDREAISHMM 130
TVAVDAVVY+RI +V V D + ST+LLA TTLRN+LG + LA++LSDREAISH M
Sbjct: 202 TVAVDAVVYFRISNATISVTNVEDAARSTKLLAQTTLRNILGTKTLAEMLSDREAISHQM 261
Query: 131 QASLDEATEPWGVEVERVEIKDVRLPVQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 190
Q +LDEATEPWGV+VERVE+KDVRLPVQLQ L
Sbjct: 262 QTTLDEATEPWGVKVERVEVKDVRLPVQLQRAMAAEAEAAREARAKVIVAEGEQKASRAL 321
Query: 191 KEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFLGGAGPSTTHQPSV 249
KEA+ V+ ++P ALQLRYLQ+L+SISAEKNSTIIFPFP+D L AFL P PS+
Sbjct: 322 KEAAEVIAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLSAFLQRTPPKVEEPPSL 380
>U41021-3|AAV28352.1| 317|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform c protein.
Length = 317
Score = 269 bits (660), Expect = 1e-72
Identities = 135/231 (58%), Positives = 162/231 (70%)
Query: 11 QVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEVLTRDSV 70
+VVQE+ERAVIF FF++PCIDTYRKVDLR +SF+VPPQE+L++DSV
Sbjct: 67 KVVQEYERAVIFRLGRLMPGGAKGPGIFFIVPCIDTYRKVDLRVLSFEVPPQEILSKDSV 126
Query: 71 TVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDREAISHMM 130
TVAVDAVVY+RI +V V D + ST+LLA TTLRN+LG + LA++LSDREAISH M
Sbjct: 127 TVAVDAVVYFRISNATISVTNVEDAARSTKLLAQTTLRNILGTKTLAEMLSDREAISHQM 186
Query: 131 QASLDEATEPWGVEVERVEIKDVRLPVQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 190
Q +LDEATEPWGV+VERVE+KDVRLPVQLQ L
Sbjct: 187 QTTLDEATEPWGVKVERVEVKDVRLPVQLQRAMAAEAEAAREARAKVIVAEGEQKASRAL 246
Query: 191 KEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFLGGAGP 241
KEA+ V+ ++P ALQLRYLQ+L+SISAEKNSTIIFPFP+D L AFL P
Sbjct: 247 KEAAEVIAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLSAFLQRTPP 297
>U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform b protein.
Length = 392
Score = 269 bits (660), Expect = 1e-72
Identities = 135/231 (58%), Positives = 162/231 (70%)
Query: 11 QVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEVLTRDSV 70
+VVQE+ERAVIF FF++PCIDTYRKVDLR +SF+VPPQE+L++DSV
Sbjct: 142 KVVQEYERAVIFRLGRLMPGGAKGPGIFFIVPCIDTYRKVDLRVLSFEVPPQEILSKDSV 201
Query: 71 TVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDREAISHMM 130
TVAVDAVVY+RI +V V D + ST+LLA TTLRN+LG + LA++LSDREAISH M
Sbjct: 202 TVAVDAVVYFRISNATISVTNVEDAARSTKLLAQTTLRNILGTKTLAEMLSDREAISHQM 261
Query: 131 QASLDEATEPWGVEVERVEIKDVRLPVQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 190
Q +LDEATEPWGV+VERVE+KDVRLPVQLQ L
Sbjct: 262 QTTLDEATEPWGVKVERVEVKDVRLPVQLQRAMAAEAEAAREARAKVIVAEGEQKASRAL 321
Query: 191 KEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFLGGAGP 241
KEA+ V+ ++P ALQLRYLQ+L+SISAEKNSTIIFPFP+D L AFL P
Sbjct: 322 KEAAEVIAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDLLSAFLQRTPP 372
>Z66565-9|CAB76415.1| 281|Caenorhabditis elegans Hypothetical
protein Y71H9A.3 protein.
