Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000438-TA|BGIBMGA000438-PA|IPR000618|Insect cuticle
protein
         (210 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       24   0.77 
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   5.4  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   5.4  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   5.4  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   5.4  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   5.4  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   7.2  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    21   7.2  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 4/36 (11%)

Query: 152 KFQHEIRDGD-VVKGVYGL--HEADGSVRTVEYSSD 184
           K++ E R  D  + G YG+  H+ DGS+R V Y++D
Sbjct: 204 KYRVEERTSDGFIVGEYGVVSHD-DGSLRGVRYTAD 238


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)

Query: 92  HYTRPQEGFSFHRG 105
           HY  PQ    FHRG
Sbjct: 205 HYLSPQSRGLFHRG 218


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)

Query: 92  HYTRPQEGFSFHRG 105
           HY  PQ    FHRG
Sbjct: 205 HYLSPQSRGLFHRG 218


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)

Query: 92  HYTRPQEGFSFHRG 105
           HY  PQ    FHRG
Sbjct: 205 HYLSPQSRGLFHRG 218


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)

Query: 92  HYTRPQEGFSFHRG 105
           HY  PQ    FHRG
Sbjct: 205 HYLSPQSRGLFHRG 218


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)

Query: 92  HYTRPQEGFSFHRG 105
           HY  PQ    FHRG
Sbjct: 205 HYLSPQSRGLFHRG 218


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 67  HYPVHYPAPVQHEAPAAKPVYKPQVHYTRP 96
           HY  ++P P     PA  P+  P ++   P
Sbjct: 172 HYARYHPYPNFGVPPAGIPLQNPGLNLNPP 201


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
          protein 8 protein.
          Length = 99

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 32 DSQENSGERGIYQYVQEQNEDV 53
          DS++ +  R I +YVQ ++ DV
Sbjct: 68 DSRQVANARRIARYVQTKHPDV 89


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.131    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,730
Number of Sequences: 317
Number of extensions: 2272
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 210
length of database: 114,650
effective HSP length: 54
effective length of query: 156
effective length of database: 97,532
effective search space: 15214992
effective search space used: 15214992
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 41 (20.6 bits)