Length = 281
Score = 247 bits (605), Expect = 5e-66
Identities = 121/235 (51%), Positives = 160/235 (68%)
Query: 5 NAIFYNQVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEV 64
+A F +VVQE+ERAVIF FF++PCI++++K+DLR VSFDVPPQE+
Sbjct: 45 SAFFCLKVVQEYERAVIFRLGRLKHGGARGPGIFFIIPCIESFKKIDLRVVSFDVPPQEI 104
Query: 65 LTRDSVTVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDRE 124
L++DSVTV+VDAV+Y+RI +V+ V D + ST+LLA TTLRN LG R LA++LS R+
Sbjct: 105 LSKDSVTVSVDAVIYFRISNATVSVINVEDAARSTKLLAQTTLRNFLGTRTLAEMLSSRD 164
Query: 125 AISHMMQASLDEATEPWGVEVERVEIKDVRLPVQLQXXXXXXXXXXXXXXXXXXXXXXXX 184
AIS MQA+LDEAT+PWGV+VERVEIKDVRLP+QLQ
Sbjct: 165 AISMQMQAALDEATDPWGVKVERVEIKDVRLPIQLQRAMAAEAEAARAAGAKIIAAEGEQ 224
Query: 185 XXXXXLKEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFLGGA 239
L +A+ V+ +P A+QLRYLQ+L+SIS+EKN+TIIFPFP + + F+ A
Sbjct: 225 LASRALADAADVIATSPCAIQLRYLQTLNSISSEKNNTIIFPFPTELIAKFIQSA 279
>AL032659-2|CAB82215.1| 281|Caenorhabditis elegans Hypothetical
protein Y71H9A.3 protein.
Length = 281
Score = 247 bits (605), Expect = 5e-66
Identities = 121/235 (51%), Positives = 160/235 (68%)
Query: 5 NAIFYNQVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEV 64
+A F +VVQE+ERAVIF FF++PCI++++K+DLR VSFDVPPQE+
Sbjct: 45 SAFFCLKVVQEYERAVIFRLGRLKHGGARGPGIFFIIPCIESFKKIDLRVVSFDVPPQEI 104
Query: 65 LTRDSVTVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDRE 124
L++DSVTV+VDAV+Y+RI +V+ V D + ST+LLA TTLRN LG R LA++LS R+
Sbjct: 105 LSKDSVTVSVDAVIYFRISNATVSVINVEDAARSTKLLAQTTLRNFLGTRTLAEMLSSRD 164
Query: 125 AISHMMQASLDEATEPWGVEVERVEIKDVRLPVQLQXXXXXXXXXXXXXXXXXXXXXXXX 184
AIS MQA+LDEAT+PWGV+VERVEIKDVRLP+QLQ
Sbjct: 165 AISMQMQAALDEATDPWGVKVERVEIKDVRLPIQLQRAMAAEAEAARAAGAKIIAAEGEQ 224
Query: 185 XXXXXLKEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFLGGA 239
L +A+ V+ +P A+QLRYLQ+L+SIS+EKN+TIIFPFP + + F+ A
Sbjct: 225 LASRALADAADVIATSPCAIQLRYLQTLNSISSEKNNTIIFPFPTELIAKFIQSA 279
>AL032659-1|CAA21750.1| 298|Caenorhabditis elegans Hypothetical
protein Y71H9A.2 protein.
Length = 298
Score = 237 bits (580), Expect = 6e-63
Identities = 116/230 (50%), Positives = 155/230 (67%)
Query: 11 QVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEVLTRDSV 70
+V QE+ERAVIF FFV+PCID+Y+K+DLRT+SF+VPPQE+L++D+V
Sbjct: 56 KVAQEYERAVIFRLGRVKPGGARGPGLFFVVPCIDSYKKIDLRTLSFEVPPQELLSKDAV 115
Query: 71 TVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDREAISHMM 130
TVAVDAVV++RI +V+ + D + ST+LLA TTLRN+LG + L ++LSDR+ IS M
Sbjct: 116 TVAVDAVVFFRISNATISVINIEDAARSTKLLAQTTLRNILGTKTLTEMLSDRDVISLQM 175
Query: 131 QASLDEATEPWGVEVERVEIKDVRLPVQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 190
QA+LDE T PWGV+VERVE+KDVRLP QLQ L
Sbjct: 176 QATLDETTIPWGVKVERVEMKDVRLPYQLQRVMAAEAEATRDAMAKIIAAEGEKNASTAL 235
Query: 191 KEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFLGGAG 240
EA+ V+ +P A+QLRYLQ+L+SIS+EKN+TI+FPFPM+ + F+ G
Sbjct: 236 AEAADVISMSPCAIQLRYLQTLNSISSEKNNTIVFPFPMEMMSRFIKRQG 285
>U55375-2|AAC69044.2| 285|Caenorhabditis elegans Uncoordinated
protein 1 protein.
Length = 285
Score = 225 bits (551), Expect = 2e-59
Identities = 110/226 (48%), Positives = 149/226 (65%)
Query: 11 QVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEVLTRDSV 70
+V++E+ER VIF F++PCIDTYRK+DLR VS+ VPPQE+L++DSV
Sbjct: 56 KVIKEYERVVIFRIGRLVFGGARGPGMIFIIPCIDTYRKIDLRVVSYAVPPQEILSKDSV 115
Query: 71 TVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDREAISHMM 130
TV+VDAVVY+R +P+ +V V D ST+LLA TTLRN LGM+ L ++L++REAI+ +
Sbjct: 116 TVSVDAVVYFRTSDPIASVNNVDDAIYSTKLLAQTTLRNALGMKTLTEMLTEREAIAQLC 175
Query: 131 QASLDEATEPWGVEVERVEIKDVRLPVQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 190
+ LDE TE WGV+VERVE+KD+RLP QL L
Sbjct: 176 ETILDEGTEHWGVKVERVEVKDIRLPQQLTRAMAAEAEAAREARAKVVAAEGEQKASRAL 235
Query: 191 KEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFL 236
KEA+ V+ NP+ALQLR+LQ+L+SI+AE NSTI+FP P++ AF+
Sbjct: 236 KEAADVIQANPVALQLRHLQALNSIAAEHNSTIVFPVPVEMFGAFM 281
>EF538426-1|ABQ08183.1| 289|Caenorhabditis elegans stomatin-like
protein UNC-1 protein.
Length = 289
Score = 225 bits (551), Expect = 2e-59
Identities = 110/226 (48%), Positives = 149/226 (65%)
Query: 11 QVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEVLTRDSV 70
+V++E+ER VIF F++PCIDTYRK+DLR VS+ VPPQE+L++DSV
Sbjct: 60 KVIKEYERVVIFRIGRLVFGGARGPGMIFIIPCIDTYRKIDLRVVSYAVPPQEILSKDSV 119
Query: 71 TVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDREAISHMM 130
TV+VDAVVY+R +P+ +V V D ST+LLA TTLRN LGM+ L ++L++REAI+ +
Sbjct: 120 TVSVDAVVYFRTSDPIASVNNVDDAIYSTKLLAQTTLRNALGMKTLTEMLTEREAIAQLC 179
Query: 131 QASLDEATEPWGVEVERVEIKDVRLPVQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 190
+ LDE TE WGV+VERVE+KD+RLP QL L
Sbjct: 180 ETILDEGTEHWGVKVERVEVKDIRLPQQLTRAMAAEAEAAREARAKVVAAEGEQKASRAL 239
Query: 191 KEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFL 236
KEA+ V+ NP+ALQLR+LQ+L+SI+AE NSTI+FP P++ AF+
Sbjct: 240 KEAADVIQANPVALQLRHLQALNSIAAEHNSTIVFPVPVEMFGAFM 285
>AC006638-3|AAK85483.1| 367|Caenorhabditis elegans Stomatin protein
5, isoform a protein.
Length = 367
Score = 220 bits (537), Expect = 9e-58
Identities = 107/229 (46%), Positives = 149/229 (65%)
Query: 8 FYNQVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEVLTR 67
F +VV+E++RAVIF FFVLPCIDT + VDLR +SFDVPPQE+L+R
Sbjct: 132 FCVKVVKEYQRAVIFRLGRLIKGGTKGPGLFFVLPCIDTMKIVDLRVLSFDVPPQEILSR 191
Query: 68 DSVTVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDREAIS 127
DSVTV+V+AV+Y+R+ P+ +V V D STRLLA TTLRNVLG + L+++LS+R+AI+
Sbjct: 192 DSVTVSVEAVIYFRVSNPVISVTNVNDAQFSTRLLAQTTLRNVLGTKTLSEMLSERDAIA 251
Query: 128 HMMQASLDEATEPWGVEVERVEIKDVRLPVQLQXXXXXXXXXXXXXXXXXXXXXXXXXXX 187
+ + LDE T+PWGV+VERVEIKD+RLP QL
Sbjct: 252 SISEKVLDEGTDPWGVKVERVEIKDIRLPHQLMRSMAAKAEAVRRARAAIIAAQGEKDAS 311
Query: 188 XXLKEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFL 236
L+ A+ + N M +QLRYLQ+L+ ISA++N+TI+ P+P++ K ++
Sbjct: 312 ESLQTAADTIAQNKMTIQLRYLQTLTKISAQRNNTIVMPYPIEVAKHYM 360
>U40409-9|AAA81390.3| 314|Caenorhabditis elegans Stomatin protein 2
protein.
Length = 314
Score = 217 bits (531), Expect = 5e-57
Identities = 110/212 (51%), Positives = 138/212 (65%)
Query: 8 FYNQVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEVLTR 67
F +VVQE+ERAVIF FFVLPCI++Y KVDLRTVSF VPPQE+LT+
Sbjct: 91 FCMKVVQEYERAVIFRLGRLIGGGAKGPGIFFVLPCIESYTKVDLRTVSFSVPPQEILTK 150
Query: 68 DSVTVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDREAIS 127
DSVT +VDAV+YYRI +V V + STRLLA TTLRN+LG R L+++LSDRE ++
Sbjct: 151 DSVTTSVDAVIYYRISNATVSVANVENAHHSTRLLAQTTLRNMLGTRSLSEILSDRETLA 210
Query: 128 HMMQASLDEATEPWGVEVERVEIKDVRLPVQLQXXXXXXXXXXXXXXXXXXXXXXXXXXX 187
MQ LDEATE WG++VERVEIKDVRLP+QLQ
Sbjct: 211 ASMQTILDEATESWGIKVERVEIKDVRLPIQLQRAMAAEAEATREARAKVIAAEGEQKAS 270
Query: 188 XXLKEASLVMIDNPMALQLRYLQSLSSISAEK 219
L++A+ V+ +P ALQLRYLQ+L+S++ EK
Sbjct: 271 RALRDAASVIAQSPAALQLRYLQTLNSVAREK 302
>U29378-2|AAA68723.2| 330|Caenorhabditis elegans Stomatin protein 1
protein.
Length = 330
Score = 217 bits (529), Expect = 8e-57
Identities = 109/242 (45%), Positives = 157/242 (64%), Gaps = 2/242 (0%)
Query: 11 QVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEVLTRDSV 70
++VQE++RAV+F FF++PCIDT+ +DLR S++VP QE+L+RDSV
Sbjct: 65 KIVQEYQRAVVFRLGRLVPDVKGPGI-FFIIPCIDTFLNIDLRVASYNVPSQEILSRDSV 123
Query: 71 TVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDREAISHMM 130
TV+VDAVVY+++ +P+ +VV V + + ST+LLA TTLR +LG L+++LSDRE IS M
Sbjct: 124 TVSVDAVVYFKVFDPITSVVGVGNATDSTKLLAQTTLRTILGTHTLSEILSDREKISADM 183
Query: 131 QASLDEATEPWGVEVERVEIKDVRLPVQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 190
+ SLDEATEPWG++VERVE++DVRLP Q+Q L
Sbjct: 184 KISLDEATEPWGIKVERVELRDVRLPSQMQRAMAAEAEATRDAGAKIIAAEGELRASAAL 243
Query: 191 KEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLKAFLG-GAGPSTTHQPSV 249
EA+ ++ + A+QLRYL +L++IS+EK STIIFPFPM+ L G+G ++ + P
Sbjct: 244 AEAATIISKSEGAMQLRYLHTLNAISSEKTSTIIFPFPMEILGGISKVGSGGTSQNFPVQ 303
Query: 250 QM 251
+M
Sbjct: 304 EM 305
>Z66564-4|CAA91476.1| 267|Caenorhabditis elegans Hypothetical
protein F52D10.5 protein.
Length = 267
Score = 188 bits (457), Expect = 5e-48
Identities = 97/226 (42%), Positives = 135/226 (59%)
Query: 8 FYNQVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEVLTR 67
F ++V+E++R VIF VLP ID+++ VDLR +S+DVP QE+LTR
Sbjct: 37 FCVKIVKEYDRMVIFRLGRLWQDNPRGPGIVLVLPFIDSHKTVDLRVMSYDVPTQEMLTR 96
Query: 68 DSVTVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDREAIS 127
DSVT+ VDA VYYR +P+ ++ RV D STR LA ++LRNVLG R LA+L++DR I+
Sbjct: 97 DSVTIGVDAAVYYRTSDPIASLARVNDAHMSTRQLAQSSLRNVLGTRSLAELMTDRHGIA 156
Query: 128 HMMQASLDEATEPWGVEVERVEIKDVRLPVQLQXXXXXXXXXXXXXXXXXXXXXXXXXXX 187
++ LD AT WG+ VERVEIKD+RLP ++
Sbjct: 157 VQVKYILDSATLFWGIHVERVEIKDIRLPREMCRAMAAEAEAQRESDAKVVTAQGELDAS 216
Query: 188 XXLKEASLVMIDNPMALQLRYLQSLSSISAEKNSTIIFPFPMDFLK 233
++A+ + +P ALQLRYLQ+L ISA N TI+ PFPM+++K
Sbjct: 217 MAFQKAADELAGSPTALQLRYLQTLVKISAHDNHTIVVPFPMEYIK 262
>AC006638-4|AAP82654.1| 312|Caenorhabditis elegans Stomatin protein
5, isoform b protein.
Length = 312
Score = 180 bits (439), Expect = 7e-46
Identities = 87/152 (57%), Positives = 114/152 (75%)
Query: 8 FYNQVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEVLTR 67
F +VV+E++RAVIF FFVLPCIDT + VDLR +SFDVPPQE+L+R
Sbjct: 132 FCVKVVKEYQRAVIFRLGRLIKGGTKGPGLFFVLPCIDTMKIVDLRVLSFDVPPQEILSR 191
Query: 68 DSVTVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDREAIS 127
DSVTV+V+AV+Y+R+ P+ +V V D STRLLA TTLRNVLG + L+++LS+R+AI+
Sbjct: 192 DSVTVSVEAVIYFRVSNPVISVTNVNDAQFSTRLLAQTTLRNVLGTKTLSEMLSERDAIA 251
Query: 128 HMMQASLDEATEPWGVEVERVEIKDVRLPVQL 159
+ + LDE T+PWGV+VERVEIKD+RLP QL
Sbjct: 252 SISEKVLDEGTDPWGVKVERVEIKDIRLPHQL 283
>AC006638-5|AAP82655.1| 175|Caenorhabditis elegans Stomatin protein
5, isoform c protein.
Length = 175
Score = 135 bits (327), Expect = 3e-32
Identities = 66/120 (55%), Positives = 88/120 (73%)
Query: 8 FYNQVVQEFERAVIFXXXXXXXXXXXXXXXFFVLPCIDTYRKVDLRTVSFDVPPQEVLTR 67
F +VV+E++RAVIF FFVLPCIDT + VDLR +SFDVPPQE+L+R
Sbjct: 48 FCVKVVKEYQRAVIFRLGRLIKGGTKGPGLFFVLPCIDTMKIVDLRVLSFDVPPQEILSR 107
Query: 68 DSVTVAVDAVVYYRIKEPLNAVVRVADYSASTRLLAATTLRNVLGMRDLAQLLSDREAIS 127
DSVTV+V+AV+Y+R+ P+ +V V D STRLLA TTLRNVLG + L+++LS+R+AI+
Sbjct: 108 DSVTVSVEAVIYFRVSNPVISVTNVNDAQFSTRLLAQTTLRNVLGTKTLSEMLSERDAIA 167
>U42013-1|AAB06496.1| 415|Caenorhabditis elegans UNC-24 protein.
Length = 415
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 40 VLPCIDTYRKVDLRTVSFDVPPQEVLTRDSVTVAVDAVVYYRIKEPLNAVVRVADYSAST 99
V+PCIDT KV + +F+VPP +++T D V + A V+ +I++P+ AV V D +AS
Sbjct: 116 VIPCIDTTHKVTMSITAFNVPPLQIITTDRGLVELGATVFLKIRDPIAAVCGVQDRNASV 175
Query: 100 RLLAATTLRNVLGMRDLAQLLS--DREAISHMMQASLDEATEPWGVEVERVEIKDVRL 155
R LA T L + + + + S DR IS ++ L T +GVE+ VEI DV++
Sbjct: 176 RTLANTMLYRYISKKRICDVTSSQDRRIISANLKDELGSFTCQFGVEITDVEISDVKI 233
>AF045644-5|AAC02604.1| 415|Caenorhabditis elegans Uncoordinated
protein 24 protein.
Length = 415
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 40 VLPCIDTYRKVDLRTVSFDVPPQEVLTRDSVTVAVDAVVYYRIKEPLNAVVRVADYSAST 99
V+PCIDT KV + +F+VPP +++T D V + A V+ +I++P+ AV V D +AS
Sbjct: 116 VIPCIDTTHKVTMSITAFNVPPLQIITTDRGLVELGATVFLKIRDPIAAVCGVQDRNASV 175
Query: 100 RLLAATTLRNVLGMRDLAQLLS--DREAISHMMQASLDEATEPWGVEVERVEIKDVRL 155
R LA T L + + + + S DR IS ++ L T +GVE+ VEI DV++
Sbjct: 176 RTLANTMLYRYISKKRICDVTSSQDRRIISANLKDELGSFTCQFGVEITDVEISDVKI 233
>Z81072-4|CAB03018.2| 327|Caenorhabditis elegans Hypothetical
protein F30A10.5 protein.
Length = 327
Score = 79.0 bits (186), Expect = 3e-15
Identities = 40/126 (31%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Query: 39 FVLPCIDTYRKV-DLRTVSFDVPPQEVLTRDSVTVAVDAVVYYRIKEPLNAV---VRVAD 94
F+LP ID + V +LR ++ ++P Q +T D+V + +D V+Y R+ +P A V D
Sbjct: 65 FLLPIIDKIKFVQNLREIAIEIPEQGAITIDNVQLRLDGVLYLRVFDPYKACDASYGVDD 124
Query: 95 YSASTRLLAATTLRNVLGMRDLAQLLSDREAISHMMQASLDEATEPWGVEVERVEIKDVR 154
+ LA TT+R+ +G +L + +RE ++ + ++++A+ PWG++ R EI+D++
Sbjct: 125 PEFAVTQLAQTTMRSEVGKINLDTVFKERELLNENIVFAINKASAPWGIQCMRYEIRDMQ 184
Query: 155 LPVQLQ 160
+P ++Q
Sbjct: 185 MPSKIQ 190
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 103 AATTLRNVLGMRDLAQLLSDREAISHMMQASLDEATE 139
A+ T LG RD A++ D EA++ ++ L + TE
Sbjct: 805 ASRTKEKGLGKRDFAEIQKDYEALNTQVKQQLPKVTE 841
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 103 AATTLRNVLGMRDLAQLLSDREAISHMMQASLDEATE 139
A+ T LG RD A++ D EA++ ++ L + TE
Sbjct: 805 ASRTKEKGLGKRDFAEIQKDYEALNTQVKQQLPKVTE 841
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 103 AATTLRNVLGMRDLAQLLSDREAISHMMQASLDEATE 139
A+ T LG RD A++ D EA++ ++ L + TE
Sbjct: 805 ASRTKEKGLGKRDFAEIQKDYEALNTQVKQQLPKVTE 841
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 103 AATTLRNVLGMRDLAQLLSDREAISHMMQASLDEATE 139
A+ T LG RD A++ D EA++ ++ L + TE
Sbjct: 805 ASRTKEKGLGKRDFAEIQKDYEALNTQVKQQLPKVTE 841
>AL033514-25|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical
protein Y75B8A.24 protein.
Length = 2121
Score = 27.5 bits (58), Expect = 10.0
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 202 MALQLRYLQSLSSISAEKNS---TIIFPFPMDFLKAFLGGAGPSTTHQPS 248
M L L+S+ SA+ ++ ++IFP P+D K G G H+ S
Sbjct: 181 MCYALGLLRSIGRFSADYDTPLISLIFPLPVDETKKCKGAGGADIKHRIS 230
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.135 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,301,791
Number of Sequences: 27539
Number of extensions: 125727
Number of successful extensions: 293
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 249
Number of HSP's gapped (non-prelim): 24
length of query: 257
length of database: 12,573,161
effective HSP length: 80
effective length of query: 177
effective length of database: 10,370,041
effective search space: 1835497257
effective search space used: 1835497257
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 58 (27.5 bits)
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